RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ARHGAP35Q9NRY4 1499 aa0.76□□□□□ -2.29
CCDC38-208ENST00000549876 GCHFRP30047 84 aa0.76□□□□□ -2.29
CCDC38-208ENST00000549876 HMGN3Q15651 99 aa0.76□□□□□ -2.29
CCDC38-208ENST00000549876 ZNF720Q7Z2F6 126 aa0.76□□□□□ -2.29
CCDC38-208ENST00000549876 FAM223AQ8IWN6 122 aa0.76□□□□□ -2.29
CCDC38-208ENST00000549876 ZDBF2Q9HCK1 2354 aa0.76□□□□□ -2.29
CCDC38-208ENST00000549876 MYH4Q9Y623 1939 aa0.76□□□□□ -2.29
CCDC38-208ENST00000549876 WNK3Q9BYP7 1800 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 NUP188Q5SRE5 1749 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 SSC5DA1L4H1 1573 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 A0A1B0GWA3 101 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 FAM223BA6NKX1 122 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 ZNF815PA8K554 130 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 CYB5AP00167 134 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 PSMG4Q5JS54 123 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 MYO7BQ6PIF6 2116 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 S100A16Q96FQ6 103 aaKnown RBP0.75□□□□□ -2.29
CCDC38-208ENST00000549876 SPRR4Q96PI1 79 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 C20orf78Q9BR46 151 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 PRO1933Q9H354 126 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 LINC00846Q9NV44 126 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 ZNF236Q9UL36 1845 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 MYO3AQ8NEV4 1616 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 MAP3K4Q9Y6R4 1608 aa0.75□□□□□ -2.29
CCDC38-208ENST00000549876 MAGI2Q86UL8 1455 aa0.74□□□□□ -2.29
CCDC38-208ENST00000549876 NLRP1Q9C000 1473 aa0.74□□□□□ -2.29
CCDC38-208ENST00000549876 PEA15Q15121 130 aa0.74□□□□□ -2.29
CCDC38-208ENST00000549876 SFTA2Q6UW10 78 aa0.74□□□□□ -2.29
CCDC38-208ENST00000549876 ALKAL2Q6UX46 152 aa0.74□□□□□ -2.29
CCDC38-208ENST00000549876 TMEM263Q8WUH6 116 aaKnown RBP0.74□□□□□ -2.29
CCDC38-208ENST00000549876 KDM3BQ7LBC6 1761 aa0.74□□□□□ -2.29
CCDC38-208ENST00000549876 SUPT6HQ7KZ85 1726 aaKnown RBP0.74□□□□□ -2.29
CCDC38-208ENST00000549876 SCN7AQ01118 1682 aa0.74□□□□□ -2.29
CCDC38-208ENST00000549876 EDC4Q6P2E9 1401 aaKnown RBP0.73□□□□□ -2.29
CCDC38-208ENST00000549876 PLXNB2O15031 1838 aa0.73□□□□□ -2.29
CCDC38-208ENST00000549876 G3V318 75 aa0.73□□□□□ -2.29
CCDC38-208ENST00000549876 S100A3P33764 101 aa0.73□□□□□ -2.29
CCDC38-208ENST00000549876 ETDBQ3ZM63 59 aa0.73□□□□□ -2.29
CCDC38-208ENST00000549876 S100A13Q99584 98 aa0.73□□□□□ -2.29
CCDC38-208ENST00000549876 LINC00472Q9H8W2 130 aa0.73□□□□□ -2.29
CCDC38-208ENST00000549876 CACNA1CQ13936 2221 aa0.73□□□□□ -2.29
CCDC38-208ENST00000549876 C7orf77A4D0Y5 90 aa0.72□□□□□ -2.29
CCDC38-208ENST00000549876 C10orf142B7Z368 130 aa0.72□□□□□ -2.29
CCDC38-208ENST00000549876 SNRPFP62306 86 aaKnown RBP0.72□□□□□ -2.29
CCDC38-208ENST00000549876 LINC01600Q96MT4 127 aa0.72□□□□□ -2.29
CCDC38-208ENST00000549876 C10orf95Q9H7T3 257 aa0.72□□□□□ -2.29
CCDC38-208ENST00000549876 NAV3Q8IVL0 2385 aa0.72□□□□□ -2.29
CCDC38-208ENST00000549876 POLA1P09884 1462 aaPredicted RBP0.72□□□□□ -2.29
CCDC38-208ENST00000549876 NRXN1Q9ULB1 1477 aa0.72□□□□□ -2.29
CCDC38-208ENST00000549876 MYO7AQ13402 2215 aa0.72□□□□□ -2.29
CCDC38-208ENST00000549876 RRBP1Q9P2E9 1410 aaKnown RBP0.72□□□□□ -2.29
CCDC38-208ENST00000549876 KIF14Q15058 1648 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 CUX1P39880 1505 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 A0A0D9SG42 100 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 KANTRA0A1W2PQU2 76 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 M0R3E3 92 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 ACYP1P07311 99 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 NMBP08949 121 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 ARMS2P0C7Q2 107 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 Q6JHZ5 121 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 UBE2DNLQ8IWF7 75 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 HIGD1BQ9P298 99 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 SHPRHQ149N8 1683 aa0.71□□□□□ -2.3
CCDC38-208ENST00000549876 CADP27708 2225 aa0.7□□□□□ -2.3
CCDC38-208ENST00000549876 UBR1Q8IWV7 1749 aa0.7□□□□□ -2.3
CCDC38-208ENST00000549876 LRRC9Q6ZRR7 1453 aa0.7□□□□□ -2.3
CCDC38-208ENST00000549876 TRBV6-1A0A0K0K1D8 114 aa0.7□□□□□ -2.3
CCDC38-208ENST00000549876 F8WEM9 126 aa0.7□□□□□ -2.3
CCDC38-208ENST00000549876 H3BQF6 201 aa0.7□□□□□ -2.3
CCDC38-208ENST00000549876 HMGN2P05204 90 aaKnown RBP0.7□□□□□ -2.3
CCDC38-208ENST00000549876 HAMPP81172 84 aa0.7□□□□□ -2.3
CCDC38-208ENST00000549876 ADIRFQ15847 76 aa0.7□□□□□ -2.3
CCDC38-208ENST00000549876 CRYBG1Q9Y4K1 1723 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 ERVK-7P63135 1459 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 LEPROTL1O95214 131 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 C10orf113Q5VZT2 155 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 LINC00643Q86TS7 51 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 ST20Q9HBF5 79 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 SPCS1Q9Y6A9 102 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 A0A0G2JMZ2 1700 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 KCPQ6ZWJ8 1503 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 DCAF1Q9Y4B6 1507 aa0.69□□□□□ -2.3
CCDC38-208ENST00000549876 C1orf167Q5SNV9 1468 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 LRP6O75581 1613 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 A0A087WVE0 104 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 A0A0D9SFI3 127 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 D6R8Y8 96 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 PRB3Q04118 309 aaPredicted RBP0.68□□□□□ -2.3
CCDC38-208ENST00000549876 TDRG1Q3Y452 100 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 NMSQ5H8A3 153 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 ERCC6L2Q5T890 1561 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 SPATA8Q6RVD6 105 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 KNDC1Q76NI1 1749 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 MUSTN1Q8IVN3 82 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 XRN1Q8IZH2 1706 aaKnown RBP0.68□□□□□ -2.3
CCDC38-208ENST00000549876 C5P01031 1676 aa0.68□□□□□ -2.3
CCDC38-208ENST00000549876 ASH1LQ9NR48 2969 aaKnown RBP0.67□□□□□ -2.3
CCDC38-208ENST00000549876 AHCTF1Q8WYP5 2266 aa0.67□□□□□ -2.3
CCDC38-208ENST00000549876 DNAJC13O75165 2243 aa0.67□□□□□ -2.3
CCDC38-208ENST00000549876 H0Y9P7 68 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms