RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 PTPRZ1P23471 2315 aaPredicted RBP0.58□□□□□ -2.32
PCNX4-206ENST00000553513 ATOX1O00244 68 aa0.58□□□□□ -2.32
PCNX4-206ENST00000553513 MT-ATP8P03928 68 aa0.58□□□□□ -2.32
PCNX4-206ENST00000553513 PMCHL1Q16048 86 aa0.58□□□□□ -2.32
PCNX4-206ENST00000553513 C10orf113Q5VZT2 155 aa0.58□□□□□ -2.32
PCNX4-206ENST00000553513 F8P00451 2351 aa0.58□□□□□ -2.32
PCNX4-206ENST00000553513 ABCA12Q86UK0 2595 aa0.58□□□□□ -2.32
PCNX4-206ENST00000553513 FAM208BQ5VWN6 2430 aa0.58□□□□□ -2.32
PCNX4-206ENST00000553513 A0A0G2JND7 137 aa0.57□□□□□ -2.32
PCNX4-206ENST00000553513 SPRR4Q96PI1 79 aa0.57□□□□□ -2.32
PCNX4-206ENST00000553513 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
PCNX4-206ENST00000553513 TOPAZ1Q8N9V7 1692 aa0.56□□□□□ -2.32
PCNX4-206ENST00000553513 ARHGEF12Q9NZN5 1544 aa0.56□□□□□ -2.32
PCNX4-206ENST00000553513 UQCRHP07919 91 aa0.56□□□□□ -2.32
PCNX4-206ENST00000553513 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
PCNX4-206ENST00000553513 PSMG4Q5JS54 123 aa0.56□□□□□ -2.32
PCNX4-206ENST00000553513 COL5A1-AS1Q5SY13 56 aa0.56□□□□□ -2.32
PCNX4-206ENST00000553513 CACFD1Q9UGQ2 172 aa0.56□□□□□ -2.32
PCNX4-206ENST00000553513 DIP2CQ9Y2E4 1556 aa0.56□□□□□ -2.32
PCNX4-206ENST00000553513 PLCE1Q9P212 2302 aa0.55□□□□□ -2.32
PCNX4-206ENST00000553513 FYCO1Q9BQS8 1478 aa0.55□□□□□ -2.32
PCNX4-206ENST00000553513 WFDC2Q14508 124 aa0.55□□□□□ -2.32
PCNX4-206ENST00000553513 U3KQA8 63 aa0.55□□□□□ -2.32
PCNX4-206ENST00000553513 POLQO75417 2590 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 PDCD11Q14690 1871 aaKnown RBP0.54□□□□□ -2.32
PCNX4-206ENST00000553513 ARHGEF5Q12774 1597 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 PIEZO1Q92508 2521 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 TRBV7-4A0A0J9YYF1 115 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 C7orf77A4D0Y5 90 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 TRGV9Q99603 122 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 GAPVD1Q14C86 1478 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 MRC2Q9UBG0 1479 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 NAV2Q8IVL1 2488 aa0.54□□□□□ -2.32
PCNX4-206ENST00000553513 MYO7BQ6PIF6 2116 aa0.53□□□□□ -2.32
PCNX4-206ENST00000553513 BIVM-ERCC5R4GMW8 1640 aa0.53□□□□□ -2.32
PCNX4-206ENST00000553513 GOLGA4Q13439 2230 aaKnown RBP0.53□□□□□ -2.32
PCNX4-206ENST00000553513 CHD1O14646 1710 aa0.53□□□□□ -2.32
PCNX4-206ENST00000553513 SPTBN2O15020 2390 aa0.53□□□□□ -2.32
PCNX4-206ENST00000553513 TRBV25-1A0A075B6N4 114 aa0.53□□□□□ -2.32
PCNX4-206ENST00000553513 FAUP35544 74 aaKnown RBP0.53□□□□□ -2.32
PCNX4-206ENST00000553513 LINC01600Q96MT4 127 aa0.53□□□□□ -2.32
PCNX4-206ENST00000553513 LINC00846Q9NV44 126 aa0.53□□□□□ -2.32
PCNX4-206ENST00000553513 TEX14Q8IWB6 1497 aa0.53□□□□□ -2.33
PCNX4-206ENST00000553513 MLH3Q9UHC1 1453 aa0.53□□□□□ -2.33
PCNX4-206ENST00000553513 NHSL1Q5SYE7 1610 aa0.53□□□□□ -2.33
PCNX4-206ENST00000553513 UQCRHLA0A096LP55 91 aa0.52□□□□□ -2.33
PCNX4-206ENST00000553513 H3BQF6 201 aa0.52□□□□□ -2.33
PCNX4-206ENST00000553513 PKIAP61925 76 aa0.52□□□□□ -2.33
PCNX4-206ENST00000553513 SERP2Q8N6R1 65 aa0.52□□□□□ -2.33
PCNX4-206ENST00000553513 NSD3Q9BZ95 1437 aa0.52□□□□□ -2.33
PCNX4-206ENST00000553513 ADGRL2O95490 1459 aa0.52□□□□□ -2.33
PCNX4-206ENST00000553513 DEFB109BQ30KR1 87 aa0.51□□□□□ -2.33
PCNX4-206ENST00000553513 ZNF720Q7Z2F6 126 aa0.51□□□□□ -2.33
PCNX4-206ENST00000553513 ANKRD36BQ8N2N9 1353 aa0.51□□□□□ -2.33
PCNX4-206ENST00000553513 MAGI1Q96QZ7 1491 aaPredicted RBP0.51□□□□□ -2.33
PCNX4-206ENST00000553513 IGF2RP11717 2491 aa0.5□□□□□ -2.33
PCNX4-206ENST00000553513 VPS8Q8N3P4 1428 aa0.5□□□□□ -2.33
PCNX4-206ENST00000553513 A0A087WVE0 104 aa0.5□□□□□ -2.33
PCNX4-206ENST00000553513 I3L2K1 104 aa0.5□□□□□ -2.33
PCNX4-206ENST00000553513 GNGT1P63211 74 aa0.5□□□□□ -2.33
PCNX4-206ENST00000553513 Q9H521 79 aa0.5□□□□□ -2.33
PCNX4-206ENST00000553513 SCN7AQ01118 1682 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 PRDM15P57071 1507 aaPredicted RBP0.49□□□□□ -2.33
PCNX4-206ENST00000553513 C1orf167Q5SNV9 1468 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 ABCC10Q5T3U5 1492 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 SYS1-DBNDD2H3BUS1 97 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 COX6B1P14854 86 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 ASIPP42127 132 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 Q5VSD8 79 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 LCN9Q8WX39 176 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 USMG5Q96IX5 58 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 SNHG12Q9BXW3 62 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 LAMC1P11047 1609 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 PAPPAQ13219 1627 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 SETBP1Q9Y6X0 1596 aa0.49□□□□□ -2.33
PCNX4-206ENST00000553513 C2CD3Q4AC94 2353 aa0.48□□□□□ -2.33
PCNX4-206ENST00000553513 NUP188Q5SRE5 1749 aa0.48□□□□□ -2.33
PCNX4-206ENST00000553513 COL4A6Q14031 1691 aa0.48□□□□□ -2.33
PCNX4-206ENST00000553513 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
PCNX4-206ENST00000553513 DOPEY2Q9Y3R5 2298 aa0.47□□□□□ -2.33
PCNX4-206ENST00000553513 A0A1B0GU69 56 aa0.47□□□□□ -2.33
PCNX4-206ENST00000553513 ABCC2Q92887 1545 aa0.47□□□□□ -2.33
PCNX4-206ENST00000553513 RAPGEF2Q9Y4G8 1499 aa0.47□□□□□ -2.33
PCNX4-206ENST00000553513 UNC79Q9P2D8 2635 aa0.47□□□□□ -2.33
PCNX4-206ENST00000553513 USF3Q68DE3 2245 aa0.46□□□□□ -2.34
PCNX4-206ENST00000553513 CCNB3Q8WWL7 1395 aa0.46□□□□□ -2.34
PCNX4-206ENST00000553513 H7BZZ5 65 aa0.46□□□□□ -2.34
PCNX4-206ENST00000553513 COX8AP10176 69 aa0.46□□□□□ -2.34
PCNX4-206ENST00000553513 SMIM11AP58511 58 aa0.46□□□□□ -2.34
PCNX4-206ENST00000553513 DEFB107AQ8IZN7 70 aa0.46□□□□□ -2.34
PCNX4-206ENST00000553513 ZFYVE26Q68DK2 2539 aa0.46□□□□□ -2.34
PCNX4-206ENST00000553513 CCDC141Q6ZP82 1450 aa0.46□□□□□ -2.34
PCNX4-206ENST00000553513 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 LINC00959A0A1B0GUT2 108 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 H0Y9P7 68 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 GYPAP02724 150 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 ARMS2P0C7Q2 107 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 SPRR1AP35321 89 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 HMGN3Q15651 99 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 ETDBQ3ZM63 59 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms