RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TRBV7-3	A0A075B6L6	115 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	TRBV10-1	A0A0K0K1A3	114 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	TMEM262	E9PQX1	116 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	LTA	P01374	205 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	HLA-DQA1	P01909	254 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	S100A6	P06703	90 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	RBX1	P62877	108 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	SERF2	P84101	59 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	C9orf163	Q8N9P6	203 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	OR10AG1	Q8NH19	301 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	RMI2	Q96E14	147 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	CHCHD7	Q9BUK0	85 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	CYTL1	Q9NRR1	136 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	PHLDA3	Q9Y5J5	127 aa		3.09	□□□□□ -1.91
PSMC6-208	ENST00000554956	PKHD1L1	Q86WI1	4243 aa		3.09	□□□□□ -1.92
PSMC6-208	ENST00000554956	IGLV10-54	A0A075B6I4	117 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	CTXND1	A0A1B0GTU2	59 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	NDUFC2-KCTD14	E9PQ53	114 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	ANG	P03950	147 aa	Known RBP	3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	TPT1	P13693	172 aa	Known RBP	3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	RAB4B	P61018	213 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	CD164	Q04900	197 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956		Q0VG73	95 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	C6orf99	Q4VX62	202 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	FAM162B	Q5T6X4	162 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	LINC00269	Q8N2A0	174 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	HIST1H2BA	Q96A08	127 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	ZNF471	Q9BX82	626 aa	Predicted RBP	3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	ZFP30	Q9Y2G7	519 aa		3.08	□□□□□ -1.92
PSMC6-208	ENST00000554956	IGLV4-60	A0A075B6I1	120 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	FXYD6-FXYD2	A0A087WZ82	144 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	TRBV6-1	A0A0K0K1D8	114 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	MAP1LC3B2	A6NCE7	125 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	PSPHP1	O15172	72 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	RPS10	P46783	165 aa	Known RBP	3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	RAB5C	P51148	216 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	CIRBP	Q14011	172 aa	Known RBP	3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	ELOB	Q15370	118 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	ZNF56	Q15929	161 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	PCP2	Q8IVA1	136 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	ZFP82	Q8N141	532 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	MAP1LC3B	Q9GZQ8	125 aa		3.07	□□□□□ -1.92
PSMC6-208	ENST00000554956	IGLV1-50	A0A075B6I6	118 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956		A0A1B0GV50	99 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956		M0QY20	66 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	TCAP	O15273	167 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	NDUFS5	O43920	106 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	CRP	P02741	224 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	SEC11B	P0C7V7	166 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	GZMB	P10144	247 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	DEFA1	P59665	94 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	UBE2G1	P62253	170 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	MIA	Q16674	131 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	RNF213	Q63HN8	5207 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956		Q8N9L7	120 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	FMC1	Q96HJ9	113 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	CAMK2N2	Q96S95	79 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	DERL1	Q9BUN8	251 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	MED28	Q9H204	178 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	RPP21	Q9H633	154 aa	Known RBP	3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	TNXB	P22105	4242 aa		3.06	□□□□□ -1.92
PSMC6-208	ENST00000554956	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956		A0A1B0GVX0	72 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	TLX1NB	P0CAT3	122 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	AKR1C3	P42330	323 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	PSMB2	P49721	201 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	CNBP	P62633	177 aa	Known RBP	3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	CCL20	P78556	96 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	IQCJ	Q1A5X6	159 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	AKR1C8P	Q5T2L2	129 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956		Q6ZRU5	148 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	BAGE2	Q86Y30	109 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	SPACA4	Q8TDM5	124 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	NKX6-2	Q9C056	277 aa	Predicted RBP	3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	LRP2	P98164	4655 aa		3.05	□□□□□ -1.92
PSMC6-208	ENST00000554956	TRBV25-1	A0A075B6N4	114 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	ARPC5	O15511	151 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	CXCL1	P09341	107 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	IGLC6	P0CF74	106 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	NKX2-5	P52952	324 aa	Predicted RBP	3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	PMVK	Q15126	192 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	SPANXN1	Q5VSR9	72 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	C15orf56	Q8N910	161 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	SFT2D1	Q8WV19	159 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	MBD3L1	Q8WWY6	194 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	PLAC8	Q9NZF1	115 aa		3.04	□□□□□ -1.92
PSMC6-208	ENST00000554956	IGHV1-24	A0A0C4DH33	117 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956		A0A0D9SG52	128 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	MGP	P08493	103 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	RPL35	P42766	123 aa	Known RBP	3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	FOXA3	P55318	350 aa	Predicted RBP	3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	COX6A2	Q02221	97 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	STOML3	Q8TAV4	291 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	FAM213B	Q8TBF2	198 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	LINC00526	Q96FQ7	95 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	DPH3	Q96FX2	82 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	MRAP2	Q96G30	205 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	LINC01600	Q96MT4	127 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	TCEAL7	Q9BRU2	100 aa		3.03	□□□□□ -1.92
PSMC6-208	ENST00000554956	PRO0628	Q9UI54	55 aa		3.03	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms