RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
GCN1-209ENST00000551920 UBE2D1P51668 147 aa10.56□□□□□ -0.72
GCN1-209ENST00000551920 LINC00242Q5T6M2 205 aa10.56□□□□□ -0.72
GCN1-209ENST00000551920 C9orf163Q8N9P6 203 aa10.56□□□□□ -0.72
GCN1-209ENST00000551920 TRGC2P03986 189 aa10.55□□□□□ -0.72
GCN1-209ENST00000551920 G0S2P27469 103 aa10.55□□□□□ -0.72
GCN1-209ENST00000551920 COX6A2Q02221 97 aa10.55□□□□□ -0.72
GCN1-209ENST00000551920 PMCHL1Q16048 86 aa10.55□□□□□ -0.72
GCN1-209ENST00000551920 Q6ZN92 141 aa10.55□□□□□ -0.72
GCN1-209ENST00000551920 ERASQ7Z444 233 aa10.55□□□□□ -0.72
GCN1-209ENST00000551920 SCGB3A1Q96QR1 104 aa10.55□□□□□ -0.72
GCN1-209ENST00000551920 LINC00614P0C842 121 aa10.54□□□□□ -0.72
GCN1-209ENST00000551920 VCX2Q9H322 139 aa10.54□□□□□ -0.72
GCN1-209ENST00000551920 FAT1Q14517 4588 aa10.54□□□□□ -0.72
GCN1-209ENST00000551920 C2orf88Q9BSF0 95 aa10.53□□□□□ -0.72
GCN1-209ENST00000551920 MALP21145 153 aa10.52□□□□□ -0.73
GCN1-209ENST00000551920 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.73
GCN1-209ENST00000551920 KRTAP4-5Q9BYR2 181 aa10.52□□□□□ -0.73
GCN1-209ENST00000551920 PANO1I0J062 215 aa10.51□□□□□ -0.73
GCN1-209ENST00000551920 FAM19A3Q7Z5A8 133 aa10.51□□□□□ -0.73
GCN1-209ENST00000551920 IGLV4-69A0A075B6H9 119 aa10.5□□□□□ -0.73
GCN1-209ENST00000551920 A0A087WZ39 114 aa10.5□□□□□ -0.73
GCN1-209ENST00000551920 HBDP02042 147 aa10.5□□□□□ -0.73
GCN1-209ENST00000551920 PAPPA-AS1Q5QFB9 102 aa10.5□□□□□ -0.73
GCN1-209ENST00000551920 SCXQ7RTU7 201 aa10.5□□□□□ -0.73
GCN1-209ENST00000551920 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.5□□□□□ -0.73
GCN1-209ENST00000551920 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
GCN1-209ENST00000551920 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.49□□□□□ -0.73
GCN1-209ENST00000551920 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
GCN1-209ENST00000551920 LINC00310P59036 64 aa10.49□□□□□ -0.73
GCN1-209ENST00000551920 RAB5BP61020 215 aa10.49□□□□□ -0.73
GCN1-209ENST00000551920 SPAG11BQ08648 103 aa10.49□□□□□ -0.73
GCN1-209ENST00000551920 PDZD11Q5EBL8 140 aa10.49□□□□□ -0.73
GCN1-209ENST00000551920 ZNF561-AS1K7EIQ3 104 aa10.48□□□□□ -0.73
GCN1-209ENST00000551920 Q8N1X5 172 aa10.48□□□□□ -0.73
GCN1-209ENST00000551920 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
GCN1-209ENST00000551920 CST9LQ9H4G1 147 aa10.48□□□□□ -0.73
GCN1-209ENST00000551920 ABCA13Q86UQ4 5058 aa10.47□□□□□ -0.73
GCN1-209ENST00000551920 A0A0J9YXV3 536 aa10.47□□□□□ -0.73
GCN1-209ENST00000551920 APOMO95445 188 aa10.47□□□□□ -0.73
GCN1-209ENST00000551920 CHTF8P0CG12 524 aa10.47□□□□□ -0.73
GCN1-209ENST00000551920 OR10D4PQ8NGN7 298 aa10.47□□□□□ -0.73
GCN1-209ENST00000551920 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
GCN1-209ENST00000551920 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
GCN1-209ENST00000551920 CHAC1Q9BUX1 264 aa10.47□□□□□ -0.73
GCN1-209ENST00000551920 PCLOQ9Y6V0 5065 aa10.47□□□□□ -0.73
GCN1-209ENST00000551920 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.46□□□□□ -0.73
GCN1-209ENST00000551920 SMR3BP02814 79 aaPredicted RBP10.46□□□□□ -0.73
GCN1-209ENST00000551920 SYCNQ0VAF6 134 aa10.46□□□□□ -0.73
GCN1-209ENST00000551920 Q6ZRU5 148 aa10.46□□□□□ -0.73
GCN1-209ENST00000551920 CIRBP-AS1Q8TBR5 109 aa10.46□□□□□ -0.73
GCN1-209ENST00000551920 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
GCN1-209ENST00000551920 KIAA0087Q14695 138 aa10.45□□□□□ -0.74
GCN1-209ENST00000551920 PMVKQ15126 192 aa10.45□□□□□ -0.74
GCN1-209ENST00000551920 BAGE3Q86Y29 109 aa10.45□□□□□ -0.74
GCN1-209ENST00000551920 C2orf48Q96LS8 159 aa10.45□□□□□ -0.74
GCN1-209ENST00000551920 CDKN2A-AS1Q9UH64 79 aa10.45□□□□□ -0.74
GCN1-209ENST00000551920 SERF1AO75920 110 aa10.44□□□□□ -0.74
GCN1-209ENST00000551920 HERVK_113P63121 156 aa10.44□□□□□ -0.74
GCN1-209ENST00000551920 CAMK2N2Q96S95 79 aa10.44□□□□□ -0.74
GCN1-209ENST00000551920 IGLV5-45A0A087WSX0 123 aa10.43□□□□□ -0.74
GCN1-209ENST00000551920 TINCRA0A1B0GVN0 87 aa10.43□□□□□ -0.74
GCN1-209ENST00000551920 ATP6V1G1O75348 118 aa10.43□□□□□ -0.74
GCN1-209ENST00000551920 LINC01561Q8N1V8 128 aa10.43□□□□□ -0.74
GCN1-209ENST00000551920 FAM19A2Q8N3H0 131 aa10.43□□□□□ -0.74
GCN1-209ENST00000551920 SPACA4Q8TDM5 124 aa10.43□□□□□ -0.74
GCN1-209ENST00000551920 GEMIN7Q9H840 131 aaKnown RBP10.43□□□□□ -0.74
GCN1-209ENST00000551920 A0A096LNI7 61 aa10.42□□□□□ -0.74
GCN1-209ENST00000551920 NUPR1O60356 82 aa10.42□□□□□ -0.74
GCN1-209ENST00000551920 SEC11AP67812 179 aa10.42□□□□□ -0.74
GCN1-209ENST00000551920 C10orf25Q5T742 122 aa10.42□□□□□ -0.74
GCN1-209ENST00000551920 LINC00469Q8N7U9 141 aa10.42□□□□□ -0.74
GCN1-209ENST00000551920 HSBP1O75506 76 aa10.41□□□□□ -0.74
GCN1-209ENST00000551920 ATP5LO75964 103 aa10.41□□□□□ -0.74
GCN1-209ENST00000551920 VPS13BQ7Z7G8 4022 aa10.4□□□□□ -0.74
GCN1-209ENST00000551920 SMIM1B2RUZ4 78 aa10.4□□□□□ -0.74
GCN1-209ENST00000551920 IGLC3P0DOY3 106 aa10.4□□□□□ -0.74
GCN1-209ENST00000551920 NDUFA6P56556 154 aa10.4□□□□□ -0.74
GCN1-209ENST00000551920 Q5VSD8 79 aa10.4□□□□□ -0.74
GCN1-209ENST00000551920 C2orf82Q6UX34 121 aa10.4□□□□□ -0.74
GCN1-209ENST00000551920 IGKV2-24A0A0C4DH68 120 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BKO60814 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BJP06899 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BOP23527 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BBP33778 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BDP58876 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BCP62807 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST2H2BEQ16778 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.39□□□□□ -0.75
GCN1-209ENST00000551920 UNQ6190/PRO20217Q6UXQ8 127 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BHQ93079 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BNQ99877 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 HIST1H2BMQ99879 126 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 C6orf48Q9UBA6 75 aa10.39□□□□□ -0.75
GCN1-209ENST00000551920 NDUFA1O15239 70 aa10.38□□□□□ -0.75
GCN1-209ENST00000551920 LINC00528Q8N1L1 170 aa10.38□□□□□ -0.75
GCN1-209ENST00000551920 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
GCN1-209ENST00000551920 MRPL35Q9NZE8 188 aaKnown RBP10.38□□□□□ -0.75
GCN1-209ENST00000551920 SRRM2Q9UQ35 2752 aaKnown RBP10.38□□□□□ -0.75
GCN1-209ENST00000551920 A0A087WYN8 130 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms