RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 COX6A2Q02221 97 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 REG3AQ06141 175 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 FAM19A3Q7Z5A8 133 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 LINC00469Q8N7U9 141 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 LINC01556Q5JQF7 62 aa6.56□□□□□ -1.36
HNRNPC-220ENST00000555585 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
HNRNPC-220ENST00000555585 MUC7Q8TAX7 377 aa6.56□□□□□ -1.36
HNRNPC-220ENST00000555585 WWC2-AS2Q96NR7 200 aa6.56□□□□□ -1.36
HNRNPC-220ENST00000555585 KRTAP4-12Q9BQ66 201 aa6.56□□□□□ -1.36
HNRNPC-220ENST00000555585 TMEM223A0PJW6 202 aa6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 H3BRM9 83 aa6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 CCL25O15444 150 aa6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 DNAH10OSP0CZ25 163 aa6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 NMUP48645 174 aa6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 UBE2WQ96B02 151 aa6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 UPK3BQ9BT76 320 aa6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-220ENST00000555585 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 IGLV10-54A0A075B6I4 117 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 IGHV3-64A0A075B6Q5 118 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 TSTD3H0UI37 97 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 SPINK8P0C7L1 97 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 XCL1P47992 114 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 ENHOQ6UWT2 76 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 C14orf144Q96I85 54 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 Q9H8V8 135 aa6.54□□□□□ -1.36
HNRNPC-220ENST00000555585 STAB2Q8WWQ8 2551 aa6.53□□□□□ -1.36
HNRNPC-220ENST00000555585 IGLV5-45A0A087WSX0 123 aa6.53□□□□□ -1.36
HNRNPC-220ENST00000555585 IGKV2D-26A0A0A0MRZ7 120 aa6.53□□□□□ -1.36
HNRNPC-220ENST00000555585 E9PLD3 99 aa6.53□□□□□ -1.36
HNRNPC-220ENST00000555585 LEPROTO15243 131 aa6.53□□□□□ -1.36
HNRNPC-220ENST00000555585 CHCHD10Q8WYQ3 142 aaPredicted RBP6.53□□□□□ -1.36
HNRNPC-220ENST00000555585 PRR34Q9NV39 138 aa6.53□□□□□ -1.36
HNRNPC-220ENST00000555585 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
HNRNPC-220ENST00000555585 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
HNRNPC-220ENST00000555585 PCP4L1A6NKN8 68 aa6.52□□□□□ -1.37
HNRNPC-220ENST00000555585 MIAQ16674 131 aa6.52□□□□□ -1.37
HNRNPC-220ENST00000555585 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
HNRNPC-220ENST00000555585 FBN3Q75N90 2809 aa6.52□□□□□ -1.37
HNRNPC-220ENST00000555585 TRAV8-4A0A0B4J246 113 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 IGHV3OR16-9A0A0B4J2B5 98 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 IGHV1-58A0A0C4DH39 117 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 COX8AP10176 69 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 LGALS3P17931 250 aaKnown RBP6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 SLC25A34Q6PIV7 304 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 C10orf126Q8N4M7 172 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 Q9HAA7 133 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
HNRNPC-220ENST00000555585 IGKV2D-24A0A075B6R9 120 aa6.5□□□□□ -1.37
HNRNPC-220ENST00000555585 IBA57-AS1B1ANH7 110 aa6.5□□□□□ -1.37
HNRNPC-220ENST00000555585 SMIM1B2RUZ4 78 aa6.5□□□□□ -1.37
HNRNPC-220ENST00000555585 J3QQQ9 107 aa6.5□□□□□ -1.37
HNRNPC-220ENST00000555585 COX7A2LO14548 114 aa6.5□□□□□ -1.37
HNRNPC-220ENST00000555585 MIEN1Q9BRT3 115 aa6.5□□□□□ -1.37
HNRNPC-220ENST00000555585 C1orf43Q9BWL3 253 aa6.5□□□□□ -1.37
HNRNPC-220ENST00000555585 TTTY13Q9BZ97 58 aa6.5□□□□□ -1.37
HNRNPC-220ENST00000555585 A0A087WZ39 114 aa6.49□□□□□ -1.37
HNRNPC-220ENST00000555585 MALP21145 153 aa6.49□□□□□ -1.37
HNRNPC-220ENST00000555585 TSPEAR-AS2P59090 65 aa6.49□□□□□ -1.37
HNRNPC-220ENST00000555585 FOXI1Q12951 378 aa6.49□□□□□ -1.37
HNRNPC-220ENST00000555585 MAPKAPK5-AS1Q8N8E1 139 aa6.49□□□□□ -1.37
HNRNPC-220ENST00000555585 TOMM7Q9P0U1 55 aa6.49□□□□□ -1.37
HNRNPC-220ENST00000555585 IGLV5-39A0A0G2JS06 123 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 MYMXA0A1B0GTQ4 84 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 C3orf84H3BNL1 204 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 K7EP13 123 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 HNRNPA3P51991 378 aaKnown RBP6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 BOD1L2Q8IYS8 172 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 LINC01561Q8N1V8 128 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 RMI2Q96E14 147 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 TP73-AS1Q9UF72 201 aa6.48□□□□□ -1.37
HNRNPC-220ENST00000555585 DLEU1O43261 78 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 APOMO95445 188 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 PRSS2P07478 247 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 DDTP30046 118 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 CASC10Q5T4H9 136 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 COX7B2Q8TF08 81 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 ORAOV1Q8WV07 137 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 CSMD3Q7Z407 3707 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 STARD9Q9P2P6 4700 aa6.47□□□□□ -1.37
HNRNPC-220ENST00000555585 TTC32Q5I0X7 151 aa6.46□□□□□ -1.38
HNRNPC-220ENST00000555585 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
HNRNPC-220ENST00000555585 NDUFA12Q9UI09 145 aa6.46□□□□□ -1.38
HNRNPC-220ENST00000555585 PLECQ15149 4684 aaKnown RBP6.46□□□□□ -1.38
HNRNPC-220ENST00000555585 NBDYA0A0U1RRE5 68 aa6.45□□□□□ -1.38
HNRNPC-220ENST00000555585 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
HNRNPC-220ENST00000555585 CFAP161Q6P656 301 aa6.45□□□□□ -1.38
HNRNPC-220ENST00000555585 KRTAP26-1Q6PEX3 210 aa6.45□□□□□ -1.38
HNRNPC-220ENST00000555585 SCGB1D4Q6XE38 83 aa6.45□□□□□ -1.38
HNRNPC-220ENST00000555585 KRTAP1-5Q9BYS1 174 aa6.45□□□□□ -1.38
HNRNPC-220ENST00000555585 NDUFA1O15239 70 aa6.44□□□□□ -1.38
HNRNPC-220ENST00000555585 LY6G6CO95867 125 aa6.44□□□□□ -1.38
HNRNPC-220ENST00000555585 TM2D2Q9BX73 214 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms