RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 H3BT86 120 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 HIST2H2BDQ6DRA6 164 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 FAM19A3Q7Z5A8 133 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 PRIMA1Q86XR5 153 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 DAND5Q8N907 189 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 C16orf74Q96GX8 76 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 CCDC168Q8NDH2 2452 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 SETXQ7Z333 2677 aaKnown RBP5.01□□□□□ -1.61
TDP1-213ENST00000555880 BAHCC1Q9P281 2608 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 JMJD1CQ15652 2540 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 NF1P21359 2839 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 TRGV2A0A075B6R0 118 aa5□□□□□ -1.61
TDP1-213ENST00000555880 TRAV8-4A0A0B4J246 113 aa5□□□□□ -1.61
TDP1-213ENST00000555880 GAGE12JA6NER3 117 aa5□□□□□ -1.61
TDP1-213ENST00000555880 SNCGO76070 127 aa5□□□□□ -1.61
TDP1-213ENST00000555880 RNASE1P07998 156 aaKnown RBP5□□□□□ -1.61
TDP1-213ENST00000555880 HERV-K104P63124 156 aa5□□□□□ -1.61
TDP1-213ENST00000555880 COX6A2Q02221 97 aa5□□□□□ -1.61
TDP1-213ENST00000555880 GAGE4Q13068 117 aa5□□□□□ -1.61
TDP1-213ENST00000555880 GAGE5Q13069 117 aa5□□□□□ -1.61
TDP1-213ENST00000555880 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
TDP1-213ENST00000555880 LINC00308Q8TCZ7 52 aa5□□□□□ -1.61
TDP1-213ENST00000555880 TMEM243Q9BU79 118 aa5□□□□□ -1.61
TDP1-213ENST00000555880 NOP10Q9NPE3 64 aaKnown RBP5□□□□□ -1.61
TDP1-213ENST00000555880 TEX49A0A1B0GTD5 131 aa5□□□□□ -1.61
TDP1-213ENST00000555880 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
TDP1-213ENST00000555880 LST1O00453 97 aa5□□□□□ -1.61
TDP1-213ENST00000555880 LINC00694P0DN24 101 aa5□□□□□ -1.61
TDP1-213ENST00000555880 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5□□□□□ -1.61
TDP1-213ENST00000555880 CLEC2BQ92478 149 aa5□□□□□ -1.61
TDP1-213ENST00000555880 CITED2Q99967 270 aaPredicted RBP5□□□□□ -1.61
TDP1-213ENST00000555880 H7C423 109 aa4.99□□□□□ -1.61
TDP1-213ENST00000555880 ZNF625Q96I27 306 aaPredicted RBP4.99□□□□□ -1.61
TDP1-213ENST00000555880 CDC42SE2Q9NRR3 84 aa4.99□□□□□ -1.61
TDP1-213ENST00000555880 TRGV4A0A0C4DH28 118 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 A0A0U1RRA0 63 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 NTM-AS1Q6ZSK4 140 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 FAM110AQ9BQ89 295 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 C2CD3Q4AC94 2353 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 TRBV6-4A0A1B0GX49 114 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 GAGE7O76087 117 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 NDUFA7O95182 113 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 GAGE12FP0CL80 117 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 GAGE12GP0CL81 117 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 GAGE12IP0CL82 117 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 RPL35AP18077 110 aaKnown RBP4.98□□□□□ -1.61
TDP1-213ENST00000555880 ESM1Q9NQ30 184 aa4.98□□□□□ -1.61
TDP1-213ENST00000555880 HECTD1Q9ULT8 2610 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 F5H768 121 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 COX7A2LO14548 114 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 FLNBO75369 2602 aaKnown RBP4.97□□□□□ -1.61
TDP1-213ENST00000555880 GAGE2BQ13066 116 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 GAGE2EQ4V326 116 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 PPDPFQ9H3Y8 114 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 C16orf95Q9H693 158 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 GAGE2DQ9UEU5 116 aa4.97□□□□□ -1.61
TDP1-213ENST00000555880 IGLV1-51P01701 117 aa4.96□□□□□ -1.61
TDP1-213ENST00000555880 LINC01006Q8NI28 216 aa4.96□□□□□ -1.61
TDP1-213ENST00000555880 COX7B2Q8TF08 81 aa4.96□□□□□ -1.61
TDP1-213ENST00000555880 CITED1Q99966 193 aa4.96□□□□□ -1.61
TDP1-213ENST00000555880 MTORP42345 2549 aa4.96□□□□□ -1.62
TDP1-213ENST00000555880 FAM240AA0A1B0GVK7 77 aa4.96□□□□□ -1.62
TDP1-213ENST00000555880 GIG44P09565 113 aaPredicted RBP4.96□□□□□ -1.62
TDP1-213ENST00000555880 MRPL23Q16540 153 aaKnown RBP4.96□□□□□ -1.62
TDP1-213ENST00000555880 OVOL2Q9BRP0 275 aa4.96□□□□□ -1.62
TDP1-213ENST00000555880 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.62
TDP1-213ENST00000555880 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
TDP1-213ENST00000555880 PLAC8L1A1L4L8 177 aa4.95□□□□□ -1.62
TDP1-213ENST00000555880 CRPP02741 224 aa4.95□□□□□ -1.62
TDP1-213ENST00000555880 PF4P02776 101 aa4.95□□□□□ -1.62
TDP1-213ENST00000555880 GAGE6Q13070 117 aa4.95□□□□□ -1.62
TDP1-213ENST00000555880 C15orf53Q8NAA6 179 aa4.95□□□□□ -1.62
TDP1-213ENST00000555880 CHCHD5Q9BSY4 110 aa4.95□□□□□ -1.62
TDP1-213ENST00000555880 WFDC10AQ9H1F0 79 aa4.95□□□□□ -1.62
TDP1-213ENST00000555880 TRBV6-8A0A0A6YYG3 113 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 IGKV3OR2-268A0A0C4DH90 116 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 LOC100131303A0A0U1RQF7 123 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 TRACP01848 142 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 TTC32Q5I0X7 151 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 DEFB121Q5J5C9 76 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 SOSTDC1Q6X4U4 206 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 TOMM7Q9P0U1 55 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 ACYP1P07311 99 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 KRTAP1-1Q07627 177 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 FAM222AQ5U5X8 452 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 Q6Q795 121 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 CSNK1G2-AS1Q8NCQ2 148 aa4.94□□□□□ -1.62
TDP1-213ENST00000555880 ACANP16112 2415 aa4.93□□□□□ -1.62
TDP1-213ENST00000555880 LINC00158P58513 81 aa4.93□□□□□ -1.62
TDP1-213ENST00000555880 FHL2Q14192 279 aa4.93□□□□□ -1.62
TDP1-213ENST00000555880 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
TDP1-213ENST00000555880 C19orf73Q9NVV2 129 aa4.93□□□□□ -1.62
TDP1-213ENST00000555880 NBPF19A0A087WUL8 3843 aa4.93□□□□□ -1.62
TDP1-213ENST00000555880 TRAV26-1A0A087WT03 109 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 CRLF1O75462 422 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 NDUFV3P56181 108 aaKnown RBP4.92□□□□□ -1.62
TDP1-213ENST00000555880 HILS1P60008 231 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 MIR7-3HGQ8N6C7 128 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms