RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ZNF625Q96I27 306 aaPredicted RBP6.96□□□□□ -1.3
RAB5B-206ENST00000549505 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
RAB5B-206ENST00000549505 IGHV4-28A0A0C4DH34 117 aa6.95□□□□□ -1.3
RAB5B-206ENST00000549505 LOC100131303A0A0U1RQF7 123 aa6.95□□□□□ -1.3
RAB5B-206ENST00000549505 CDIP1Q9H305 208 aa6.95□□□□□ -1.3
RAB5B-206ENST00000549505 C11orf68Q9H3H3 251 aaKnown RBP6.95□□□□□ -1.3
RAB5B-206ENST00000549505 IGHV4-30-4P0DP06 118 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 FAM222AQ5U5X8 452 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 MYO9AB2RTY4 2548 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 CFC1BP0CG36 223 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 CFC1P0CG37 223 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 MIAQ16674 131 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 ATP6V0E2Q8NHE4 81 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 NDUFA12Q9UI09 145 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.94□□□□□ -1.3
RAB5B-206ENST00000549505 LOC107984156A0A0G2JMH3 177 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 DGAT2L7PQ6IED9 249 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 ARL17AQ8IVW1 177 aa6.94□□□□□ -1.3
RAB5B-206ENST00000549505 FN1P02751 2386 aaKnown RBP6.93□□□□□ -1.3
RAB5B-206ENST00000549505 IGHV3OR16-9A0A0B4J2B5 98 aa6.93□□□□□ -1.3
RAB5B-206ENST00000549505 EIF4EBP3O60516 100 aaPredicted RBP6.93□□□□□ -1.3
RAB5B-206ENST00000549505 UBE2L6O14933 153 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 KRTAP10-11P60412 298 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 HIVEP1P15822 2718 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 A0A087WZ39 114 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 TRAV8-3A0A0A6YYJ7 113 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 CCDC168Q8NDH2 2452 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 LOC107984640A0A0U1RRK4 108 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 SPART-AS1P0CW21 52 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 GYPEP15421 78 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 FOXI1Q12951 378 aa6.92□□□□□ -1.3
RAB5B-206ENST00000549505 SONP18583 2426 aaKnown RBP6.91□□□□□ -1.3
RAB5B-206ENST00000549505 F8W1H4 67 aa6.91□□□□□ -1.3
RAB5B-206ENST00000549505 ATP5G1P05496 136 aa6.91□□□□□ -1.3
RAB5B-206ENST00000549505 RNASE13Q5GAN3 156 aaKnown RBP6.91□□□□□ -1.3
RAB5B-206ENST00000549505 PRO0461Q9UI25 63 aa6.91□□□□□ -1.3
RAB5B-206ENST00000549505 PSMB2P49721 201 aa6.91□□□□□ -1.3
RAB5B-206ENST00000549505 ACANP16112 2415 aa6.91□□□□□ -1.3
RAB5B-206ENST00000549505 SORL1Q92673 2214 aa6.9□□□□□ -1.3
RAB5B-206ENST00000549505 DEFB135Q30KP9 77 aa6.9□□□□□ -1.3
RAB5B-206ENST00000549505 TTC32Q5I0X7 151 aa6.9□□□□□ -1.3
RAB5B-206ENST00000549505 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.3
RAB5B-206ENST00000549505 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
RAB5B-206ENST00000549505 PRO1854Q9UHT4 67 aa6.9□□□□□ -1.3
RAB5B-206ENST00000549505 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.3
RAB5B-206ENST00000549505 NHLRC4P0CG21 123 aaPredicted RBP6.9□□□□□ -1.3
RAB5B-206ENST00000549505 ADAMTSL4-AS1Q5T5F5 129 aa6.9□□□□□ -1.3
RAB5B-206ENST00000549505 CMYA5Q8N3K9 4069 aa6.9□□□□□ -1.31
RAB5B-206ENST00000549505 PAX4O43316 350 aa6.9□□□□□ -1.31
RAB5B-206ENST00000549505 IGHV3-33P01772 117 aa6.9□□□□□ -1.31
RAB5B-206ENST00000549505 MEIG1Q5JSS6 88 aa6.9□□□□□ -1.31
RAB5B-206ENST00000549505 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.31
RAB5B-206ENST00000549505 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
RAB5B-206ENST00000549505 DEFB130BP0DP73 79 aa6.89□□□□□ -1.31
RAB5B-206ENST00000549505 DEFB130AP0DP74 79 aa6.89□□□□□ -1.31
RAB5B-206ENST00000549505 TLN2Q9Y4G6 2542 aa6.89□□□□□ -1.31
RAB5B-206ENST00000549505 A4D1N5 150 aa6.89□□□□□ -1.31
RAB5B-206ENST00000549505 DAD1P61803 113 aa6.89□□□□□ -1.31
RAB5B-206ENST00000549505 CELA1Q9UNI1 258 aa6.89□□□□□ -1.31
RAB5B-206ENST00000549505 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
RAB5B-206ENST00000549505 PRIMA1Q86XR5 153 aa6.88□□□□□ -1.31
RAB5B-206ENST00000549505 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-206ENST00000549505 LELP1Q5T871 98 aa6.88□□□□□ -1.31
RAB5B-206ENST00000549505 GAGE2BQ13066 116 aa6.87□□□□□ -1.31
RAB5B-206ENST00000549505 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
RAB5B-206ENST00000549505 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
RAB5B-206ENST00000549505 PRR34Q9NV39 138 aa6.87□□□□□ -1.31
RAB5B-206ENST00000549505 CIRBPQ14011 172 aaKnown RBP6.87□□□□□ -1.31
RAB5B-206ENST00000549505 NDUFV3P56181 108 aaKnown RBP6.86□□□□□ -1.31
RAB5B-206ENST00000549505 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
RAB5B-206ENST00000549505 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
RAB5B-206ENST00000549505 CHCHD5Q9BSY4 110 aa6.86□□□□□ -1.31
RAB5B-206ENST00000549505 HECTD1Q9ULT8 2610 aa6.86□□□□□ -1.31
RAB5B-206ENST00000549505 TRAV13-1A0A0B4J241 112 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 SNCGO76070 127 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 Q8IZM0 81 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 LINC00308Q8TCZ7 52 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 ICOSQ9Y6W8 199 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 NIPBLQ6KC79 2804 aaeCLIP6.85□□□□□ -1.31
RAB5B-206ENST00000549505 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
RAB5B-206ENST00000549505 MUC7Q8TAX7 377 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 Q9H8V8 135 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 A0A096LPF7 62 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 IBA57-AS1B1ANH7 110 aa6.85□□□□□ -1.31
RAB5B-206ENST00000549505 H7C2G1 150 aa6.84□□□□□ -1.31
RAB5B-206ENST00000549505 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
RAB5B-206ENST00000549505 KLK5Q9Y337 293 aaPredicted RBP6.84□□□□□ -1.31
RAB5B-206ENST00000549505 SS18Q15532 418 aa6.84□□□□□ -1.31
RAB5B-206ENST00000549505 CARD19Q96LW7 228 aa6.83□□□□□ -1.32
RAB5B-206ENST00000549505 OXLD1Q5BKU9 147 aa6.83□□□□□ -1.32
RAB5B-206ENST00000549505 C2CD3Q4AC94 2353 aa6.83□□□□□ -1.32
RAB5B-206ENST00000549505 CXCL5P42830 114 aa6.83□□□□□ -1.32
RAB5B-206ENST00000549505 KIAA0087Q14695 138 aa6.82□□□□□ -1.32
RAB5B-206ENST00000549505 TENM1Q9UKZ4 2725 aa6.82□□□□□ -1.32
RAB5B-206ENST00000549505 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
RAB5B-206ENST00000549505 MTORP42345 2549 aa6.82□□□□□ -1.32
RAB5B-206ENST00000549505 VWFP04275 2813 aa6.82□□□□□ -1.32
RAB5B-206ENST00000549505 SCGB1C2P0DMR2 95 aa6.81□□□□□ -1.32
RAB5B-206ENST00000549505 COX17Q14061 63 aa6.81□□□□□ -1.32
RAB5B-206ENST00000549505 LYPD5Q6UWN5 251 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms