RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 UBE2V1Q13404 147 aa12.76□□□□□ -0.37
GABRB3-209ENST00000555632 NDUFA12Q9UI09 145 aa12.76□□□□□ -0.37
GABRB3-209ENST00000555632 SPANXB1Q9NS25 103 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-209ENST00000555632 MGAM2Q2M2H8 2515 aa12.75□□□□□ -0.37
GABRB3-209ENST00000555632 SMIM1B2RUZ4 78 aa12.75□□□□□ -0.37
GABRB3-209ENST00000555632 TMEM262E9PQX1 116 aa12.75□□□□□ -0.37
GABRB3-209ENST00000555632 SAMD5Q5TGI4 173 aa12.75□□□□□ -0.37
GABRB3-209ENST00000555632 Q8N3U1 123 aa12.74□□□□□ -0.37
GABRB3-209ENST00000555632 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
GABRB3-209ENST00000555632 ZFAND6Q6FIF0 208 aa12.73□□□□□ -0.37
GABRB3-209ENST00000555632 LITAFQ99732 161 aa12.73□□□□□ -0.37
GABRB3-209ENST00000555632 RBX1P62877 108 aa12.73□□□□□ -0.37
GABRB3-209ENST00000555632 A0A1B0GWB2 263 aa12.72□□□□□ -0.37
GABRB3-209ENST00000555632 ADAMTSL4-AS1Q5T5F5 129 aa12.72□□□□□ -0.37
GABRB3-209ENST00000555632 CLPSL2Q6UWE3 100 aa12.71□□□□□ -0.38
GABRB3-209ENST00000555632 A0A1W2PPM0 123 aa12.7□□□□□ -0.38
GABRB3-209ENST00000555632 IGLL5B9A064 214 aa12.69□□□□□ -0.38
GABRB3-209ENST00000555632 APOMO95445 188 aa12.69□□□□□ -0.38
GABRB3-209ENST00000555632 MUSTN1Q8IVN3 82 aa12.69□□□□□ -0.38
GABRB3-209ENST00000555632 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
GABRB3-209ENST00000555632 Q6ZTC4 211 aa12.68□□□□□ -0.38
GABRB3-209ENST00000555632 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
GABRB3-209ENST00000555632 HUWE1Q7Z6Z7 4374 aaKnown RBP12.68□□□□□ -0.38
GABRB3-209ENST00000555632 LINC00959A0A1B0GUT2 108 aa12.68□□□□□ -0.38
GABRB3-209ENST00000555632 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
GABRB3-209ENST00000555632 MRPL23Q16540 153 aaKnown RBP12.68□□□□□ -0.38
GABRB3-209ENST00000555632 Q9H8V8 135 aa12.68□□□□□ -0.38
GABRB3-209ENST00000555632 IGHV3OR16-9A0A0B4J2B5 98 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 A0A0J9YWU9 116 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 EIF4EBP3O60516 100 aaPredicted RBP12.67□□□□□ -0.38
GABRB3-209ENST00000555632 CFC1BP0CG36 223 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 CFC1P0CG37 223 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 TMEM238LA0A1B0GVL6 79 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 A6NJY4 79 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 NDUFA1O15239 70 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 DAND5Q8N907 189 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 MDFIQ99750 246 aa12.67□□□□□ -0.38
GABRB3-209ENST00000555632 A4D1N5 150 aa12.66□□□□□ -0.38
GABRB3-209ENST00000555632 NPC2P61916 151 aa12.66□□□□□ -0.38
GABRB3-209ENST00000555632 ICOSQ9Y6W8 199 aa12.66□□□□□ -0.38
GABRB3-209ENST00000555632 GAGE10A6NGK3 116 aa12.65□□□□□ -0.38
GABRB3-209ENST00000555632 PRSS2P07478 247 aa12.65□□□□□ -0.38
GABRB3-209ENST00000555632 C5orf38Q86SI9 138 aa12.65□□□□□ -0.38
GABRB3-209ENST00000555632 TEX48A0A1B0GUV7 120 aa12.64□□□□□ -0.39
GABRB3-209ENST00000555632 XCL1P47992 114 aa12.64□□□□□ -0.39
GABRB3-209ENST00000555632 LINC00269Q8N2A0 174 aa12.64□□□□□ -0.39
GABRB3-209ENST00000555632 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
GABRB3-209ENST00000555632 A0A0U1RRA0 63 aa12.64□□□□□ -0.39
GABRB3-209ENST00000555632 C11orf68Q9H3H3 251 aaKnown RBP12.64□□□□□ -0.39
GABRB3-209ENST00000555632 SPCS1Q9Y6A9 102 aa12.64□□□□□ -0.39
GABRB3-209ENST00000555632 K7EIL1 84 aa12.63□□□□□ -0.39
GABRB3-209ENST00000555632 K7EP34 96 aa12.63□□□□□ -0.39
GABRB3-209ENST00000555632 FABP2P12104 132 aa12.63□□□□□ -0.39
GABRB3-209ENST00000555632 NANOS2P60321 138 aaKnown RBP12.63□□□□□ -0.39
GABRB3-209ENST00000555632 SFTA2Q6UW10 78 aa12.62□□□□□ -0.39
GABRB3-209ENST00000555632 MRAPQ8TCY5 172 aa12.62□□□□□ -0.39
GABRB3-209ENST00000555632 TOMM7Q9P0U1 55 aa12.62□□□□□ -0.39
GABRB3-209ENST00000555632 A0A087WZ39 114 aa12.61□□□□□ -0.39
GABRB3-209ENST00000555632 TSPAN13O95857 204 aa12.61□□□□□ -0.39
GABRB3-209ENST00000555632 ANGP03950 147 aaKnown RBP12.61□□□□□ -0.39
GABRB3-209ENST00000555632 MIAQ16674 131 aa12.61□□□□□ -0.39
GABRB3-209ENST00000555632 SPANXDQ9BXN6 97 aa12.61□□□□□ -0.39
GABRB3-209ENST00000555632 SPANXCQ9NY87 97 aa12.61□□□□□ -0.39
GABRB3-209ENST00000555632 KPRPQ5T749 579 aaPredicted RBP12.61□□□□□ -0.39
GABRB3-209ENST00000555632 LELP1Q5T871 98 aa12.61□□□□□ -0.39
GABRB3-209ENST00000555632 LYPD5Q6UWN5 251 aa12.61□□□□□ -0.39
GABRB3-209ENST00000555632 IGLV10-54A0A075B6I4 117 aa12.59□□□□□ -0.39
GABRB3-209ENST00000555632 RPL24P83731 157 aaKnown RBP12.59□□□□□ -0.39
GABRB3-209ENST00000555632 DEFB121Q5J5C9 76 aa12.59□□□□□ -0.39
GABRB3-209ENST00000555632 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
GABRB3-209ENST00000555632 SS18Q15532 418 aa12.59□□□□□ -0.39
GABRB3-209ENST00000555632 GTF2H5Q6ZYL4 71 aa12.59□□□□□ -0.39
GABRB3-209ENST00000555632 REG3AQ06141 175 aa12.58□□□□□ -0.4
GABRB3-209ENST00000555632 COL7A1Q02388 2944 aa12.58□□□□□ -0.4
GABRB3-209ENST00000555632 TIMM17BO60830 172 aa12.58□□□□□ -0.4
GABRB3-209ENST00000555632 C11orf45Q8TAV5 145 aa12.58□□□□□ -0.4
GABRB3-209ENST00000555632 SH2D6Q7Z4S9 175 aa12.57□□□□□ -0.4
GABRB3-209ENST00000555632 PRO1854Q9UHT4 67 aa12.57□□□□□ -0.4
GABRB3-209ENST00000555632 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
GABRB3-209ENST00000555632 CHCHD10Q8WYQ3 142 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-209ENST00000555632 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
GABRB3-209ENST00000555632 H7C2G1 150 aa12.54□□□□□ -0.4
GABRB3-209ENST00000555632 CIRBPQ14011 172 aaKnown RBP12.54□□□□□ -0.4
GABRB3-209ENST00000555632 SOSTDC1Q6X4U4 206 aa12.54□□□□□ -0.4
GABRB3-209ENST00000555632 TM2D3Q9BRN9 247 aa12.54□□□□□ -0.4
GABRB3-209ENST00000555632 A0A0B4J2C4 111 aa12.53□□□□□ -0.4
GABRB3-209ENST00000555632 H3BNG1 76 aa12.53□□□□□ -0.4
GABRB3-209ENST00000555632 WFDC10BQ8IUB3 73 aa12.53□□□□□ -0.4
GABRB3-209ENST00000555632 KLK12Q9UKR0 248 aa12.53□□□□□ -0.4
GABRB3-209ENST00000555632 H3BMG7 143 aa12.53□□□□□ -0.4
GABRB3-209ENST00000555632 IGHV3-33P01772 117 aa12.53□□□□□ -0.4
GABRB3-209ENST00000555632 LINC00308Q8TCZ7 52 aa12.53□□□□□ -0.4
GABRB3-209ENST00000555632 LOC107984156A0A0G2JMH3 177 aa12.52□□□□□ -0.4
GABRB3-209ENST00000555632 HERV-K104P63124 156 aa12.52□□□□□ -0.4
GABRB3-209ENST00000555632 ARL17AQ8IVW1 177 aa12.52□□□□□ -0.4
GABRB3-209ENST00000555632 SPATA25Q9BR10 227 aa12.52□□□□□ -0.4
GABRB3-209ENST00000555632 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.41
GABRB3-209ENST00000555632 DNAH9Q9NYC9 4486 aa12.51□□□□□ -0.41
GABRB3-209ENST00000555632 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.51□□□□□ -0.41
GABRB3-209ENST00000555632 ESRGQ1W209 222 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms