RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 UBE2D1P51668 147 aa5.06□□□□□ -1.6
TDP1-214ENST00000556063 LINC00310P59036 64 aa5.06□□□□□ -1.6
TDP1-214ENST00000556063 HERVK_113P63121 156 aa5.06□□□□□ -1.6
TDP1-214ENST00000556063 KRTAP26-1Q6PEX3 210 aa5.06□□□□□ -1.6
TDP1-214ENST00000556063 LINC00173Q6ZV60 143 aa5.06□□□□□ -1.6
TDP1-214ENST00000556063 PACRGQ96M98 296 aaPredicted RBP5.06□□□□□ -1.6
TDP1-214ENST00000556063 IGHV1-58A0A0C4DH39 117 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 LRCOL1A6NCL2 159 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 LECT2O14960 151 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 NUPR1O60356 82 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 FABP4P15090 132 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 FOXI1Q12951 378 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 LINC00242Q5T6M2 205 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 FAM19A3Q7Z5A8 133 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 C5orf38Q86SI9 138 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 MAPKAPK5-AS1Q8N8E1 139 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 NTN5Q8WTR8 489 aaPredicted RBP5.05□□□□□ -1.6
TDP1-214ENST00000556063 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 PGPEP1Q9NXJ5 209 aa5.05□□□□□ -1.6
TDP1-214ENST00000556063 TRAV12-1A0A0B4J245 112 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 IGHV3OR16-9A0A0B4J2B5 98 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 TINCRA0A1B0GVN0 87 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 hDV102S1A0JD36 115 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 H3BRM9 83 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 S100A2P29034 98 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 PLECQ15149 4684 aaKnown RBP5.04□□□□□ -1.6
TDP1-214ENST00000556063 ZC2HC1BQ5TFG8 222 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 CDPF1Q6NVV7 123 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 LINC01561Q8N1V8 128 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 Q8N814 137 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 MAP1LC3CQ9BXW4 147 aa5.04□□□□□ -1.6
TDP1-214ENST00000556063 A0A087WZ39 114 aa5.03□□□□□ -1.6
TDP1-214ENST00000556063 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.03□□□□□ -1.6
TDP1-214ENST00000556063 A0A0J9YXV3 536 aa5.03□□□□□ -1.6
TDP1-214ENST00000556063 ZNF561-AS1K7EIQ3 104 aa5.03□□□□□ -1.6
TDP1-214ENST00000556063 LINC00469Q8N7U9 141 aa5.03□□□□□ -1.6
TDP1-214ENST00000556063 CHAC1Q9BUX1 264 aa5.03□□□□□ -1.6
TDP1-214ENST00000556063 CHTOPQ9Y3Y2 248 aaKnown RBP5.03□□□□□ -1.6
TDP1-214ENST00000556063 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.02□□□□□ -1.61
TDP1-214ENST00000556063 GVQW2A0A096LPI5 108 aaPredicted RBP5.02□□□□□ -1.61
TDP1-214ENST00000556063 IGLV5-52A0A0A0MRZ9 124 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 F8VRH5 84 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 H0Y8G0 127 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 IGLC3P0DOY3 106 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 COX6A2Q02221 97 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 WFDC2Q14508 124 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 SPATA12Q7Z6I5 190 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 OR10D4PQ8NGN7 298 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 ORAOV1Q8WV07 137 aa5.02□□□□□ -1.61
TDP1-214ENST00000556063 IGHV3-64A0A075B6Q5 118 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 IGLV5-45A0A087WSX0 123 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 A0A1B0GVY2 172 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 F8WDY8 70 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 PRSS2P07478 247 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 SPAG11BQ08648 103 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 HIGD2BQ4VC39 106 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 C15orf56Q8N910 161 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 CDKN2A-AS1Q9UH64 79 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 PKIGQ9Y2B9 76 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 VPS13DQ5THJ4 4388 aa5.01□□□□□ -1.61
TDP1-214ENST00000556063 IGLV4-69A0A075B6H9 119 aa5□□□□□ -1.61
TDP1-214ENST00000556063 C20orf202A1L168 122 aa5□□□□□ -1.61
TDP1-214ENST00000556063 C16orf90A8MZG2 172 aa5□□□□□ -1.61
TDP1-214ENST00000556063 SYS1-DBNDD2H3BUS1 97 aa5□□□□□ -1.61
TDP1-214ENST00000556063 PLNP26678 52 aa5□□□□□ -1.61
TDP1-214ENST00000556063 AKR1D1P51857 326 aa5□□□□□ -1.61
TDP1-214ENST00000556063 ODF1Q14990 250 aa5□□□□□ -1.61
TDP1-214ENST00000556063 TMEM170BQ5T4T1 132 aa5□□□□□ -1.61
TDP1-214ENST00000556063 PET117Q6UWS5 81 aa5□□□□□ -1.61
TDP1-214ENST00000556063 C2orf48Q96LS8 159 aa5□□□□□ -1.61
TDP1-214ENST00000556063 MRPL35Q9NZE8 188 aaKnown RBP5□□□□□ -1.61
TDP1-214ENST00000556063 DNAH1Q9P2D7 4330 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 C11orf86A6NJI1 115 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 DPM2O94777 84 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 ZNF22P17026 224 aaPredicted RBP4.99□□□□□ -1.61
TDP1-214ENST00000556063 GCSHP23434 173 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 KRTDAPP60985 99 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 CKS1BP61024 79 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 SNRPEP62304 92 aaKnown RBP4.99□□□□□ -1.61
TDP1-214ENST00000556063 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
TDP1-214ENST00000556063 SYCNQ0VAF6 134 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 C6orf226Q5I0X4 101 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 HIST3H2BBQ8N257 126 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 CAMK2N2Q96S95 79 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 TOMM7Q9P0U1 55 aa4.99□□□□□ -1.61
TDP1-214ENST00000556063 KMT2AQ03164 3969 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 C5orf52A6NGY3 159 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 SMIM1B2RUZ4 78 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 NDUFA1O15239 70 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 IGKCP01834 107 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 SPINK8P0C7L1 97 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 CXCL5P42830 114 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 HERVK_113P61574 105 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 Q8IZM0 81 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 C9orf163Q8N9P6 203 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 CARD19Q96LW7 228 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
TDP1-214ENST00000556063 DNAH6Q9C0G6 4158 aa4.97□□□□□ -1.61
TDP1-214ENST00000556063 LYSTQ99698 3801 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms