RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 IGKV3OR2-268A0A0C4DH90 116 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 C20orf202A1L168 122 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 H3BS24 57 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 APOMO95445 188 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 UBE2D1P51668 147 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 CLPSL2Q6UWE3 100 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 CD164L2Q6UWJ8 174 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 LINC00336Q6ZUF6 198 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 LINC01561Q8N1V8 128 aa6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 GEMIN7Q9H840 131 aaKnown RBP6.56□□□□□ -1.36
SMARCD1-206ENST00000549274 TINCRA0A1B0GVN0 87 aa6.55□□□□□ -1.36
SMARCD1-206ENST00000549274 FABP4P15090 132 aa6.55□□□□□ -1.36
SMARCD1-206ENST00000549274 HIST3H2BBQ8N257 126 aa6.55□□□□□ -1.36
SMARCD1-206ENST00000549274 Q8N3U1 123 aa6.55□□□□□ -1.36
SMARCD1-206ENST00000549274 CHCHD10Q8WYQ3 142 aaPredicted RBP6.55□□□□□ -1.36
SMARCD1-206ENST00000549274 CST9LQ9H4G1 147 aa6.55□□□□□ -1.36
SMARCD1-206ENST00000549274 C5orf52A6NGY3 159 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 F8VRH5 84 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 H3BRM9 83 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 COX7A2LO14548 114 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 NUPR1O60356 82 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 PLNP26678 52 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 PET117Q6UWS5 81 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 LINC00173Q6ZV60 143 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 SPATA12Q7Z6I5 190 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 OPRPNQ99935 248 aaPredicted RBP6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 KRTAP1-5Q9BYS1 174 aa6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 CHTOPQ9Y3Y2 248 aaKnown RBP6.54□□□□□ -1.36
SMARCD1-206ENST00000549274 XCL1P47992 114 aa6.53□□□□□ -1.36
SMARCD1-206ENST00000549274 SNRPEP62304 92 aaKnown RBP6.53□□□□□ -1.36
SMARCD1-206ENST00000549274 IGLV10-54A0A075B6I4 117 aa6.52□□□□□ -1.37
SMARCD1-206ENST00000549274 IGHV1-58A0A0C4DH39 117 aa6.52□□□□□ -1.37
SMARCD1-206ENST00000549274 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
SMARCD1-206ENST00000549274 SYS1-DBNDD2H3BUS1 97 aa6.52□□□□□ -1.37
SMARCD1-206ENST00000549274 IGLC3P0DOY3 106 aa6.52□□□□□ -1.37
SMARCD1-206ENST00000549274 LINC00242Q5T6M2 205 aa6.52□□□□□ -1.37
SMARCD1-206ENST00000549274 FAM104AQ969W3 186 aa6.52□□□□□ -1.37
SMARCD1-206ENST00000549274 KRTAP9-2Q9BYQ4 174 aa6.52□□□□□ -1.37
SMARCD1-206ENST00000549274 A0A087WZ39 114 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 IGHV3OR16-9A0A0B4J2B5 98 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 F8WDY8 70 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 DPM2O94777 84 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 KRTDAPP60985 99 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 HERVK_113P61574 105 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 FOXI1Q12951 378 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 Q6ZRN7 208 aaPredicted RBP6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 LINC00469Q8N7U9 141 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 OR10D4PQ8NGN7 298 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 HIST1H2BLQ99880 126 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 CHAC1Q9BUX1 264 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 PKIGQ9Y2B9 76 aa6.51□□□□□ -1.37
SMARCD1-206ENST00000549274 FRAS1Q86XX4 4008 aa6.5□□□□□ -1.37
SMARCD1-206ENST00000549274 IGLV5-45A0A087WSX0 123 aa6.5□□□□□ -1.37
SMARCD1-206ENST00000549274 GAGE10A6NGK3 116 aa6.5□□□□□ -1.37
SMARCD1-206ENST00000549274 H0Y8G0 127 aa6.5□□□□□ -1.37
SMARCD1-206ENST00000549274 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
SMARCD1-206ENST00000549274 SFTA2Q6UW10 78 aa6.5□□□□□ -1.37
SMARCD1-206ENST00000549274 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
SMARCD1-206ENST00000549274 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
SMARCD1-206ENST00000549274 KRTAP9-6A0A140TA67 174 aa6.49□□□□□ -1.37
SMARCD1-206ENST00000549274 IGKCP01834 107 aa6.49□□□□□ -1.37
SMARCD1-206ENST00000549274 PRSS2P07478 247 aa6.49□□□□□ -1.37
SMARCD1-206ENST00000549274 C3orf79P0CE67 100 aa6.49□□□□□ -1.37
SMARCD1-206ENST00000549274 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
SMARCD1-206ENST00000549274 LINC01545Q5VT33 79 aa6.49□□□□□ -1.37
SMARCD1-206ENST00000549274 MRPL35Q9NZE8 188 aaKnown RBP6.49□□□□□ -1.37
SMARCD1-206ENST00000549274 IGLV4-69A0A075B6H9 119 aa6.48□□□□□ -1.37
SMARCD1-206ENST00000549274 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.48□□□□□ -1.37
SMARCD1-206ENST00000549274 C11orf86A6NJI1 115 aa6.48□□□□□ -1.37
SMARCD1-206ENST00000549274 CXCL5P42830 114 aa6.48□□□□□ -1.37
SMARCD1-206ENST00000549274 ZC2HC1BQ5TFG8 222 aa6.48□□□□□ -1.37
SMARCD1-206ENST00000549274 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
SMARCD1-206ENST00000549274 DNAH2Q9P225 4427 aa6.47□□□□□ -1.37
SMARCD1-206ENST00000549274 IGHV3-64A0A075B6Q5 118 aa6.47□□□□□ -1.37
SMARCD1-206ENST00000549274 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
SMARCD1-206ENST00000549274 USP17L23D6RBM5 183 aa6.47□□□□□ -1.37
SMARCD1-206ENST00000549274 ZNF22P17026 224 aaPredicted RBP6.47□□□□□ -1.37
SMARCD1-206ENST00000549274 C5orf38Q86SI9 138 aa6.47□□□□□ -1.37
SMARCD1-206ENST00000549274 C2orf48Q96LS8 159 aa6.47□□□□□ -1.37
SMARCD1-206ENST00000549274 CDKN2A-AS1Q9UH64 79 aa6.47□□□□□ -1.37
SMARCD1-206ENST00000549274 A0A087WTM6 91 aa6.46□□□□□ -1.38
SMARCD1-206ENST00000549274 HSBP1L1C9JCN9 74 aa6.46□□□□□ -1.38
SMARCD1-206ENST00000549274 RTL8CO15255 209 aa6.46□□□□□ -1.38
SMARCD1-206ENST00000549274 COX6A2Q02221 97 aa6.46□□□□□ -1.38
SMARCD1-206ENST00000549274 Q8IZM0 81 aa6.46□□□□□ -1.38
SMARCD1-206ENST00000549274 ORAOV1Q8WV07 137 aa6.46□□□□□ -1.38
SMARCD1-206ENST00000549274 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.38
SMARCD1-206ENST00000549274 DNAH10Q8IVF4 4471 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 hDV102S1A0JD36 115 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 LRCOL1A6NCL2 159 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 FAM229AH3BQW9 127 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 SPAG11BQ08648 103 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 Q8N814 137 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 PLEKHB2Q96CS7 222 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 RYR2Q92736 4967 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 DNAH17Q9UFH2 4485 aa6.45□□□□□ -1.38
SMARCD1-206ENST00000549274 SMIM1B2RUZ4 78 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms