RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 INAFM2P0DMQ5 153 aa9.84□□□□□ -0.83
SHMT2-208ENST00000553868 RNASE13Q5GAN3 156 aaKnown RBP9.84□□□□□ -0.83
SHMT2-208ENST00000553868 ZC2HC1BQ5TFG8 222 aa9.84□□□□□ -0.83
SHMT2-208ENST00000553868 ATOH7Q8N100 152 aa9.84□□□□□ -0.83
SHMT2-208ENST00000553868 CCL25O15444 150 aa9.83□□□□□ -0.84
SHMT2-208ENST00000553868 ANGP03950 147 aaKnown RBP9.83□□□□□ -0.84
SHMT2-208ENST00000553868 IGLC3P0DOY3 106 aa9.83□□□□□ -0.84
SHMT2-208ENST00000553868 UBE2D1P51668 147 aa9.83□□□□□ -0.84
SHMT2-208ENST00000553868 NFE4Q86UQ8 179 aa9.83□□□□□ -0.84
SHMT2-208ENST00000553868 GEMIN7Q9H840 131 aaKnown RBP9.83□□□□□ -0.84
SHMT2-208ENST00000553868 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-208ENST00000553868 IGLV4-69A0A075B6H9 119 aa9.82□□□□□ -0.84
SHMT2-208ENST00000553868 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
SHMT2-208ENST00000553868 WFDC10BQ8IUB3 73 aa9.82□□□□□ -0.84
SHMT2-208ENST00000553868 CHAC1Q9BUX1 264 aa9.82□□□□□ -0.84
SHMT2-208ENST00000553868 TRAV13-1A0A0B4J241 112 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 A0A0J9YXV3 536 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 HERVK_113P61574 105 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 HERVK_113P63121 156 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 SS18Q15532 418 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 LINC01556Q5JQF7 62 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 FAM19A3Q7Z5A8 133 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 UPK3BQ9BT76 320 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 LINC00588Q9Y4M8 146 aa9.81□□□□□ -0.84
SHMT2-208ENST00000553868 C11orf86A6NJI1 115 aa9.8□□□□□ -0.84
SHMT2-208ENST00000553868 TMEM170BQ5T4T1 132 aa9.8□□□□□ -0.84
SHMT2-208ENST00000553868 CDPF1Q6NVV7 123 aa9.8□□□□□ -0.84
SHMT2-208ENST00000553868 UBE2DNLQ8IWF7 75 aa9.8□□□□□ -0.84
SHMT2-208ENST00000553868 PAM16Q9Y3D7 125 aa9.8□□□□□ -0.84
SHMT2-208ENST00000553868 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 hDV102S1A0JD36 115 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 H3BRM9 83 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 SIVA1O15304 175 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 IGHV3-30P01768 117 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 IGHV3-33P01772 117 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 CRPP02741 224 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 IGHV3-30-5P0DP03 117 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 TNP2Q05952 138 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 REG3AQ06141 175 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 SPATA45Q537H7 98 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 LINC00269Q8N2A0 174 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 HMCN2Q8NDA2 5059 aa9.79□□□□□ -0.84
SHMT2-208ENST00000553868 LINC00959A0A1B0GUT2 108 aa9.78□□□□□ -0.84
SHMT2-208ENST00000553868 EPM2AB3EWF7 344 aa9.78□□□□□ -0.84
SHMT2-208ENST00000553868 LINC00242Q5T6M2 205 aa9.78□□□□□ -0.84
SHMT2-208ENST00000553868 Q6ZR54 194 aa9.78□□□□□ -0.84
SHMT2-208ENST00000553868 LINC00469Q8N7U9 141 aa9.78□□□□□ -0.84
SHMT2-208ENST00000553868 KLK12Q9UKR0 248 aa9.78□□□□□ -0.84
SHMT2-208ENST00000553868 K7EP13 123 aa9.77□□□□□ -0.85
SHMT2-208ENST00000553868 ZNF22P17026 224 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-208ENST00000553868 STPG4Q8N801 248 aa9.77□□□□□ -0.85
SHMT2-208ENST00000553868 PRR34Q9NV39 138 aa9.77□□□□□ -0.85
SHMT2-208ENST00000553868 VPS13BQ7Z7G8 4022 aa9.76□□□□□ -0.85
SHMT2-208ENST00000553868 IGLV5-45A0A087WSX0 123 aa9.76□□□□□ -0.85
SHMT2-208ENST00000553868 CLPSL2Q6UWE3 100 aa9.76□□□□□ -0.85
SHMT2-208ENST00000553868 C10orf126Q8N4M7 172 aa9.76□□□□□ -0.85
SHMT2-208ENST00000553868 TRAV8-4A0A0B4J246 113 aa9.75□□□□□ -0.85
SHMT2-208ENST00000553868 TSTD3H0UI37 97 aa9.75□□□□□ -0.85
SHMT2-208ENST00000553868 MIAQ16674 131 aa9.75□□□□□ -0.85
SHMT2-208ENST00000553868 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
SHMT2-208ENST00000553868 Q8N3U1 123 aa9.75□□□□□ -0.85
SHMT2-208ENST00000553868 TMEM223A0PJW6 202 aa9.74□□□□□ -0.85
SHMT2-208ENST00000553868 E9PLD3 99 aa9.74□□□□□ -0.85
SHMT2-208ENST00000553868 C1orf134Q5TEV5 83 aa9.74□□□□□ -0.85
SHMT2-208ENST00000553868 UBE2WQ96B02 151 aa9.74□□□□□ -0.85
SHMT2-208ENST00000553868 Q9H8V8 135 aa9.74□□□□□ -0.85
SHMT2-208ENST00000553868 ANKRD39Q53RE8 183 aa9.73□□□□□ -0.85
SHMT2-208ENST00000553868 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
SHMT2-208ENST00000553868 CDKN2A-AS1Q9UH64 79 aa9.73□□□□□ -0.85
SHMT2-208ENST00000553868 XCL1P47992 114 aa9.72□□□□□ -0.85
SHMT2-208ENST00000553868 NMUP48645 174 aa9.72□□□□□ -0.85
SHMT2-208ENST00000553868 COX6A2Q02221 97 aa9.72□□□□□ -0.85
SHMT2-208ENST00000553868 CD164L2Q6UWJ8 174 aa9.72□□□□□ -0.85
SHMT2-208ENST00000553868 ENHOQ6UWT2 76 aa9.72□□□□□ -0.85
SHMT2-208ENST00000553868 LINC01561Q8N1V8 128 aa9.72□□□□□ -0.85
SHMT2-208ENST00000553868 CHCHD10Q8WYQ3 142 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-208ENST00000553868 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
SHMT2-208ENST00000553868 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
SHMT2-208ENST00000553868 RMI2Q96E14 147 aa9.71□□□□□ -0.86
SHMT2-208ENST00000553868 A0A087WZ39 114 aa9.7□□□□□ -0.86
SHMT2-208ENST00000553868 IGHV1-58A0A0C4DH39 117 aa9.7□□□□□ -0.86
SHMT2-208ENST00000553868 IBA57-AS1B1ANH7 110 aa9.7□□□□□ -0.86
SHMT2-208ENST00000553868 LEPROTO15243 131 aa9.7□□□□□ -0.86
SHMT2-208ENST00000553868 PRO1933Q9H354 126 aa9.7□□□□□ -0.86
SHMT2-208ENST00000553868 UQCR10Q9UDW1 63 aa9.7□□□□□ -0.86
SHMT2-208ENST00000553868 IGLV10-54A0A075B6I4 117 aa9.69□□□□□ -0.86
SHMT2-208ENST00000553868 COX7A2LO14548 114 aa9.69□□□□□ -0.86
SHMT2-208ENST00000553868 SPINK8P0C7L1 97 aa9.69□□□□□ -0.86
SHMT2-208ENST00000553868 COX8AP10176 69 aa9.69□□□□□ -0.86
SHMT2-208ENST00000553868 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
SHMT2-208ENST00000553868 TTC32Q5I0X7 151 aa9.69□□□□□ -0.86
SHMT2-208ENST00000553868 SLC25A34Q6PIV7 304 aa9.69□□□□□ -0.86
SHMT2-208ENST00000553868 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
SHMT2-208ENST00000553868 GAGE12HA6NDE8 117 aa9.68□□□□□ -0.86
SHMT2-208ENST00000553868 DLEU1O43261 78 aa9.68□□□□□ -0.86
SHMT2-208ENST00000553868 C14orf144Q96I85 54 aa9.68□□□□□ -0.86
SHMT2-208ENST00000553868 IGKV2D-26A0A0A0MRZ7 120 aa9.67□□□□□ -0.86
SHMT2-208ENST00000553868 IGLV5-39A0A0G2JS06 123 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms