RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 LINC01546A6NGU7 62 aa14.76□□□□□ -0.05
CDKN3-208ENST00000555837 ERASQ7Z444 233 aa14.76□□□□□ -0.05
CDKN3-208ENST00000555837 DPH3Q96FX2 82 aa14.76□□□□□ -0.05
CDKN3-208ENST00000555837 LINC00474Q9P2X8 69 aa14.76□□□□□ -0.05
CDKN3-208ENST00000555837 IGIPA6NJ69 53 aa14.75□□□□□ -0.05
CDKN3-208ENST00000555837 PLA2G1BP04054 148 aaKnown RBP14.75□□□□□ -0.05
CDKN3-208ENST00000555837 SCXQ7RTU7 201 aa14.75□□□□□ -0.05
CDKN3-208ENST00000555837 C5orf38Q86SI9 138 aa14.75□□□□□ -0.05
CDKN3-208ENST00000555837 C2orf48Q96LS8 159 aa14.75□□□□□ -0.05
CDKN3-208ENST00000555837 CARD19Q96LW7 228 aa14.75□□□□□ -0.05
CDKN3-208ENST00000555837 SCGB3A1Q96QR1 104 aa14.75□□□□□ -0.05
CDKN3-208ENST00000555837 HSPG2P98160 4391 aa14.74□□□□□ -0.05
CDKN3-208ENST00000555837 IGHV3OR16-9A0A0B4J2B5 98 aa14.74□□□□□ -0.05
CDKN3-208ENST00000555837 SYCNQ0VAF6 134 aa14.74□□□□□ -0.05
CDKN3-208ENST00000555837 Q5VSD8 79 aa14.74□□□□□ -0.05
CDKN3-208ENST00000555837 APOBP04114 4563 aaKnown RBP14.74□□□□□ -0.05
CDKN3-208ENST00000555837 FAM104AQ969W3 186 aa14.73□□□□□ -0.05
CDKN3-208ENST00000555837 AMELXQ99217 191 aa14.73□□□□□ -0.05
CDKN3-208ENST00000555837 SMR3BP02814 79 aaPredicted RBP14.72□□□□□ -0.05
CDKN3-208ENST00000555837 SLPIP03973 132 aa14.72□□□□□ -0.05
CDKN3-208ENST00000555837 LINC01561Q8N1V8 128 aa14.72□□□□□ -0.05
CDKN3-208ENST00000555837 CIRBP-AS1Q8TBR5 109 aa14.72□□□□□ -0.05
CDKN3-208ENST00000555837 CAMK2N2Q96S95 79 aa14.72□□□□□ -0.05
CDKN3-208ENST00000555837 IGLV4-69A0A075B6H9 119 aa14.71□□□□□ -0.05
CDKN3-208ENST00000555837 UBE2D1P51668 147 aa14.71□□□□□ -0.05
CDKN3-208ENST00000555837 A0A087WZ39 114 aa14.7□□□□□ -0.06
CDKN3-208ENST00000555837 LINC00614P0C842 121 aa14.7□□□□□ -0.06
CDKN3-208ENST00000555837 SPAG11BQ08648 103 aa14.7□□□□□ -0.06
CDKN3-208ENST00000555837 LINC00242Q5T6M2 205 aa14.7□□□□□ -0.06
CDKN3-208ENST00000555837 HERVK_113P63121 156 aa14.69□□□□□ -0.06
CDKN3-208ENST00000555837 HAMPP81172 84 aa14.69□□□□□ -0.06
CDKN3-208ENST00000555837 ORAOV1Q8WV07 137 aa14.69□□□□□ -0.06
CDKN3-208ENST00000555837 GEMIN7Q9H840 131 aaKnown RBP14.69□□□□□ -0.06
CDKN3-208ENST00000555837 COX6A2Q02221 97 aa14.68□□□□□ -0.06
CDKN3-208ENST00000555837 CIRBPQ14011 172 aaKnown RBP14.68□□□□□ -0.06
CDKN3-208ENST00000555837 FAM19A3Q7Z5A8 133 aa14.68□□□□□ -0.06
CDKN3-208ENST00000555837 SLC7A5P1Q8MH63 180 aa14.68□□□□□ -0.06
CDKN3-208ENST00000555837 C18orf32Q8TCD1 76 aa14.68□□□□□ -0.06
CDKN3-208ENST00000555837 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.67□□□□□ -0.06
CDKN3-208ENST00000555837 LINC00528Q8N1L1 170 aa14.67□□□□□ -0.06
CDKN3-208ENST00000555837 RNF151Q2KHN1 245 aa14.66□□□□□ -0.06
CDKN3-208ENST00000555837 LOC107984640A0A0U1RRK4 108 aa14.65□□□□□ -0.06
CDKN3-208ENST00000555837 NDUFA1O15239 70 aa14.65□□□□□ -0.06
CDKN3-208ENST00000555837 PACRGQ96M98 296 aaPredicted RBP14.65□□□□□ -0.06
CDKN3-208ENST00000555837 SPACA4Q8TDM5 124 aa14.64□□□□□ -0.07
CDKN3-208ENST00000555837 YPEL4Q96NS1 127 aa14.64□□□□□ -0.07
CDKN3-208ENST00000555837 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.64□□□□□ -0.07
CDKN3-208ENST00000555837 HBDP02042 147 aa14.63□□□□□ -0.07
CDKN3-208ENST00000555837 PRSS2P07478 247 aa14.63□□□□□ -0.07
CDKN3-208ENST00000555837 LINC00173Q6ZV60 143 aa14.63□□□□□ -0.07
CDKN3-208ENST00000555837 LINC00526Q96FQ7 95 aa14.63□□□□□ -0.07
CDKN3-208ENST00000555837 PMVKQ15126 192 aa14.62□□□□□ -0.07
CDKN3-208ENST00000555837 CBLN2Q8IUK8 224 aa14.62□□□□□ -0.07
CDKN3-208ENST00000555837 MRPL35Q9NZE8 188 aaKnown RBP14.62□□□□□ -0.07
CDKN3-208ENST00000555837 ATP5LO75964 103 aa14.61□□□□□ -0.07
CDKN3-208ENST00000555837 INAFM2P0DMQ5 153 aa14.61□□□□□ -0.07
CDKN3-208ENST00000555837 MAJINQ3KP22 176 aa14.61□□□□□ -0.07
CDKN3-208ENST00000555837 Q6ZRU5 148 aa14.61□□□□□ -0.07
CDKN3-208ENST00000555837 CHCHD1Q96BP2 118 aaKnown RBP14.61□□□□□ -0.07
CDKN3-208ENST00000555837 KRTAP4-5Q9BYR2 181 aa14.61□□□□□ -0.07
CDKN3-208ENST00000555837 IGKV2-24A0A0C4DH68 120 aa14.6□□□□□ -0.07
CDKN3-208ENST00000555837 A0A087WYN8 130 aa14.59□□□□□ -0.07
CDKN3-208ENST00000555837 TINCRA0A1B0GVN0 87 aa14.59□□□□□ -0.07
CDKN3-208ENST00000555837 C7orf33Q8WU49 177 aa14.59□□□□□ -0.07
CDKN3-208ENST00000555837 CST9LQ9H4G1 147 aa14.58□□□□□ -0.08
CDKN3-208ENST00000555837 PLAC8Q9NZF1 115 aa14.58□□□□□ -0.08
CDKN3-208ENST00000555837 CKS1BP61024 79 aa14.57□□□□□ -0.08
CDKN3-208ENST00000555837 C6orf226Q5I0X4 101 aa14.57□□□□□ -0.08
CDKN3-208ENST00000555837 ZC2HC1BQ5TFG8 222 aa14.57□□□□□ -0.08
CDKN3-208ENST00000555837 TRBV30A0A0K0K1B3 111 aa14.56□□□□□ -0.08
CDKN3-208ENST00000555837 H3BRM9 83 aa14.56□□□□□ -0.08
CDKN3-208ENST00000555837 CHTF8P0CG12 524 aa14.56□□□□□ -0.08
CDKN3-208ENST00000555837 LINC00469Q8N7U9 141 aa14.56□□□□□ -0.08
CDKN3-208ENST00000555837 STPG4Q8N801 248 aa14.56□□□□□ -0.08
CDKN3-208ENST00000555837 DNAH8Q96JB1 4490 aa14.55□□□□□ -0.08
CDKN3-208ENST00000555837 A0A096LNI7 61 aa14.55□□□□□ -0.08
CDKN3-208ENST00000555837 PTTG1IPP53801 180 aa14.55□□□□□ -0.08
CDKN3-208ENST00000555837 BAGE3Q86Y29 109 aa14.55□□□□□ -0.08
CDKN3-208ENST00000555837 Q8IZM0 81 aa14.55□□□□□ -0.08
CDKN3-208ENST00000555837 KRTAP17-1Q9BYP8 105 aa14.55□□□□□ -0.08
CDKN3-208ENST00000555837 A0A0J9YXV3 536 aa14.54□□□□□ -0.08
CDKN3-208ENST00000555837 CXCL5P42830 114 aa14.54□□□□□ -0.08
CDKN3-208ENST00000555837 NDUFA6P56556 154 aa14.54□□□□□ -0.08
CDKN3-208ENST00000555837 RPL37AP61513 92 aaKnown RBP14.54□□□□□ -0.08
CDKN3-208ENST00000555837 CDKN2A-AS1Q9UH64 79 aa14.54□□□□□ -0.08
CDKN3-208ENST00000555837 PANO1I0J062 215 aa14.53□□□□□ -0.08
CDKN3-208ENST00000555837 RPL18AQ02543 176 aaKnown RBP14.53□□□□□ -0.08
CDKN3-208ENST00000555837 GAGE2BQ13066 116 aa14.53□□□□□ -0.08
CDKN3-208ENST00000555837 TOMM7Q9P0U1 55 aa14.53□□□□□ -0.08
CDKN3-208ENST00000555837 HSBP1O75506 76 aa14.52□□□□□ -0.09
CDKN3-208ENST00000555837 TLX1NBP0CAT3 122 aa14.52□□□□□ -0.09
CDKN3-208ENST00000555837 PDZD11Q5EBL8 140 aa14.52□□□□□ -0.09
CDKN3-208ENST00000555837 TRGC2P03986 189 aa14.51□□□□□ -0.09
CDKN3-208ENST00000555837 KIAA0087Q14695 138 aa14.51□□□□□ -0.09
CDKN3-208ENST00000555837 URB1-AS1Q96HZ7 61 aa14.51□□□□□ -0.09
CDKN3-208ENST00000555837 IGLV5-45A0A087WSX0 123 aa14.5□□□□□ -0.09
CDKN3-208ENST00000555837 UNQ6190/PRO20217Q6UXQ8 127 aa14.5□□□□□ -0.09
CDKN3-208ENST00000555837 A0A096LNJ9 63 aa14.49□□□□□ -0.09
CDKN3-208ENST00000555837 PMCHL1Q16048 86 aa14.47□□□□□ -0.09
CDKN3-208ENST00000555837 PCLOQ9Y6V0 5065 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms