RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 DAZ2Q13117 558 aaKnown RBP11.8□□□□□ -0.52
XRCC3-209ENST00000554913 DAZ4Q86SG3 579 aaKnown RBP11.8□□□□□ -0.52
XRCC3-209ENST00000554913 C11orf44Q8N8P7 122 aa11.8□□□□□ -0.52
XRCC3-209ENST00000554913 DAZ3Q9NR90 486 aaKnown RBP11.8□□□□□ -0.52
XRCC3-209ENST00000554913 ITPR2Q14571 2701 aa11.79□□□□□ -0.52
XRCC3-209ENST00000554913 JMJD1CQ15652 2540 aa11.79□□□□□ -0.52
XRCC3-209ENST00000554913 TRBV10-1A0A0K0K1A3 114 aa11.79□□□□□ -0.52
XRCC3-209ENST00000554913 FAM218AQ96MZ4 157 aa11.79□□□□□ -0.52
XRCC3-209ENST00000554913 ITPR3Q14573 2671 aa11.79□□□□□ -0.52
XRCC3-209ENST00000554913 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
XRCC3-209ENST00000554913 CHCHD5Q9BSY4 110 aa11.78□□□□□ -0.52
XRCC3-209ENST00000554913 NOP10Q9NPE3 64 aaKnown RBP11.78□□□□□ -0.52
XRCC3-209ENST00000554913 A0A1W2PRX2 142 aa11.77□□□□□ -0.53
XRCC3-209ENST00000554913 TRBV7-7A0A0K0K1E9 115 aa11.77□□□□□ -0.53
XRCC3-209ENST00000554913 BAALC-AS2P0C853 105 aa11.77□□□□□ -0.53
XRCC3-209ENST00000554913 AKAP9Q99996 3911 aa11.76□□□□□ -0.53
XRCC3-209ENST00000554913 NF1P21359 2839 aa11.76□□□□□ -0.53
XRCC3-209ENST00000554913 SETD2Q9BYW2 2564 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-209ENST00000554913 HERV-K104P63124 156 aa11.76□□□□□ -0.53
XRCC3-209ENST00000554913 SMCR5Q8TEV8 140 aa11.76□□□□□ -0.53
XRCC3-209ENST00000554913 C22orf24Q9Y442 160 aa11.76□□□□□ -0.53
XRCC3-209ENST00000554913 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
XRCC3-209ENST00000554913 TRACP01848 142 aa11.76□□□□□ -0.53
XRCC3-209ENST00000554913 NIPBLQ6KC79 2804 aaeCLIP11.75□□□□□ -0.53
XRCC3-209ENST00000554913 UBE2L6O14933 153 aa11.75□□□□□ -0.53
XRCC3-209ENST00000554913 HIST2H2BCQ6DN03 193 aa11.75□□□□□ -0.53
XRCC3-209ENST00000554913 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
XRCC3-209ENST00000554913 ACYP1P07311 99 aa11.74□□□□□ -0.53
XRCC3-209ENST00000554913 Q9HAA7 133 aa11.74□□□□□ -0.53
XRCC3-209ENST00000554913 FLNAP21333 2647 aaKnown RBP11.73□□□□□ -0.53
XRCC3-209ENST00000554913 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
XRCC3-209ENST00000554913 TRAV25A0A0B4J276 109 aa11.73□□□□□ -0.53
XRCC3-209ENST00000554913 MIR7-3HGQ8N6C7 128 aa11.73□□□□□ -0.53
XRCC3-209ENST00000554913 TOMM7Q9P0U1 55 aa11.73□□□□□ -0.53
XRCC3-209ENST00000554913 PDZD2O15018 2839 aa11.72□□□□□ -0.53
XRCC3-209ENST00000554913 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
XRCC3-209ENST00000554913 ACANP16112 2415 aa11.72□□□□□ -0.53
XRCC3-209ENST00000554913 SETXQ7Z333 2677 aaKnown RBP11.71□□□□□ -0.53
XRCC3-209ENST00000554913 GIG44P09565 113 aaPredicted RBP11.71□□□□□ -0.53
XRCC3-209ENST00000554913 IGKV2-28A0A075B6P5 120 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 FAM236AA0A1B0GUQ0 79 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 FAM236BA0A1B0GV22 79 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 IGKV2D-28P01615 120 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 WFDC10AQ9H1F0 79 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 TRGV2A0A075B6R0 118 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 PLAC8L1A1L4L8 177 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 CCL24O00175 119 aa11.7□□□□□ -0.54
XRCC3-209ENST00000554913 CRPP02741 224 aa11.69□□□□□ -0.54
XRCC3-209ENST00000554913 TRAV13-2A0A0B4J235 113 aa11.69□□□□□ -0.54
XRCC3-209ENST00000554913 RPL28P46779 137 aaKnown RBP11.69□□□□□ -0.54
XRCC3-209ENST00000554913 SND1-IT1Q9HBX3 110 aa11.69□□□□□ -0.54
XRCC3-209ENST00000554913 IGLV4-60A0A075B6I1 120 aa11.68□□□□□ -0.54
XRCC3-209ENST00000554913 LINC00643Q86TS7 51 aa11.68□□□□□ -0.54
XRCC3-209ENST00000554913 C3orf56Q8N813 242 aa11.68□□□□□ -0.54
XRCC3-209ENST00000554913 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
XRCC3-209ENST00000554913 DEFB113Q30KQ7 82 aa11.67□□□□□ -0.54
XRCC3-209ENST00000554913 KRTAP1-3Q8IUG1 177 aa11.67□□□□□ -0.54
XRCC3-209ENST00000554913 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
XRCC3-209ENST00000554913 LINC00158P58513 81 aa11.67□□□□□ -0.54
XRCC3-209ENST00000554913 FAM222AQ5U5X8 452 aa11.67□□□□□ -0.54
XRCC3-209ENST00000554913 IMUPQ9GZP8 106 aa11.67□□□□□ -0.54
XRCC3-209ENST00000554913 GCN1Q92616 2671 aaKnown RBP11.67□□□□□ -0.54
XRCC3-209ENST00000554913 PF4P02776 101 aa11.66□□□□□ -0.54
XRCC3-209ENST00000554913 MALP21145 153 aa11.66□□□□□ -0.54
XRCC3-209ENST00000554913 SDIM1Q6ZPB5 146 aa11.66□□□□□ -0.54
XRCC3-209ENST00000554913 SMIM11BQ8TCY0 68 aa11.66□□□□□ -0.54
XRCC3-209ENST00000554913 A0A087WYN8 130 aa11.65□□□□□ -0.54
XRCC3-209ENST00000554913 GAGE2AQ6NT46 116 aa11.65□□□□□ -0.54
XRCC3-209ENST00000554913 TRGV4A0A0C4DH28 118 aa11.65□□□□□ -0.54
XRCC3-209ENST00000554913 CCL18P55774 89 aa11.65□□□□□ -0.54
XRCC3-209ENST00000554913 UNC79Q9P2D8 2635 aa11.65□□□□□ -0.54
XRCC3-209ENST00000554913 TRBV6-4A0A1B0GX49 114 aa11.64□□□□□ -0.55
XRCC3-209ENST00000554913 DNAJC9-AS1A6NH13 148 aa11.64□□□□□ -0.55
XRCC3-209ENST00000554913 C16orf74Q96GX8 76 aa11.64□□□□□ -0.55
XRCC3-209ENST00000554913 IGHV3OR16-9A0A0B4J2B5 98 aa11.64□□□□□ -0.55
XRCC3-209ENST00000554913 C9orf129Q5T035 196 aaKnown RBP11.64□□□□□ -0.55
XRCC3-209ENST00000554913 C5orf38Q86SI9 138 aa11.63□□□□□ -0.55
XRCC3-209ENST00000554913 INAFM2P0DMQ5 153 aa11.63□□□□□ -0.55
XRCC3-209ENST00000554913 PFN2P35080 140 aa11.63□□□□□ -0.55
XRCC3-209ENST00000554913 SMIM20Q8N5G0 67 aa11.63□□□□□ -0.55
XRCC3-209ENST00000554913 MTORP42345 2549 aa11.62□□□□□ -0.55
XRCC3-209ENST00000554913 TRBV6-8A0A0A6YYG3 113 aa11.62□□□□□ -0.55
XRCC3-209ENST00000554913 ATP5G1P05496 136 aa11.62□□□□□ -0.55
XRCC3-209ENST00000554913 ESM1Q9NQ30 184 aa11.62□□□□□ -0.55
XRCC3-209ENST00000554913 ANK3Q12955 4377 aaKnown RBP11.62□□□□□ -0.55
XRCC3-209ENST00000554913 TMEM86BQ8N661 226 aa11.61□□□□□ -0.55
XRCC3-209ENST00000554913 DNAL4O96015 105 aa11.61□□□□□ -0.55
XRCC3-209ENST00000554913 FHL2Q14192 279 aa11.61□□□□□ -0.55
XRCC3-209ENST00000554913 HECTD1Q9ULT8 2610 aa11.61□□□□□ -0.55
XRCC3-209ENST00000554913 CSNK1G2-AS1Q8NCQ2 148 aa11.6□□□□□ -0.55
XRCC3-209ENST00000554913 OVOL2Q9BRP0 275 aa11.6□□□□□ -0.55
XRCC3-209ENST00000554913 FN1P02751 2386 aaKnown RBP11.59□□□□□ -0.55
XRCC3-209ENST00000554913 A0A087WZ39 114 aa11.59□□□□□ -0.55
XRCC3-209ENST00000554913 WFDC11Q8NEX6 87 aa11.59□□□□□ -0.55
XRCC3-209ENST00000554913 C11orf68Q9H3H3 251 aaKnown RBP11.59□□□□□ -0.55
XRCC3-209ENST00000554913 C19orf73Q9NVV2 129 aa11.59□□□□□ -0.55
XRCC3-209ENST00000554913 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
XRCC3-209ENST00000554913 FASNP49327 2511 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms