RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
PPP4R3A-201ENST00000554308 UBE2WQ96B02 151 aa10.48□□□□□ -0.73
PPP4R3A-201ENST00000554308 MAST4O15021 2626 aa10.48□□□□□ -0.73
PPP4R3A-201ENST00000554308 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
PPP4R3A-201ENST00000554308 CCDC179H3BU77 68 aa10.47□□□□□ -0.73
PPP4R3A-201ENST00000554308 RPL13AP40429 203 aaKnown RBP10.47□□□□□ -0.73
PPP4R3A-201ENST00000554308 MIAQ16674 131 aa10.47□□□□□ -0.73
PPP4R3A-201ENST00000554308 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
PPP4R3A-201ENST00000554308 PYGO1Q9Y3Y4 419 aa10.47□□□□□ -0.73
PPP4R3A-201ENST00000554308 GAGE5Q13069 117 aa10.46□□□□□ -0.73
PPP4R3A-201ENST00000554308 GAGE6Q13070 117 aa10.46□□□□□ -0.73
PPP4R3A-201ENST00000554308 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.73
PPP4R3A-201ENST00000554308 PIK3CD-AS1Q5SR53 167 aa10.45□□□□□ -0.74
PPP4R3A-201ENST00000554308 CSNK1G2-AS1Q8NCQ2 148 aa10.45□□□□□ -0.74
PPP4R3A-201ENST00000554308 SPANXDQ9BXN6 97 aa10.45□□□□□ -0.74
PPP4R3A-201ENST00000554308 SPANXCQ9NY87 97 aa10.45□□□□□ -0.74
PPP4R3A-201ENST00000554308 UBE2D4Q9Y2X8 147 aa10.45□□□□□ -0.74
PPP4R3A-201ENST00000554308 C9orf66Q5T8R8 295 aa10.44□□□□□ -0.74
PPP4R3A-201ENST00000554308 SVIPQ8NHG7 77 aa10.44□□□□□ -0.74
PPP4R3A-201ENST00000554308 RS1O15537 224 aa10.44□□□□□ -0.74
PPP4R3A-201ENST00000554308 A0A0U1RRA0 63 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 GAGE7O76087 117 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 GAGE12FP0CL80 117 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 GAGE12GP0CL81 117 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 GAGE12IP0CL82 117 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 LINC01600Q96MT4 127 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 CDKN2A-AS1Q9UH64 79 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 TINCRA0A1B0GVN0 87 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 IFITM1P13164 125 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 IL17DQ8TAD2 202 aa10.43□□□□□ -0.74
PPP4R3A-201ENST00000554308 TRGV2A0A075B6R0 118 aa10.42□□□□□ -0.74
PPP4R3A-201ENST00000554308 PLAC8L1A1L4L8 177 aa10.42□□□□□ -0.74
PPP4R3A-201ENST00000554308 C16orf74Q96GX8 76 aa10.42□□□□□ -0.74
PPP4R3A-201ENST00000554308 ZNF625Q96I27 306 aaPredicted RBP10.42□□□□□ -0.74
PPP4R3A-201ENST00000554308 COL6A5A8TX70 2615 aa10.41□□□□□ -0.74
PPP4R3A-201ENST00000554308 LST1O00453 97 aa10.41□□□□□ -0.74
PPP4R3A-201ENST00000554308 COX6A2Q02221 97 aa10.41□□□□□ -0.74
PPP4R3A-201ENST00000554308 EDA2RQ9HAV5 297 aa10.41□□□□□ -0.74
PPP4R3A-201ENST00000554308 COX6CP09669 75 aa10.4□□□□□ -0.74
PPP4R3A-201ENST00000554308 DAZ2Q13117 558 aaKnown RBP10.4□□□□□ -0.75
PPP4R3A-201ENST00000554308 TMEM101Q96IK0 257 aa10.4□□□□□ -0.75
PPP4R3A-201ENST00000554308 GAGE12JA6NER3 117 aa10.39□□□□□ -0.75
PPP4R3A-201ENST00000554308 GAGE4Q13068 117 aa10.39□□□□□ -0.75
PPP4R3A-201ENST00000554308 H3BT86 120 aa10.39□□□□□ -0.75
PPP4R3A-201ENST00000554308 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
PPP4R3A-201ENST00000554308 CYSRT1A8MQ03 144 aa10.38□□□□□ -0.75
PPP4R3A-201ENST00000554308 DEFB130BP0DP73 79 aa10.37□□□□□ -0.75
PPP4R3A-201ENST00000554308 DEFB130AP0DP74 79 aa10.37□□□□□ -0.75
PPP4R3A-201ENST00000554308 Q6Q795 121 aa10.37□□□□□ -0.75
PPP4R3A-201ENST00000554308 KRTAP24-1Q3LI83 254 aa10.36□□□□□ -0.75
PPP4R3A-201ENST00000554308 Q9H8V8 135 aa10.36□□□□□ -0.75
PPP4R3A-201ENST00000554308 K7EQD1 137 aa10.36□□□□□ -0.75
PPP4R3A-201ENST00000554308 SOSTDC1Q6X4U4 206 aa10.36□□□□□ -0.75
PPP4R3A-201ENST00000554308 DNAJC30Q96LL9 226 aa10.36□□□□□ -0.75
PPP4R3A-201ENST00000554308 NDUFA1O15239 70 aa10.35□□□□□ -0.75
PPP4R3A-201ENST00000554308 DEFB135Q30KP9 77 aa10.35□□□□□ -0.75
PPP4R3A-201ENST00000554308 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
PPP4R3A-201ENST00000554308 ANK2Q01484 3957 aa10.35□□□□□ -0.75
PPP4R3A-201ENST00000554308 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
PPP4R3A-201ENST00000554308 RPL36AP83881 106 aaKnown RBP10.35□□□□□ -0.75
PPP4R3A-201ENST00000554308 RPL36ALQ969Q0 106 aaKnown RBP10.35□□□□□ -0.75
PPP4R3A-201ENST00000554308 CHCHD5Q9BSY4 110 aa10.35□□□□□ -0.75
PPP4R3A-201ENST00000554308 TRGV4A0A0C4DH28 118 aa10.34□□□□□ -0.75
PPP4R3A-201ENST00000554308 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
PPP4R3A-201ENST00000554308 DEFB4AO15263 64 aa10.34□□□□□ -0.75
PPP4R3A-201ENST00000554308 C3orf56Q8N813 242 aa10.34□□□□□ -0.75
PPP4R3A-201ENST00000554308 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
PPP4R3A-201ENST00000554308 TIMM17BO60830 172 aa10.34□□□□□ -0.75
PPP4R3A-201ENST00000554308 DEFB121Q5J5C9 76 aa10.34□□□□□ -0.75
PPP4R3A-201ENST00000554308 WFDC9Q8NEX5 89 aa10.34□□□□□ -0.75
PPP4R3A-201ENST00000554308 OXLD1Q5BKU9 147 aa10.33□□□□□ -0.76
PPP4R3A-201ENST00000554308 DGAT2L7PQ6IED9 249 aa10.33□□□□□ -0.76
PPP4R3A-201ENST00000554308 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
PPP4R3A-201ENST00000554308 LINC00242Q5T6M2 205 aa10.33□□□□□ -0.76
PPP4R3A-201ENST00000554308 NOTCH1P46531 2555 aa10.33□□□□□ -0.76
PPP4R3A-201ENST00000554308 X6R8D5 127 aa10.32□□□□□ -0.76
PPP4R3A-201ENST00000554308 TRAV13-1A0A0B4J241 112 aa10.31□□□□□ -0.76
PPP4R3A-201ENST00000554308 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
PPP4R3A-201ENST00000554308 TIRAPP58753 221 aa10.31□□□□□ -0.76
PPP4R3A-201ENST00000554308 SMCR5Q8TEV8 140 aa10.31□□□□□ -0.76
PPP4R3A-201ENST00000554308 IGLV5-39A0A0G2JS06 123 aa10.3□□□□□ -0.76
PPP4R3A-201ENST00000554308 FAM240AA0A1B0GVK7 77 aa10.3□□□□□ -0.76
PPP4R3A-201ENST00000554308 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
PPP4R3A-201ENST00000554308 CIRBPQ14011 172 aaKnown RBP10.3□□□□□ -0.76
PPP4R3A-201ENST00000554308 SMIM1B2RUZ4 78 aa10.29□□□□□ -0.76
PPP4R3A-201ENST00000554308 COX7A2LO14548 114 aa10.29□□□□□ -0.76
PPP4R3A-201ENST00000554308 FHL2Q14192 279 aa10.29□□□□□ -0.76
PPP4R3A-201ENST00000554308 MEIG1Q5JSS6 88 aa10.29□□□□□ -0.76
PPP4R3A-201ENST00000554308 IGHV4-30-4P0DP06 118 aa10.29□□□□□ -0.76
PPP4R3A-201ENST00000554308 DAZ4Q86SG3 579 aaKnown RBP10.29□□□□□ -0.76
PPP4R3A-201ENST00000554308 FAM218AQ96MZ4 157 aa10.29□□□□□ -0.76
PPP4R3A-201ENST00000554308 DAZ3Q9NR90 486 aaKnown RBP10.29□□□□□ -0.76
PPP4R3A-201ENST00000554308 APOC4P55056 127 aa10.28□□□□□ -0.76
PPP4R3A-201ENST00000554308 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
PPP4R3A-201ENST00000554308 TRBV6-4A0A1B0GX49 114 aa10.28□□□□□ -0.76
PPP4R3A-201ENST00000554308 FAM222AQ5U5X8 452 aa10.28□□□□□ -0.76
PPP4R3A-201ENST00000554308 PRIMA1Q86XR5 153 aa10.28□□□□□ -0.76
PPP4R3A-201ENST00000554308 SMIM20Q8N5G0 67 aa10.28□□□□□ -0.76
PPP4R3A-201ENST00000554308 TRBV7-7A0A0K0K1E9 115 aa10.27□□□□□ -0.77
PPP4R3A-201ENST00000554308 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms