RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 Q8N2B8 174 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 DPH3P1Q9H4G8 78 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 HIGD1BQ9P298 99 aa3.09□□□□□ -1.91
FOXN3-206ENST00000554005 MTORP42345 2549 aa3.09□□□□□ -1.92
FOXN3-206ENST00000554005 FN1P02751 2386 aaKnown RBP3.08□□□□□ -1.92
FOXN3-206ENST00000554005 IGHV3-74A0A0B4J1X5 117 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 A0A1B0GVX0 72 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 hADV29S1A0JD25 119 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 TCRAP04437 139 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 RNASE2P10153 161 aaKnown RBP3.08□□□□□ -1.92
FOXN3-206ENST00000554005 IAPPP10997 89 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 ZNF138P52744 262 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 BLCAPP62952 87 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 ERHP84090 104 aaKnown RBP3.08□□□□□ -1.92
FOXN3-206ENST00000554005 WT1-ASQ06250 92 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 KLK9Q2XQG4 91 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 FP248Q71RG6 208 aaPredicted RBP3.08□□□□□ -1.92
FOXN3-206ENST00000554005 LINC00305Q7Z4B0 112 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 PSENENQ9NZ42 101 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 KLK9Q9UKQ9 250 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 ARL2-SNX15V9GYD0 113 aa3.08□□□□□ -1.92
FOXN3-206ENST00000554005 MAP1AP78559 2803 aaPredicted RBP3.08□□□□□ -1.92
FOXN3-206ENST00000554005 TNCP24821 2201 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 C2CD3Q4AC94 2353 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 CUBNO60494 3623 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 ZFHX3Q15911 3703 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 TRAV2A0A0B4J234 112 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 TRAV41A0A0B4J266 112 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 IGHV1-58A0A0C4DH39 117 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 H3BP45 60 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 H3BUA1 57 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 MYCNOSP40205 109 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 NPC2P61916 151 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 HIST1H4AP62805 103 aaKnown RBP3.07□□□□□ -1.92
FOXN3-206ENST00000554005 SPINK9Q5DT21 86 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 SPANXN5Q5MJ07 72 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 SCGB1D4Q6XE38 83 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 RPP25LQ8N5L8 163 aaKnown RBP3.07□□□□□ -1.92
FOXN3-206ENST00000554005 DCANP1Q8TF63 244 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 COPS9Q8WXC6 57 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 SMIM7Q9BQ49 75 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 SLC25A2Q9BXI2 301 aa3.07□□□□□ -1.92
FOXN3-206ENST00000554005 TRAV8-2A0A0B4J237 113 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 TRAV8-4A0A0B4J246 113 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 FAM223BA6NKX1 122 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 G3V318 75 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 LGALS9O00182 355 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 ATOX1O00244 68 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 CST7O76096 145 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 DEFA4P12838 97 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 DAD1P61803 113 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 MRPS36P82909 103 aaKnown RBP3.06□□□□□ -1.92
FOXN3-206ENST00000554005 LINC01545Q5VT33 79 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 FAM223AQ8IWN6 122 aa3.06□□□□□ -1.92
FOXN3-206ENST00000554005 SETD2Q9BYW2 2564 aaPredicted RBP3.06□□□□□ -1.92
FOXN3-206ENST00000554005 SVEP1Q4LDE5 3571 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 NIPBLQ6KC79 2804 aaeCLIP3.05□□□□□ -1.92
FOXN3-206ENST00000554005 I3L2K1 104 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 K7EIM0 57 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 APELAP0DMC3 54 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 SCGB1C2P0DMR2 95 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 FXYD2P54710 66 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 PSMG4Q5JS54 123 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 LGALS9CQ6DKI2 356 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 CEMP1Q6PRD7 247 aaPredicted RBP3.05□□□□□ -1.92
FOXN3-206ENST00000554005 C5orf38Q86SI9 138 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 OR5C1Q8NGR4 320 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 USMG5Q96IX5 58 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 CYSTM1Q9H1C7 97 aa3.05□□□□□ -1.92
FOXN3-206ENST00000554005 PLXNB1O43157 2135 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 MXRA5Q9NR99 2828 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 IGKV2-28A0A075B6P5 120 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 TRAV8-1A0A0A6YYK1 113 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 TRBV7-1A0A0A6YYK4 115 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 IGHV1-24A0A0C4DH33 117 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 CLPSL1A2RUU4 121 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 NDUFS5O43920 106 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 IGKV2D-28P01615 120 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 TRGV3P03979 118 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 ORMDL2Q53FV1 153 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 LINC00483Q53H64 154 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 CENPWQ5EE01 88 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 DEFB121Q5J5C9 76 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 ATP5L2Q7Z4Y8 100 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 FAM19A2Q8N3H0 131 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 SERP2Q8N6R1 65 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 TRGV9Q99603 122 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 C11orf68Q9H3H3 251 aaKnown RBP3.04□□□□□ -1.92
FOXN3-206ENST00000554005 ZNF355PQ9NSJ1 428 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 LINC00527Q9UJ94 153 aa3.04□□□□□ -1.92
FOXN3-206ENST00000554005 IGLV4-60A0A075B6I1 120 aa3.03□□□□□ -1.92
FOXN3-206ENST00000554005 IGKV1OR2-108A0A075B7D4 117 aa3.03□□□□□ -1.92
FOXN3-206ENST00000554005 IGHV3OR16-9A0A0B4J2B5 98 aa3.03□□□□□ -1.92
FOXN3-206ENST00000554005 UBE2L5PA0A1B0GUS4 154 aa3.03□□□□□ -1.92
FOXN3-206ENST00000554005 M0R378 163 aa3.03□□□□□ -1.92
FOXN3-206ENST00000554005 IGKV1-17P01599 117 aa3.03□□□□□ -1.92
FOXN3-206ENST00000554005 UBE2D3P61077 147 aa3.03□□□□□ -1.92
FOXN3-206ENST00000554005 SNRPD3P62318 126 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms