RNA–Protein interactions for RNA: ENST00000553906.1

TRAV37-201, Transcript of T cell receptor alpha variable 37 (pseudogene), humanhuman

BASIC

Gene TRAV37, Length 342 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV37-201ENST00000553906 LCA10Q71F78 164 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 FAM223AQ8IWN6 122 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 KLF14Q8TD94 323 aaPredicted RBP2.42□□□□□ -2.02
TRAV37-201ENST00000553906 RNASE6Q93091 150 aaKnown RBP2.42□□□□□ -2.02
TRAV37-201ENST00000553906 UBE2E2Q96LR5 201 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 CYSTM1Q9H1C7 97 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 LINC00574Q9H8X3 128 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 MRPL36Q9P0J6 103 aaKnown RBP2.42□□□□□ -2.02
TRAV37-201ENST00000553906 DEC1Q9P2X7 70 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 SPRR3Q9UBC9 169 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 PHLDA3Q9Y5J5 127 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 MED12Q93074 2177 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 CELSR1Q9NYQ6 3014 aa2.42□□□□□ -2.02
TRAV37-201ENST00000553906 NACAE9PAV3 2078 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 SPENQ96T58 3664 aaKnown RBP2.41□□□□□ -2.02
TRAV37-201ENST00000553906 DNHD1Q96M86 4753 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 CELSR2Q9HCU4 2923 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 APCP25054 2843 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 IGKV1D-37A0A075B6S9 117 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 IGHV4-30-2A0A087WSY4 118 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 IGHV1-18A0A0C4DH31 117 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 IGHV3-20A0A0C4DH32 117 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 IGHV5-51A0A0C4DH38 117 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 LOC100131303A0A0U1RQF7 123 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 E7EQL1 145 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 FUSP35637 526 aaKnown RBP eCLIP2.41□□□□□ -2.02
TRAV37-201ENST00000553906 RPL28P46779 137 aaKnown RBP2.41□□□□□ -2.02
TRAV37-201ENST00000553906 CRIP1P50238 77 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 FXYD7P58549 80 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 NSUN5P1Q3KNT7 163 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 ASB16-AS1Q495Z4 193 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 KLHL30-AS1Q8NEE0 82 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 CXXC4Q9H2H0 198 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 CTSZQ9UBR2 303 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 PKD1L1Q8TDX9 2849 aa2.41□□□□□ -2.02
TRAV37-201ENST00000553906 COL6A5A8TX70 2615 aa2.4□□□□□ -2.02
TRAV37-201ENST00000553906 POLEQ07864 2286 aa2.4□□□□□ -2.02
TRAV37-201ENST00000553906 ZNF407Q9C0G0 2248 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 IGHV3-38A0A0C4DH36 116 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 IGKV3D-7A0A0C4DH55 119 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 TRBV6-5A0A0K0K1A5 114 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 TMEM256-PLSCR3K7ERE1 68 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 M0R1W7 72 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 M0R378 163 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 EFNA2O43921 213 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 LYZP61626 148 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 ZNF833PQ6ZTB9 187 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 C7orf65Q6ZTY9 151 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 CLEC2BQ92478 149 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 LIMD2Q9BT23 127 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 DCTN5Q9BTE1 182 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 SMAD5-AS1Q9Y6J3 95 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 TLN2Q9Y4G6 2542 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 RAI1Q7Z5J4 1906 aaPredicted RBP2.4□□□□□ -2.03
TRAV37-201ENST00000553906 INTS1Q8N201 2190 aaKnown RBP2.4□□□□□ -2.03
TRAV37-201ENST00000553906 CRYBG3Q68DQ2 2970 aa2.4□□□□□ -2.03
TRAV37-201ENST00000553906 PRRC2AP48634 2157 aaKnown RBP2.39□□□□□ -2.03
TRAV37-201ENST00000553906 IGLV4-3A0A075B6K6 122 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 IGHV5-10-1A0A0J9YXX1 117 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 KRTAP16-1A8MUX0 517 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 NDUFA1O15239 70 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 ZNF73O43830 326 aaPredicted RBP2.39□□□□□ -2.03
TRAV37-201ENST00000553906 MRPL33O75394 65 aaKnown RBP2.39□□□□□ -2.03
TRAV37-201ENST00000553906 NDUFB1O75438 58 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 TRBV12-3P01733 135 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 SAA1P0DJI8 122 aaPredicted RBP2.39□□□□□ -2.03
TRAV37-201ENST00000553906 IGHV3-30-3P0DP02 117 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 S100A4P26447 101 aaKnown RBP2.39□□□□□ -2.03
TRAV37-201ENST00000553906 TSPEAR-AS2P59090 65 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 NKAPP1Q8N9T2 125 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 MAPK1IP1LQ8NDC0 245 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 LINC01560Q8TB33 94 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 TMEM254Q8TBM7 123 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 DIRC1Q969H9 104 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 RNF5Q99942 180 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 FGF23Q9GZV9 251 aaPredicted RBP2.39□□□□□ -2.03
TRAV37-201ENST00000553906 PROK2Q9HC23 129 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 LINC00846Q9NV44 126 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 ORMDL1Q9P0S3 153 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 LINC00588Q9Y4M8 146 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 CSMD1Q96PZ7 3565 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 LAMA1P25391 3075 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 RP1P56715 2156 aa2.39□□□□□ -2.03
TRAV37-201ENST00000553906 DIDO1Q9BTC0 2240 aaKnown RBP2.38□□□□□ -2.03
TRAV37-201ENST00000553906 ACANP16112 2415 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 IGLV3-12A0A075B6K2 115 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 TRAV23DV6A0A075B6W5 121 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 TRBV7-4A0A0J9YYF1 115 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 C19orf84I3L1E1 186 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 CRPP02741 224 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 SAA2P0DJI9 122 aaPredicted RBP2.38□□□□□ -2.03
TRAV37-201ENST00000553906 CCL4P13236 92 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 RNASE4P34096 147 aaKnown RBP2.38□□□□□ -2.03
TRAV37-201ENST00000553906 RPL27AP46776 148 aaKnown RBP2.38□□□□□ -2.03
TRAV37-201ENST00000553906 POLR2KP53803 58 aaKnown RBP2.38□□□□□ -2.03
TRAV37-201ENST00000553906 SS18Q15532 418 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 C15orf32Q32M92 178 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 RPL39P5Q59GN2 51 aa2.38□□□□□ -2.03
TRAV37-201ENST00000553906 C6orf223Q8N319 242 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms