RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
ACTN1-210ENST00000553779 VPS25Q9BRG1 176 aa6.36□□□□□ -1.39
ACTN1-210ENST00000553779 SSBP4Q9BWG4 385 aaPredicted RBP6.36□□□□□ -1.39
ACTN1-210ENST00000553779 CST9LQ9H4G1 147 aa6.36□□□□□ -1.39
ACTN1-210ENST00000553779 K7EN84 100 aa6.35□□□□□ -1.39
ACTN1-210ENST00000553779 CNBPP62633 177 aaKnown RBP6.35□□□□□ -1.39
ACTN1-210ENST00000553779 CFAP161Q6P656 301 aa6.35□□□□□ -1.39
ACTN1-210ENST00000553779 SLC25A34Q6PIV7 304 aa6.35□□□□□ -1.39
ACTN1-210ENST00000553779 SDIM1Q6ZPB5 146 aa6.35□□□□□ -1.39
ACTN1-210ENST00000553779 C18orf32Q8TCD1 76 aa6.35□□□□□ -1.39
ACTN1-210ENST00000553779 RNF185Q96GF1 192 aa6.35□□□□□ -1.39
ACTN1-210ENST00000553779 MLST8Q9BVC4 326 aa6.35□□□□□ -1.39
ACTN1-210ENST00000553779 UBR4Q5T4S7 5183 aa6.34□□□□□ -1.39
ACTN1-210ENST00000553779 PANO1I0J062 215 aa6.34□□□□□ -1.39
ACTN1-210ENST00000553779 M0QY20 66 aa6.34□□□□□ -1.39
ACTN1-210ENST00000553779 CHTF8P0CG12 524 aa6.34□□□□□ -1.39
ACTN1-210ENST00000553779 HINT1P49773 126 aaPredicted RBP6.34□□□□□ -1.39
ACTN1-210ENST00000553779 CT83Q5H943 113 aa6.34□□□□□ -1.39
ACTN1-210ENST00000553779 Q6ZRU5 148 aa6.34□□□□□ -1.39
ACTN1-210ENST00000553779 KIF25-AS1Q9Y6Z4 181 aa6.34□□□□□ -1.39
ACTN1-210ENST00000553779 IGLV4-60A0A075B6I1 120 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 A0A087WYN8 130 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 IGKV2-24A0A0C4DH68 120 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 F2Z2F3 143 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 MAJINQ3KP22 176 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 RNASEKQ6P5S7 137 aaKnown RBP6.33□□□□□ -1.4
ACTN1-210ENST00000553779 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 GTSF1Q8WW33 167 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 NUDT11Q96G61 164 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 PGLYRP4Q96LB8 373 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
ACTN1-210ENST00000553779 A0A1B0GUV1 79 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 A6NDN8 102 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 TAX1BP3O14907 124 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 IGLC6P0CF74 106 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 TWIST1Q15672 202 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 BVES-AS1Q5T3Y7 98 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 LYZL1Q6UWQ5 148 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 SPACA4Q8TDM5 124 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 MAP1LC3CQ9BXW4 147 aa6.32□□□□□ -1.4
ACTN1-210ENST00000553779 A0A1B0GW15 77 aa6.31□□□□□ -1.4
ACTN1-210ENST00000553779 A8MWL6 223 aa6.31□□□□□ -1.4
ACTN1-210ENST00000553779 SYS1-DBNDD2H3BUS1 97 aa6.31□□□□□ -1.4
ACTN1-210ENST00000553779 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
ACTN1-210ENST00000553779 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
ACTN1-210ENST00000553779 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
ACTN1-210ENST00000553779 GAGE10A6NGK3 116 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 TMEM238C9JI98 176 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 H3BRM9 83 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 LEPROTL1O95214 131 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 NTF3P20783 257 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 COX6A2Q02221 97 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
ACTN1-210ENST00000553779 RNF151Q2KHN1 245 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 MTURNQ8N3F0 131 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 TMEM101Q96IK0 257 aa6.3□□□□□ -1.4
ACTN1-210ENST00000553779 TRAV26-2A0A0B4J265 109 aa6.29□□□□□ -1.4
ACTN1-210ENST00000553779 A0A1B0GXF2 115 aa6.29□□□□□ -1.4
ACTN1-210ENST00000553779 HBBP68871 147 aa6.29□□□□□ -1.4
ACTN1-210ENST00000553779 C15orf56Q8N910 161 aa6.29□□□□□ -1.4
ACTN1-210ENST00000553779 CHCHD10Q8WYQ3 142 aaPredicted RBP6.29□□□□□ -1.4
ACTN1-210ENST00000553779 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.28□□□□□ -1.4
ACTN1-210ENST00000553779 IGKV2-29A2NJV5 120 aaPredicted RBP6.28□□□□□ -1.4
ACTN1-210ENST00000553779 C19orf71A6NCJ1 209 aa6.28□□□□□ -1.4
ACTN1-210ENST00000553779 C9orf118A6NHY6 69 aa6.28□□□□□ -1.4
ACTN1-210ENST00000553779 J3QR89 54 aa6.28□□□□□ -1.4
ACTN1-210ENST00000553779 COX8AP10176 69 aa6.28□□□□□ -1.4
ACTN1-210ENST00000553779 FOXA3P55318 350 aaPredicted RBP6.28□□□□□ -1.4
ACTN1-210ENST00000553779 FAM19A2Q8N3H0 131 aa6.28□□□□□ -1.4
ACTN1-210ENST00000553779 NUP35Q8NFH5 326 aa6.28□□□□□ -1.4
ACTN1-210ENST00000553779 RNASE7Q9H1E1 156 aaKnown RBP6.28□□□□□ -1.4
ACTN1-210ENST00000553779 RPP21Q9H633 154 aaKnown RBP6.28□□□□□ -1.4
ACTN1-210ENST00000553779 PLAC8Q9NZF1 115 aa6.28□□□□□ -1.4
ACTN1-210ENST00000553779 NCR2O95944 276 aa6.27□□□□□ -1.41
ACTN1-210ENST00000553779 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
ACTN1-210ENST00000553779 XCL1P47992 114 aa6.27□□□□□ -1.41
ACTN1-210ENST00000553779 KIAA1644Q3SXP7 199 aa6.27□□□□□ -1.41
ACTN1-210ENST00000553779 LINC01545Q5VT33 79 aa6.27□□□□□ -1.41
ACTN1-210ENST00000553779 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
ACTN1-210ENST00000553779 LINC00474Q9P2X8 69 aa6.27□□□□□ -1.41
ACTN1-210ENST00000553779 SLPIP03973 132 aa6.26□□□□□ -1.41
ACTN1-210ENST00000553779 FGF6P10767 208 aa6.26□□□□□ -1.41
ACTN1-210ENST00000553779 PRR3P79522 188 aaKnown RBP6.26□□□□□ -1.41
ACTN1-210ENST00000553779 REG3GQ6UW15 175 aa6.26□□□□□ -1.41
ACTN1-210ENST00000553779 PRSS3P2Q8NHM4 247 aa6.26□□□□□ -1.41
ACTN1-210ENST00000553779 RPL39LQ96EH5 51 aaKnown RBP6.26□□□□□ -1.41
ACTN1-210ENST00000553779 CARD19Q96LW7 228 aa6.26□□□□□ -1.41
ACTN1-210ENST00000553779 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
ACTN1-210ENST00000553779 SDHAF1A6NFY7 115 aa6.25□□□□□ -1.41
ACTN1-210ENST00000553779 H7C423 109 aa6.25□□□□□ -1.41
ACTN1-210ENST00000553779 ZNF561-AS1K7EIQ3 104 aa6.25□□□□□ -1.41
ACTN1-210ENST00000553779 HSD52Q0P140 79 aa6.25□□□□□ -1.41
ACTN1-210ENST00000553779 A0A096LNI7 61 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 IGHV1-58A0A0C4DH39 117 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 TMEM238LA0A1B0GVL6 79 aa6.24□□□□□ -1.41
ACTN1-210ENST00000553779 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms