RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 Q96MF0 132 aa12.7□□□□□ -0.38
RCCD1-204ENST00000555737 C5orf38Q86SI9 138 aa12.69□□□□□ -0.38
RCCD1-204ENST00000555737 PEMTQ9UBM1 199 aa12.69□□□□□ -0.38
RCCD1-204ENST00000555737 CLPSL2Q6UWE3 100 aa12.69□□□□□ -0.38
RCCD1-204ENST00000555737 HIVEP2P31629 2446 aa12.69□□□□□ -0.38
RCCD1-204ENST00000555737 SLPIP03973 132 aa12.69□□□□□ -0.38
RCCD1-204ENST00000555737 FLNAP21333 2647 aaKnown RBP12.68□□□□□ -0.38
RCCD1-204ENST00000555737 NOTCH2Q04721 2471 aa12.68□□□□□ -0.38
RCCD1-204ENST00000555737 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
RCCD1-204ENST00000555737 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
RCCD1-204ENST00000555737 CRPP02741 224 aa12.67□□□□□ -0.38
RCCD1-204ENST00000555737 TIRAPP58753 221 aa12.67□□□□□ -0.38
RCCD1-204ENST00000555737 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
RCCD1-204ENST00000555737 C1orf158Q8N1D5 194 aa12.67□□□□□ -0.38
RCCD1-204ENST00000555737 KLK5Q9Y337 293 aaPredicted RBP12.67□□□□□ -0.38
RCCD1-204ENST00000555737 IGKV3D-7A0A0C4DH55 119 aa12.67□□□□□ -0.38
RCCD1-204ENST00000555737 DNAL4O96015 105 aa12.67□□□□□ -0.38
RCCD1-204ENST00000555737 C14orf132Q9NPU4 83 aa12.67□□□□□ -0.38
RCCD1-204ENST00000555737 A0A096LPF7 62 aa12.66□□□□□ -0.38
RCCD1-204ENST00000555737 K7EQD1 137 aa12.65□□□□□ -0.38
RCCD1-204ENST00000555737 KRTAP10-9P60411 292 aa12.65□□□□□ -0.38
RCCD1-204ENST00000555737 SND1-IT1Q9HBX3 110 aa12.65□□□□□ -0.38
RCCD1-204ENST00000555737 PAX4O43316 350 aa12.65□□□□□ -0.38
RCCD1-204ENST00000555737 C9orf129Q5T035 196 aaKnown RBP12.65□□□□□ -0.38
RCCD1-204ENST00000555737 C9orf153Q5TBE3 101 aa12.65□□□□□ -0.38
RCCD1-204ENST00000555737 SDIM1Q6ZPB5 146 aa12.65□□□□□ -0.39
RCCD1-204ENST00000555737 Q6Q795 121 aa12.64□□□□□ -0.39
RCCD1-204ENST00000555737 Q6YL49 198 aa12.64□□□□□ -0.39
RCCD1-204ENST00000555737 DNAJC30Q96LL9 226 aa12.64□□□□□ -0.39
RCCD1-204ENST00000555737 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
RCCD1-204ENST00000555737 LINC00337Q8N6G1 96 aa12.63□□□□□ -0.39
RCCD1-204ENST00000555737 CDC42SE2Q9NRR3 84 aa12.63□□□□□ -0.39
RCCD1-204ENST00000555737 ZNF469Q96JG9 3925 aaPredicted RBP12.63□□□□□ -0.39
RCCD1-204ENST00000555737 A0A087WYN8 130 aa12.63□□□□□ -0.39
RCCD1-204ENST00000555737 TIMM17BO60830 172 aa12.63□□□□□ -0.39
RCCD1-204ENST00000555737 IGLV5-39A0A0G2JS06 123 aa12.63□□□□□ -0.39
RCCD1-204ENST00000555737 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
RCCD1-204ENST00000555737 ITPR3Q14573 2671 aa12.62□□□□□ -0.39
RCCD1-204ENST00000555737 EDA2RQ9HAV5 297 aa12.62□□□□□ -0.39
RCCD1-204ENST00000555737 DEFB130BP0DP73 79 aa12.62□□□□□ -0.39
RCCD1-204ENST00000555737 DEFB130AP0DP74 79 aa12.62□□□□□ -0.39
RCCD1-204ENST00000555737 PRORYQ9H606 182 aa12.62□□□□□ -0.39
RCCD1-204ENST00000555737 MRPL23Q16540 153 aaKnown RBP12.61□□□□□ -0.39
RCCD1-204ENST00000555737 IGLV4-60A0A075B6I1 120 aa12.61□□□□□ -0.39
RCCD1-204ENST00000555737 APCP25054 2843 aa12.61□□□□□ -0.39
RCCD1-204ENST00000555737 LECT2O14960 151 aa12.61□□□□□ -0.39
RCCD1-204ENST00000555737 IGLV5-45A0A087WSX0 123 aa12.6□□□□□ -0.39
RCCD1-204ENST00000555737 NBPF19A0A087WUL8 3843 aa12.6□□□□□ -0.39
RCCD1-204ENST00000555737 NCR3O14931 201 aa12.59□□□□□ -0.39
RCCD1-204ENST00000555737 BEAN1Q3B7T3 259 aa12.59□□□□□ -0.39
RCCD1-204ENST00000555737 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
RCCD1-204ENST00000555737 MALP21145 153 aa12.59□□□□□ -0.39
RCCD1-204ENST00000555737 HIST2H2BCQ6DN03 193 aa12.59□□□□□ -0.39
RCCD1-204ENST00000555737 SMIM11BQ8TCY0 68 aa12.59□□□□□ -0.39
RCCD1-204ENST00000555737 A0A087WVE0 104 aa12.59□□□□□ -0.39
RCCD1-204ENST00000555737 F5H768 121 aa12.59□□□□□ -0.39
RCCD1-204ENST00000555737 FAM240AA0A1B0GVK7 77 aa12.58□□□□□ -0.4
RCCD1-204ENST00000555737 XCL1P47992 114 aa12.58□□□□□ -0.4
RCCD1-204ENST00000555737 PRR3P79522 188 aaKnown RBP12.58□□□□□ -0.4
RCCD1-204ENST00000555737 CSDC2Q9Y534 153 aaKnown RBP12.58□□□□□ -0.4
RCCD1-204ENST00000555737 IGHV4-31P0DP07 118 aa12.58□□□□□ -0.4
RCCD1-204ENST00000555737 LINC00643Q86TS7 51 aa12.56□□□□□ -0.4
RCCD1-204ENST00000555737 IGKV2-28A0A075B6P5 120 aa12.56□□□□□ -0.4
RCCD1-204ENST00000555737 LOC107984640A0A0U1RRK4 108 aa12.56□□□□□ -0.4
RCCD1-204ENST00000555737 IGKV2D-28P01615 120 aa12.56□□□□□ -0.4
RCCD1-204ENST00000555737 TRBV7-7A0A0K0K1E9 115 aa12.55□□□□□ -0.4
RCCD1-204ENST00000555737 C5orf47Q569G3 176 aa12.55□□□□□ -0.4
RCCD1-204ENST00000555737 C6orf226Q5I0X4 101 aa12.55□□□□□ -0.4
RCCD1-204ENST00000555737 C4orf3Q8WVX3 66 aa12.55□□□□□ -0.4
RCCD1-204ENST00000555737 COPS9Q8WXC6 57 aa12.55□□□□□ -0.4
RCCD1-204ENST00000555737 CCL18P55774 89 aa12.55□□□□□ -0.4
RCCD1-204ENST00000555737 ESM1Q9NQ30 184 aa12.55□□□□□ -0.4
RCCD1-204ENST00000555737 DEFB121Q5J5C9 76 aa12.54□□□□□ -0.4
RCCD1-204ENST00000555737 C22orf24Q9Y442 160 aa12.54□□□□□ -0.4
RCCD1-204ENST00000555737 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
RCCD1-204ENST00000555737 TRACP01848 142 aa12.54□□□□□ -0.4
RCCD1-204ENST00000555737 CCL24O00175 119 aa12.53□□□□□ -0.4
RCCD1-204ENST00000555737 HIST1H4AP62805 103 aaKnown RBP12.53□□□□□ -0.4
RCCD1-204ENST00000555737 DSCR9P59020 149 aa12.53□□□□□ -0.4
RCCD1-204ENST00000555737 WFDC9Q8NEX5 89 aa12.53□□□□□ -0.4
RCCD1-204ENST00000555737 ACYP1P07311 99 aa12.52□□□□□ -0.41
RCCD1-204ENST00000555737 IGLV10-54A0A075B6I4 117 aa12.52□□□□□ -0.41
RCCD1-204ENST00000555737 hADV29S1A0JD25 119 aa12.51□□□□□ -0.41
RCCD1-204ENST00000555737 J3QLI3 93 aa12.51□□□□□ -0.41
RCCD1-204ENST00000555737 INAFM2P0DMQ5 153 aa12.51□□□□□ -0.41
RCCD1-204ENST00000555737 RNF152Q8N8N0 203 aa12.51□□□□□ -0.41
RCCD1-204ENST00000555737 LINC01600Q96MT4 127 aa12.51□□□□□ -0.41
RCCD1-204ENST00000555737 CR1P17927 2039 aa12.5□□□□□ -0.41
RCCD1-204ENST00000555737 A0A096LNT2 108 aa12.49□□□□□ -0.41
RCCD1-204ENST00000555737 LINC00846Q9NV44 126 aa12.49□□□□□ -0.41
RCCD1-204ENST00000555737 TRBV10-1A0A0K0K1A3 114 aa12.49□□□□□ -0.41
RCCD1-204ENST00000555737 C3orf22Q8N5N4 141 aa12.49□□□□□ -0.41
RCCD1-204ENST00000555737 DEFB4AO15263 64 aa12.48□□□□□ -0.41
RCCD1-204ENST00000555737 A8MTW9 85 aa12.48□□□□□ -0.41
RCCD1-204ENST00000555737 A0A1B0GX51 115 aa12.47□□□□□ -0.41
RCCD1-204ENST00000555737 RPL28P46779 137 aaKnown RBP12.47□□□□□ -0.41
RCCD1-204ENST00000555737 USP24Q9UPU5 2620 aa12.46□□□□□ -0.41
RCCD1-204ENST00000555737 SMIM9A6NGZ8 99 aa12.45□□□□□ -0.42
RCCD1-204ENST00000555737 TRAV25A0A0B4J276 109 aa12.45□□□□□ -0.42
RCCD1-204ENST00000555737 C9orf116Q5BN46 136 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms