RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 ORMDL2Q53FV1 153 aa9.53□□□□□ -0.88
XRCC3-210ENST00000554974 ZNF664Q8N3J9 261 aa9.53□□□□□ -0.88
XRCC3-210ENST00000554974 AP5S1Q9NUS5 200 aa9.53□□□□□ -0.88
XRCC3-210ENST00000554974 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.89
XRCC3-210ENST00000554974 ODF1Q14990 250 aa9.52□□□□□ -0.89
XRCC3-210ENST00000554974 PYGO1Q9Y3Y4 419 aa9.52□□□□□ -0.89
XRCC3-210ENST00000554974 MRPS36P82909 103 aaKnown RBP9.51□□□□□ -0.89
XRCC3-210ENST00000554974 Q6ZUT4 128 aa9.51□□□□□ -0.89
XRCC3-210ENST00000554974 COLCA2A8K830 154 aa9.5□□□□□ -0.89
XRCC3-210ENST00000554974 CFAP161Q6P656 301 aa9.5□□□□□ -0.89
XRCC3-210ENST00000554974 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
XRCC3-210ENST00000554974 PRSS3P2Q8NHM4 247 aa9.5□□□□□ -0.89
XRCC3-210ENST00000554974 C18orf32Q8TCD1 76 aa9.5□□□□□ -0.89
XRCC3-210ENST00000554974 CYSLTR1Q9Y271 337 aa9.5□□□□□ -0.89
XRCC3-210ENST00000554974 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
XRCC3-210ENST00000554974 C15orf56Q8N910 161 aa9.49□□□□□ -0.89
XRCC3-210ENST00000554974 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
XRCC3-210ENST00000554974 IGKV3OR2-268A0A0C4DH90 116 aa9.48□□□□□ -0.89
XRCC3-210ENST00000554974 CCL25O15444 150 aa9.48□□□□□ -0.89
XRCC3-210ENST00000554974 NPSP0C0P6 89 aa9.48□□□□□ -0.89
XRCC3-210ENST00000554974 G0S2P27469 103 aa9.48□□□□□ -0.89
XRCC3-210ENST00000554974 COX6A2Q02221 97 aa9.48□□□□□ -0.89
XRCC3-210ENST00000554974 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
XRCC3-210ENST00000554974 CHCHD10Q8WYQ3 142 aaPredicted RBP9.48□□□□□ -0.89
XRCC3-210ENST00000554974 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
XRCC3-210ENST00000554974 TNXBP22105 4242 aa9.48□□□□□ -0.89
XRCC3-210ENST00000554974 IGLV4-3A0A075B6K6 122 aa9.47□□□□□ -0.89
XRCC3-210ENST00000554974 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
XRCC3-210ENST00000554974 GAGE12HA6NDE8 117 aa9.47□□□□□ -0.89
XRCC3-210ENST00000554974 IGIPA6NJ69 53 aa9.47□□□□□ -0.89
XRCC3-210ENST00000554974 HIGD2BQ4VC39 106 aa9.47□□□□□ -0.89
XRCC3-210ENST00000554974 TOMM6Q96B49 74 aa9.47□□□□□ -0.89
XRCC3-210ENST00000554974 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
XRCC3-210ENST00000554974 SCO1O75880 301 aa9.46□□□□□ -0.9
XRCC3-210ENST00000554974 PRR3P79522 188 aaKnown RBP9.46□□□□□ -0.9
XRCC3-210ENST00000554974 FOXI1Q12951 378 aa9.46□□□□□ -0.9
XRCC3-210ENST00000554974 MAJINQ3KP22 176 aa9.46□□□□□ -0.9
XRCC3-210ENST00000554974 RNASE13Q5GAN3 156 aaKnown RBP9.46□□□□□ -0.9
XRCC3-210ENST00000554974 FA2HQ7L5A8 372 aa9.46□□□□□ -0.9
XRCC3-210ENST00000554974 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
XRCC3-210ENST00000554974 C1orf196B1AJZ1 125 aa9.45□□□□□ -0.9
XRCC3-210ENST00000554974 SS18Q15532 418 aa9.45□□□□□ -0.9
XRCC3-210ENST00000554974 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
XRCC3-210ENST00000554974 TIMM17AQ99595 171 aa9.45□□□□□ -0.9
XRCC3-210ENST00000554974 TRGC2P03986 189 aa9.44□□□□□ -0.9
XRCC3-210ENST00000554974 LINC00614P0C842 121 aa9.44□□□□□ -0.9
XRCC3-210ENST00000554974 XCL1P47992 114 aa9.44□□□□□ -0.9
XRCC3-210ENST00000554974 CD164L2Q6UWJ8 174 aa9.44□□□□□ -0.9
XRCC3-210ENST00000554974 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
XRCC3-210ENST00000554974 AMELXQ99217 191 aa9.44□□□□□ -0.9
XRCC3-210ENST00000554974 A0A096LNJ9 63 aa9.43□□□□□ -0.9
XRCC3-210ENST00000554974 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
XRCC3-210ENST00000554974 RAB5BP61020 215 aa9.43□□□□□ -0.9
XRCC3-210ENST00000554974 LINC00173Q6ZV60 143 aa9.43□□□□□ -0.9
XRCC3-210ENST00000554974 ERASQ7Z444 233 aa9.43□□□□□ -0.9
XRCC3-210ENST00000554974 IFITM10A6NMD0 228 aa9.42□□□□□ -0.9
XRCC3-210ENST00000554974 S100A1P23297 94 aa9.42□□□□□ -0.9
XRCC3-210ENST00000554974 STPG4Q8N801 248 aa9.42□□□□□ -0.9
XRCC3-210ENST00000554974 A0A096LNI7 61 aa9.41□□□□□ -0.9
XRCC3-210ENST00000554974 GVQW2A0A096LPI5 108 aaPredicted RBP9.41□□□□□ -0.9
XRCC3-210ENST00000554974 ATP6V1G1O75348 118 aa9.41□□□□□ -0.9
XRCC3-210ENST00000554974 PAPPA-AS1Q5QFB9 102 aa9.41□□□□□ -0.9
XRCC3-210ENST00000554974 Q6ZN92 141 aa9.4□□□□□ -0.9
XRCC3-210ENST00000554974 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
XRCC3-210ENST00000554974 FAM19A3Q7Z5A8 133 aa9.4□□□□□ -0.9
XRCC3-210ENST00000554974 CHCHD1Q96BP2 118 aaKnown RBP9.4□□□□□ -0.9
XRCC3-210ENST00000554974 SCGB3A1Q96QR1 104 aa9.4□□□□□ -0.9
XRCC3-210ENST00000554974 IGHV3OR16-9A0A0B4J2B5 98 aa9.39□□□□□ -0.91
XRCC3-210ENST00000554974 HBDP02042 147 aa9.39□□□□□ -0.91
XRCC3-210ENST00000554974 UBE2D1P51668 147 aa9.39□□□□□ -0.91
XRCC3-210ENST00000554974 LINC00242Q5T6M2 205 aa9.39□□□□□ -0.91
XRCC3-210ENST00000554974 C2orf88Q9BSF0 95 aa9.39□□□□□ -0.91
XRCC3-210ENST00000554974 VCX2Q9H322 139 aa9.39□□□□□ -0.91
XRCC3-210ENST00000554974 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
XRCC3-210ENST00000554974 IGHV1-58A0A0C4DH39 117 aa9.38□□□□□ -0.91
XRCC3-210ENST00000554974 A0A0J9YXV3 536 aa9.38□□□□□ -0.91
XRCC3-210ENST00000554974 PDZD11Q5EBL8 140 aa9.38□□□□□ -0.91
XRCC3-210ENST00000554974 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
XRCC3-210ENST00000554974 LINC00526Q96FQ7 95 aa9.38□□□□□ -0.91
XRCC3-210ENST00000554974 COX7A2LO14548 114 aa9.37□□□□□ -0.91
XRCC3-210ENST00000554974 LINC00310P59036 64 aa9.36□□□□□ -0.91
XRCC3-210ENST00000554974 PMCHL1Q16048 86 aa9.36□□□□□ -0.91
XRCC3-210ENST00000554974 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.35□□□□□ -0.91
XRCC3-210ENST00000554974 C5orf38Q86SI9 138 aa9.35□□□□□ -0.91
XRCC3-210ENST00000554974 BAGE3Q86Y29 109 aa9.35□□□□□ -0.91
XRCC3-210ENST00000554974 A0A087WZ39 114 aa9.34□□□□□ -0.91
XRCC3-210ENST00000554974 MALP21145 153 aa9.34□□□□□ -0.91
XRCC3-210ENST00000554974 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
XRCC3-210ENST00000554974 REG3GQ6UW15 175 aa9.34□□□□□ -0.91
XRCC3-210ENST00000554974 SPINK6Q6UWN8 80 aa9.34□□□□□ -0.91
XRCC3-210ENST00000554974 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
XRCC3-210ENST00000554974 ZNF561-AS1K7EIQ3 104 aa9.33□□□□□ -0.92
XRCC3-210ENST00000554974 SERF1AO75920 110 aa9.33□□□□□ -0.92
XRCC3-210ENST00000554974 ATP5LO75964 103 aa9.33□□□□□ -0.92
XRCC3-210ENST00000554974 SEC11AP67812 179 aa9.33□□□□□ -0.92
XRCC3-210ENST00000554974 PMVKQ15126 192 aa9.33□□□□□ -0.92
XRCC3-210ENST00000554974 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
XRCC3-210ENST00000554974 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
XRCC3-210ENST00000554974 LINC00474Q9P2X8 69 aa9.33□□□□□ -0.92
XRCC3-210ENST00000554974 HIST1H2BKO60814 126 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms