RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 COX7A2LO14548 114 aa7.56□□□□□ -1.2
SHMT2-220ENST00000555634 A0A0J9YXV3 536 aa7.55□□□□□ -1.2
SHMT2-220ENST00000555634 LINC00242Q5T6M2 205 aa7.55□□□□□ -1.2
SHMT2-220ENST00000555634 ZC2HC1BQ5TFG8 222 aa7.55□□□□□ -1.2
SHMT2-220ENST00000555634 CFAP161Q6P656 301 aa7.55□□□□□ -1.2
SHMT2-220ENST00000555634 ENHOQ6UWT2 76 aa7.55□□□□□ -1.2
SHMT2-220ENST00000555634 FAM19A3Q7Z5A8 133 aa7.55□□□□□ -1.2
SHMT2-220ENST00000555634 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
SHMT2-220ENST00000555634 LCE6AA0A183 80 aa7.54□□□□□ -1.2
SHMT2-220ENST00000555634 GAGE12HA6NDE8 117 aa7.54□□□□□ -1.2
SHMT2-220ENST00000555634 M0R2N4 97 aa7.54□□□□□ -1.2
SHMT2-220ENST00000555634 PRSS2P07478 247 aa7.54□□□□□ -1.2
SHMT2-220ENST00000555634 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
SHMT2-220ENST00000555634 IGLV4-69A0A075B6H9 119 aa7.53□□□□□ -1.2
SHMT2-220ENST00000555634 C11orf86A6NJI1 115 aa7.53□□□□□ -1.2
SHMT2-220ENST00000555634 SMIM6P0DI80 62 aa7.53□□□□□ -1.2
SHMT2-220ENST00000555634 S100A12P80511 92 aa7.53□□□□□ -1.2
SHMT2-220ENST00000555634 JOSD1Q15040 202 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-220ENST00000555634 C1orf134Q5TEV5 83 aa7.53□□□□□ -1.2
SHMT2-220ENST00000555634 C6orf223Q8N319 242 aa7.53□□□□□ -1.2
SHMT2-220ENST00000555634 FAM104AQ969W3 186 aa7.53□□□□□ -1.2
SHMT2-220ENST00000555634 IGLV5-45A0A087WSX0 123 aa7.52□□□□□ -1.21
SHMT2-220ENST00000555634 C14orf177Q52M58 125 aa7.52□□□□□ -1.21
SHMT2-220ENST00000555634 LINC01561Q8N1V8 128 aa7.52□□□□□ -1.21
SHMT2-220ENST00000555634 VAMP8Q9BV40 100 aa7.52□□□□□ -1.21
SHMT2-220ENST00000555634 DNAH7Q8WXX0 4024 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 A0A087WZ39 114 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 IGHV1-58A0A0C4DH39 117 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 EREGO14944 169 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 ZNF22P17026 224 aaPredicted RBP7.51□□□□□ -1.21
SHMT2-220ENST00000555634 FOXI1Q12951 378 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 SFTA2Q6UW10 78 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 ATOH7Q8N100 152 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 KRTAP1-5Q9BYS1 174 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 CDKN2A-AS1Q9UH64 79 aa7.51□□□□□ -1.21
SHMT2-220ENST00000555634 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
SHMT2-220ENST00000555634 Q6ZR54 194 aa7.5□□□□□ -1.21
SHMT2-220ENST00000555634 C5orf38Q86SI9 138 aa7.5□□□□□ -1.21
SHMT2-220ENST00000555634 ORAOV1Q8WV07 137 aa7.5□□□□□ -1.21
SHMT2-220ENST00000555634 PLEKHB2Q96CS7 222 aa7.5□□□□□ -1.21
SHMT2-220ENST00000555634 ZNF561-AS1K7EIQ3 104 aa7.49□□□□□ -1.21
SHMT2-220ENST00000555634 SPINK8P0C7L1 97 aa7.49□□□□□ -1.21
SHMT2-220ENST00000555634 LGALS3P17931 250 aaKnown RBP7.49□□□□□ -1.21
SHMT2-220ENST00000555634 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
SHMT2-220ENST00000555634 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
SHMT2-220ENST00000555634 CXCL5P42830 114 aa7.48□□□□□ -1.21
SHMT2-220ENST00000555634 CKS1BP61024 79 aa7.48□□□□□ -1.21
SHMT2-220ENST00000555634 COX6A2Q02221 97 aa7.48□□□□□ -1.21
SHMT2-220ENST00000555634 SPAG11BQ08648 103 aa7.48□□□□□ -1.21
SHMT2-220ENST00000555634 TOMM7Q9P0U1 55 aa7.48□□□□□ -1.21
SHMT2-220ENST00000555634 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
SHMT2-220ENST00000555634 IGHV3-64A0A075B6Q5 118 aa7.47□□□□□ -1.21
SHMT2-220ENST00000555634 hDV102S1A0JD36 115 aa7.47□□□□□ -1.21
SHMT2-220ENST00000555634 SMIM1B2RUZ4 78 aa7.47□□□□□ -1.21
SHMT2-220ENST00000555634 E9PLD3 99 aa7.47□□□□□ -1.21
SHMT2-220ENST00000555634 NMUP48645 174 aa7.47□□□□□ -1.21
SHMT2-220ENST00000555634 COX7B2Q8TF08 81 aa7.47□□□□□ -1.21
SHMT2-220ENST00000555634 USP17L23D6RBM5 183 aa7.46□□□□□ -1.22
SHMT2-220ENST00000555634 LEPROTO15243 131 aa7.46□□□□□ -1.22
SHMT2-220ENST00000555634 C6orf226Q5I0X4 101 aa7.46□□□□□ -1.22
SHMT2-220ENST00000555634 PYY3Q5JQD4 70 aa7.46□□□□□ -1.22
SHMT2-220ENST00000555634 Q8IZM0 81 aa7.46□□□□□ -1.22
SHMT2-220ENST00000555634 PKIGQ9Y2B9 76 aa7.46□□□□□ -1.22
SHMT2-220ENST00000555634 GVQW2A0A096LPI5 108 aaPredicted RBP7.45□□□□□ -1.22
SHMT2-220ENST00000555634 F8WDY8 70 aa7.45□□□□□ -1.22
SHMT2-220ENST00000555634 SPATA45Q537H7 98 aa7.45□□□□□ -1.22
SHMT2-220ENST00000555634 PAM16Q9Y3D7 125 aa7.45□□□□□ -1.22
SHMT2-220ENST00000555634 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.44□□□□□ -1.22
SHMT2-220ENST00000555634 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
SHMT2-220ENST00000555634 J3QQQ9 107 aa7.44□□□□□ -1.22
SHMT2-220ENST00000555634 NDUFA1O15239 70 aa7.44□□□□□ -1.22
SHMT2-220ENST00000555634 STPG4Q8N801 248 aa7.44□□□□□ -1.22
SHMT2-220ENST00000555634 CAMK2N2Q96S95 79 aa7.44□□□□□ -1.22
SHMT2-220ENST00000555634 DYNC2H1Q8NCM8 4307 aaKnown RBP7.43□□□□□ -1.22
SHMT2-220ENST00000555634 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
SHMT2-220ENST00000555634 LINC00587B1AMM8 73 aa7.43□□□□□ -1.22
SHMT2-220ENST00000555634 LECT2O14960 151 aa7.43□□□□□ -1.22
SHMT2-220ENST00000555634 HERV-K104P63124 156 aa7.43□□□□□ -1.22
SHMT2-220ENST00000555634 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
SHMT2-220ENST00000555634 KRTAP26-1Q6PEX3 210 aa7.43□□□□□ -1.22
SHMT2-220ENST00000555634 ZNF815PA8K554 130 aa7.42□□□□□ -1.22
SHMT2-220ENST00000555634 GCSHP23434 173 aa7.42□□□□□ -1.22
SHMT2-220ENST00000555634 SCGB1D4Q6XE38 83 aa7.42□□□□□ -1.22
SHMT2-220ENST00000555634 LINC00336Q6ZUF6 198 aa7.42□□□□□ -1.22
SHMT2-220ENST00000555634 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
SHMT2-220ENST00000555634 C2orf48Q96LS8 159 aa7.42□□□□□ -1.22
SHMT2-220ENST00000555634 NDUFA12Q9UI09 145 aa7.42□□□□□ -1.22
SHMT2-220ENST00000555634 CIRBPQ14011 172 aaKnown RBP7.41□□□□□ -1.22
SHMT2-220ENST00000555634 Q6ZRN7 208 aaPredicted RBP7.41□□□□□ -1.22
SHMT2-220ENST00000555634 CARD19Q96LW7 228 aa7.41□□□□□ -1.22
SHMT2-220ENST00000555634 C12orf57Q99622 126 aa7.41□□□□□ -1.22
SHMT2-220ENST00000555634 TSTD3H0UI37 97 aa7.4□□□□□ -1.22
SHMT2-220ENST00000555634 ANKRD39Q53RE8 183 aa7.4□□□□□ -1.22
SHMT2-220ENST00000555634 MEIG1Q5JSS6 88 aa7.4□□□□□ -1.22
SHMT2-220ENST00000555634 HYDINQ4G0P3 5121 aa7.39□□□□□ -1.23
SHMT2-220ENST00000555634 TRBV30A0A0K0K1B3 111 aa7.39□□□□□ -1.23
SHMT2-220ENST00000555634 SYCNQ0VAF6 134 aa7.39□□□□□ -1.23
SHMT2-220ENST00000555634 MAJINQ3KP22 176 aa7.39□□□□□ -1.23
SHMT2-220ENST00000555634 Q8N814 137 aa7.39□□□□□ -1.23
SHMT2-220ENST00000555634 NTN5Q8WTR8 489 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms