RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 PPP1R17O96001 155 aa8.91□□□□□ -0.98
TMEM106C-216ENST00000551305 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
TMEM106C-216ENST00000551305 TMEM18Q96B42 140 aa8.91□□□□□ -0.98
TMEM106C-216ENST00000551305 IMMP2LQ96T52 175 aa8.91□□□□□ -0.98
TMEM106C-216ENST00000551305 IGHV3OR16-9A0A0B4J2B5 98 aa8.9□□□□□ -0.98
TMEM106C-216ENST00000551305 ZNF727A8MUV8 499 aa8.9□□□□□ -0.98
TMEM106C-216ENST00000551305 NDUFA1O15239 70 aa8.9□□□□□ -0.98
TMEM106C-216ENST00000551305 EIF5A2Q9GZV4 153 aaKnown RBP8.9□□□□□ -0.98
TMEM106C-216ENST00000551305 PPP1R2P9O14990 202 aa8.89□□□□□ -0.99
TMEM106C-216ENST00000551305 TLX1NBP0CAT3 122 aa8.89□□□□□ -0.99
TMEM106C-216ENST00000551305 PRR4Q16378 134 aa8.89□□□□□ -0.99
TMEM106C-216ENST00000551305 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
TMEM106C-216ENST00000551305 IGLV1-50A0A075B6I6 118 aa8.88□□□□□ -0.99
TMEM106C-216ENST00000551305 TMEM241Q24JQ0 296 aa8.88□□□□□ -0.99
TMEM106C-216ENST00000551305 F8WDY8 70 aa8.87□□□□□ -0.99
TMEM106C-216ENST00000551305 SRP19P09132 144 aaKnown RBP8.87□□□□□ -0.99
TMEM106C-216ENST00000551305 SMDT1Q9H4I9 107 aa8.87□□□□□ -0.99
TMEM106C-216ENST00000551305 UBE2BP63146 152 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 C20orf78Q9BR46 151 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 NAT8BQ9UHF3 227 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 TRBV24-1A0A075B6N3 115 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 IFITM10A6NMD0 228 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 M0QXV9 152 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 TCAPO15273 167 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 TNFRSF6BO95407 300 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 CKS2P33552 79 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 UBE2D1P51668 147 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 HBBP68871 147 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 KIAA0087Q14695 138 aa8.86□□□□□ -0.99
TMEM106C-216ENST00000551305 MUC2Q02817 5179 aa8.85□□□□□ -0.99
TMEM106C-216ENST00000551305 LINC00862A6NCI5 91 aa8.85□□□□□ -0.99
TMEM106C-216ENST00000551305 RPL32P62910 135 aaKnown RBP8.85□□□□□ -0.99
TMEM106C-216ENST00000551305 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
TMEM106C-216ENST00000551305 FAM74A3Q4VXF1 159 aa8.85□□□□□ -0.99
TMEM106C-216ENST00000551305 SMIM2Q9BVW6 85 aa8.85□□□□□ -0.99
TMEM106C-216ENST00000551305 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
TMEM106C-216ENST00000551305 RPL23P62829 140 aaKnown RBP8.84□□□□□ -0.99
TMEM106C-216ENST00000551305 C9orf129Q5T035 196 aaKnown RBP8.84□□□□□ -0.99
TMEM106C-216ENST00000551305 C2orf82Q6UX34 121 aa8.84□□□□□ -0.99
TMEM106C-216ENST00000551305 SMIM27A0A1W2PRY6 76 aa8.83□□□□□ -1
TMEM106C-216ENST00000551305 D6R8Y8 96 aa8.83□□□□□ -1
TMEM106C-216ENST00000551305 NPYP01303 97 aa8.83□□□□□ -1
TMEM106C-216ENST00000551305 LCE2AQ5TA79 106 aaPredicted RBP8.83□□□□□ -1
TMEM106C-216ENST00000551305 TGIF2-C20orf24A0A0A6YYL0 155 aa8.82□□□□□ -1
TMEM106C-216ENST00000551305 LINC00242Q5T6M2 205 aa8.82□□□□□ -1
TMEM106C-216ENST00000551305 TSPAN13O95857 204 aa8.81□□□□□ -1
TMEM106C-216ENST00000551305 ADIRFQ15847 76 aa8.81□□□□□ -1
TMEM106C-216ENST00000551305 TRBV30A0A0K0K1B3 111 aa8.8□□□□□ -1
TMEM106C-216ENST00000551305 NDUFC2-KCTD14E9PQ53 114 aa8.8□□□□□ -1
TMEM106C-216ENST00000551305 RPL13AP40429 203 aaKnown RBP8.8□□□□□ -1
TMEM106C-216ENST00000551305 MRPL54Q6P161 138 aaKnown RBP8.8□□□□□ -1
TMEM106C-216ENST00000551305 C9JQL5 133 aa8.79□□□□□ -1
TMEM106C-216ENST00000551305 ZNF861PO60384 105 aa8.79□□□□□ -1
TMEM106C-216ENST00000551305 KRTAP9-2Q9BYQ4 174 aa8.79□□□□□ -1
TMEM106C-216ENST00000551305 CARHSP1Q9Y2V2 147 aaKnown RBP8.79□□□□□ -1
TMEM106C-216ENST00000551305 IGLV4-3A0A075B6K6 122 aa8.78□□□□□ -1
TMEM106C-216ENST00000551305 A0A1B0GW15 77 aa8.78□□□□□ -1
TMEM106C-216ENST00000551305 IFI27P40305 119 aaPredicted RBP8.78□□□□□ -1
TMEM106C-216ENST00000551305 ZC2HC1BQ5TFG8 222 aa8.78□□□□□ -1
TMEM106C-216ENST00000551305 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
TMEM106C-216ENST00000551305 PACRGQ96M98 296 aaPredicted RBP8.78□□□□□ -1
TMEM106C-216ENST00000551305 AKAP14Q86UN6 197 aa8.77□□□□□ -1.01
TMEM106C-216ENST00000551305 A0A1B0GXF2 115 aa8.76□□□□□ -1.01
TMEM106C-216ENST00000551305 F8W036 122 aa8.76□□□□□ -1.01
TMEM106C-216ENST00000551305 RAB5AP20339 215 aa8.76□□□□□ -1.01
TMEM106C-216ENST00000551305 NAT8Q9UHE5 227 aa8.76□□□□□ -1.01
TMEM106C-216ENST00000551305 PYGO1Q9Y3Y4 419 aa8.76□□□□□ -1.01
TMEM106C-216ENST00000551305 C22orf24Q9Y442 160 aa8.76□□□□□ -1.01
TMEM106C-216ENST00000551305 hCG_2014768A0A024R1R8 64 aa8.75□□□□□ -1.01
TMEM106C-216ENST00000551305 SRSF3P84103 164 aaKnown RBP8.75□□□□□ -1.01
TMEM106C-216ENST00000551305 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
TMEM106C-216ENST00000551305 CTDSP1Q9GZU7 261 aa8.75□□□□□ -1.01
TMEM106C-216ENST00000551305 TMEM136Q6ZRR5 245 aa8.74□□□□□ -1.01
TMEM106C-216ENST00000551305 XAGE1AQ9HD64 81 aa8.74□□□□□ -1.01
TMEM106C-216ENST00000551305 TOMM7Q9P0U1 55 aa8.74□□□□□ -1.01
TMEM106C-216ENST00000551305 A0A087X002 238 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 LOC389332A0A1B0GUA5 103 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 PPBPP02775 128 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 S100A8P05109 93 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 TEX43Q6ZNM6 134 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 ORMDL3Q8N138 153 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 PRELID3AQ96N28 172 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 NUPR1O60356 82 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 PRSS2P07478 247 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 LINC01561Q8N1V8 128 aa8.73□□□□□ -1.01
TMEM106C-216ENST00000551305 CKS1BP61024 79 aa8.72□□□□□ -1.01
TMEM106C-216ENST00000551305 LINC00173Q6ZV60 143 aa8.72□□□□□ -1.01
TMEM106C-216ENST00000551305 LBHQ53QV2 105 aaPredicted RBP8.71□□□□□ -1.02
TMEM106C-216ENST00000551305 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.02
TMEM106C-216ENST00000551305 Q6ZN92 141 aa8.71□□□□□ -1.02
TMEM106C-216ENST00000551305 C2orf88Q9BSF0 95 aa8.71□□□□□ -1.02
TMEM106C-216ENST00000551305 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
TMEM106C-216ENST00000551305 AMELXQ99217 191 aa8.7□□□□□ -1.02
TMEM106C-216ENST00000551305 VCX2Q9H322 139 aa8.7□□□□□ -1.02
TMEM106C-216ENST00000551305 ANAPC11Q9NYG5 84 aa8.7□□□□□ -1.02
TMEM106C-216ENST00000551305 PRSS47A8MTI9 375 aa8.69□□□□□ -1.02
TMEM106C-216ENST00000551305 PEA15Q15121 130 aa8.69□□□□□ -1.02
TMEM106C-216ENST00000551305 C2orf66Q6UXQ4 117 aa8.69□□□□□ -1.02
TMEM106C-216ENST00000551305 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms