RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KLK12Q9UKR0 248 aa4.43□□□□□ -1.7
PSEN1-216ENST00000556066 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 TRBV7-3A0A075B6L6 115 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 TMEM262E9PQX1 116 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 IGLC6P0CF74 106 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 NTF3P20783 257 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 AMTP48728 403 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 RPS20P60866 119 aaKnown RBP4.42□□□□□ -1.7
PSEN1-216ENST00000556066 ZNF56Q15929 161 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 ZNF664Q8N3J9 261 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 RMI2Q96E14 147 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 COX11Q9Y6N1 276 aa4.42□□□□□ -1.7
PSEN1-216ENST00000556066 TRBV10-1A0A0K0K1A3 114 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 KRTDAPP60985 99 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 PKIAP61925 76 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 TWIST1Q15672 202 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 SPANXN1Q5VSR9 72 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 Q8N976 141 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 FER1L6-AS1Q8NA97 138 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 OR10AG1Q8NH19 301 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 BORCS7Q96B45 105 aa4.41□□□□□ -1.7
PSEN1-216ENST00000556066 A0A1B0GV72 72 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 LINC00614P0C842 121 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 C3orf79P0CE67 100 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 CTRLP40313 264 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 UBE2D3P61077 147 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 UBE2D2P62837 147 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 PMCHL1Q16048 86 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 MRPL51Q4U2R6 128 aaKnown RBP4.4□□□□□ -1.71
PSEN1-216ENST00000556066 FAM104BQ5XKR9 115 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 MTURNQ8N3F0 131 aa4.4□□□□□ -1.71
PSEN1-216ENST00000556066 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
PSEN1-216ENST00000556066 TRBV6-8A0A0A6YYG3 113 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 IGHV1-24A0A0C4DH33 117 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 LOC389332A0A1B0GUA5 103 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 SMKR1H3BMG3 65 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 CRPP02741 224 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 ANGP03950 147 aaKnown RBP4.39□□□□□ -1.71
PSEN1-216ENST00000556066 NPSP0C0P6 89 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 SMIM17P0DL12 118 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 LINC00173Q6ZV60 143 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 AMN1Q8IY45 258 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 CHCHD5Q9BSY4 110 aa4.39□□□□□ -1.71
PSEN1-216ENST00000556066 D6R8Y8 96 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 TSTD3H0UI37 97 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 GAS8-AS1O95177 125 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 NCR2O95944 276 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 SLPIP03973 132 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 MGPP08493 103 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 OR5AL1P0C617 328 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 DDTP30046 118 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 IFI27P40305 119 aaPredicted RBP4.38□□□□□ -1.71
PSEN1-216ENST00000556066 MPV17L2Q567V2 206 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 CLPSL2Q6UWE3 100 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 TEX43Q6ZNM6 134 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 Q6ZSA8 131 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 SCXQ7RTU7 201 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 CHCHD1Q96BP2 118 aaKnown RBP4.38□□□□□ -1.71
PSEN1-216ENST00000556066 RNF185Q96GF1 192 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 PRELID3AQ96N28 172 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 AP1S3Q96PC3 154 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 CHCHD7Q9BUK0 85 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 CNFNQ9BYD5 112 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 TMEM191AQ9H0A3 160 aa4.38□□□□□ -1.71
PSEN1-216ENST00000556066 ATP5LO75964 103 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 NPYP01303 97 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 CKS2P33552 79 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 GAGE6Q13070 117 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 ENHOQ6UWT2 76 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 Q75L30 129 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 MRPL52Q86TS9 123 aaKnown RBP4.37□□□□□ -1.71
PSEN1-216ENST00000556066 ATOH7Q8N100 152 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 PRSS3P2Q8NHM4 247 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 C14orf144Q96I85 54 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 CHAC1Q9BUX1 264 aa4.37□□□□□ -1.71
PSEN1-216ENST00000556066 TRBV25-1A0A075B6N4 114 aa4.36□□□□□ -1.71
PSEN1-216ENST00000556066 TMEM97Q5BJF2 176 aa4.36□□□□□ -1.71
PSEN1-216ENST00000556066 NTM-AS1Q6ZSK4 140 aa4.36□□□□□ -1.71
PSEN1-216ENST00000556066 FA2HQ7L5A8 372 aa4.36□□□□□ -1.71
PSEN1-216ENST00000556066 ORMDL3Q8N138 153 aa4.36□□□□□ -1.71
PSEN1-216ENST00000556066 LINC00269Q8N2A0 174 aa4.36□□□□□ -1.71
PSEN1-216ENST00000556066 VAMP8Q9BV40 100 aa4.36□□□□□ -1.71
PSEN1-216ENST00000556066 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
PSEN1-216ENST00000556066 IGLV10-54A0A075B6I4 117 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 A0A096LNJ9 63 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 SYS1-DBNDD2H3BUS1 97 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 H7C1H1 209 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 LEPROTL1O95214 131 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 PPBPP02775 128 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 SCGB1A1P11684 91 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 RBX1P62877 108 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 CACNG7P62955 275 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 TAL2Q16559 108 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 MIAQ16674 131 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 SPATA45Q537H7 98 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 SUMO4Q6EEV6 95 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 CIRBP-AS1Q8TBR5 109 aa4.35□□□□□ -1.71
PSEN1-216ENST00000556066 DEFB104AQ8WTQ1 72 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms