RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 NCS1P62166 190 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 WT1-ASQ06250 92 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 ZNF846Q147U1 533 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 DEFB114Q30KQ6 69 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 PCOTHQ58A44 107 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 C10orf55Q5SWW7 151 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 EIF5AL1Q6IS14 154 aaKnown RBP1.98□□□□□ -2.09
PABPN1-204ENST00000554062 KRTAP13-1Q8IUC0 172 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 SBSPONQ8IVN8 264 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 FAM24BQ8N5W8 94 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 MAFIPQ8WZ33 124 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 FXYD6Q9H0Q3 95 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 CYSTM1Q9H1C7 97 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 Q9H521 79 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 MED9Q9NWA0 146 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 SMPXQ9UHP9 88 aa1.98□□□□□ -2.09
PABPN1-204ENST00000554062 TNXBP22105 4242 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 TRAV14DV4A0A0A6YYC5 116 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 TRAV5A0A0B4J249 113 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 C2orf70A6NJV1 201 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 I3L2K1 104 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 M0R378 163 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 PITX3O75364 302 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 IFNA21P01568 189 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 ZNF705BP0CI00 300 aaPredicted RBP1.97□□□□□ -2.09
PABPN1-204ENST00000554062 RNASE4P34096 147 aaKnown RBP1.97□□□□□ -2.09
PABPN1-204ENST00000554062 ETV6P41212 452 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 RHOGP84095 191 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 SSBP1Q04837 148 aaKnown RBP1.97□□□□□ -2.09
PABPN1-204ENST00000554062 NEDD8Q15843 81 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 RTL8BQ17RB0 113 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 ESRGQ1W209 222 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 UNQ5815/PRO19632Q6UWF5 114 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 IDO2Q6ZQW0 420 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 FP248Q71RG6 208 aaPredicted RBP1.97□□□□□ -2.09
PABPN1-204ENST00000554062 VSTM2AQ8TAG5 236 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 C6orf62Q9GZU0 229 aaPredicted RBP1.97□□□□□ -2.09
PABPN1-204ENST00000554062 TMEM126AQ9H061 195 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 ATG5Q9H1Y0 275 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 SS18L2Q9UHA2 77 aa1.97□□□□□ -2.09
PABPN1-204ENST00000554062 TRBV6-5A0A0K0K1A5 114 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 MAP1LC3B2A6NCE7 125 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 GABARAPH6UMI1 98 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 GPR31O00270 319 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 PRH1P02810 166 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 HIST1H1BP16401 226 aaKnown RBP1.96□□□□□ -2.1
PABPN1-204ENST00000554062 CBLN1P23435 193 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 TMBIM6P55061 237 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 TPPP2P59282 170 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 GNG2P59768 71 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 PRCDQ00LT1 54 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 SPCS2Q15005 226 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 SURF2Q15527 256 aaPredicted RBP1.96□□□□□ -2.1
PABPN1-204ENST00000554062 VMA21Q3ZAQ7 101 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 NMSQ5H8A3 153 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 TMEM229BQ8NBD8 167 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 SMIM4Q8WVI0 70 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 BORCS5Q969J3 196 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 ISOC1Q96CN7 298 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 S100A16Q96FQ6 103 aaKnown RBP1.96□□□□□ -2.1
PABPN1-204ENST00000554062 SLC25A21Q9BQT8 299 aaPredicted RBP1.96□□□□□ -2.1
PABPN1-204ENST00000554062 MAP1LC3BQ9GZQ8 125 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 COA4Q9NYJ1 87 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 TAS2R8Q9NYW2 309 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 MRPL36Q9P0J6 103 aaKnown RBP1.96□□□□□ -2.1
PABPN1-204ENST00000554062 V9GYH0 126 aa1.96□□□□□ -2.1
PABPN1-204ENST00000554062 MUC4Q99102 2169 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 TRBV7-1A0A0A6YYK4 115 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 TRAV2A0A0B4J234 112 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 A8MTW9 85 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 MRPS10P82664 201 aaKnown RBP1.95□□□□□ -2.1
PABPN1-204ENST00000554062 DEFA5Q01523 94 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 EXOC3-AS1Q8N2X6 119 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 GRPEL2Q8TAA5 225 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 LSM10Q969L4 123 aaKnown RBP1.95□□□□□ -2.1
PABPN1-204ENST00000554062 TP53RKQ96S44 253 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 CCDC32Q9BV29 185 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 MRPL32Q9BYC8 188 aaKnown RBP1.95□□□□□ -2.1
PABPN1-204ENST00000554062 HMCN2Q8NDA2 5059 aa1.95□□□□□ -2.1
PABPN1-204ENST00000554062 LCE6AA0A183 80 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 CRYM-AS1A6NIL9 109 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 NDUFA4O00483 81 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 CD3DP04234 171 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 IFNA4P05014 189 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 IGLC1P0CG04 106 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 TRAPPC2P0DI81 140 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 TRAPPC2BP0DI82 140 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 APELAP0DMC3 54 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 MGST1P10620 155 aaKnown RBP1.94□□□□□ -2.1
PABPN1-204ENST00000554062 SLC25A6P12236 298 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 ARPC4P59998 168 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 CATR1Q13166 79 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 PLGLAQ15195 96 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 TMEM78Q5T7P6 136 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 Q6ZRN7 208 aaPredicted RBP1.94□□□□□ -2.1
PABPN1-204ENST00000554062 LINC00299Q6ZSB3 139 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 SFT2D1Q8WV19 159 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 OR4C12Q96R67 309 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 TSC22D3Q99576 134 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 NPCDR1Q9BY65 106 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms