RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 KIF25-AS1Q9Y6Z4 181 aa5.39□□□□□ -1.55
TROAP-208ENST00000548817 M0QY20 66 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 NTF3P20783 257 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 CIRBPQ14011 172 aaKnown RBP5.38□□□□□ -1.55
TROAP-208ENST00000548817 COTL1Q14019 142 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 KIAA1644Q3SXP7 199 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 SUMO4Q6EEV6 95 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 RNASEKQ6P5S7 137 aaKnown RBP5.38□□□□□ -1.55
TROAP-208ENST00000548817 C20orf203Q8NBC4 194 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 GTSF1Q8WW33 167 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 PGLYRP4Q96LB8 373 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 TMEM191AQ9H0A3 160 aa5.38□□□□□ -1.55
TROAP-208ENST00000548817 IGKV3OR2-268A0A0C4DH90 116 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 GAGE12HA6NDE8 117 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 F2Z2F3 143 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 NUPR1O60356 82 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 LINC00614P0C842 121 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 CHTF8P0CG12 524 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 SPATA45Q537H7 98 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 COL5A1-AS1Q5SY13 56 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 AMMECR1LQ6DCA0 310 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 GATD1Q8NB37 220 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 MAP1LC3CQ9BXW4 147 aa5.37□□□□□ -1.55
TROAP-208ENST00000548817 IGLV4-60A0A075B6I1 120 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 IGKV2-24A0A0C4DH68 120 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 A0A0J9YXV3 536 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 LEPROTL1O95214 131 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 C3orf79P0CE67 100 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 COX6A2Q02221 97 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 PET117Q6UWS5 81 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 FA2HQ7L5A8 372 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 SMIM15Q7Z3B0 74 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 SPACA4Q8TDM5 124 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 PMCHL2Q9BQD1 86 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 PLAC8Q9NZF1 115 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 PKIGQ9Y2B9 76 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
TROAP-208ENST00000548817 TCAPO15273 167 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 PPBPP02775 128 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 IGLC6P0CF74 106 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 LINC00310P59036 64 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 KRTAP10-8P60410 259 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 ODF1Q14990 250 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 PRSS3P2Q8NHM4 247 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 ST20Q9HBF5 79 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 LAMTOR2Q9Y2Q5 125 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
TROAP-208ENST00000548817 SLPIP03973 132 aa5.34□□□□□ -1.55
TROAP-208ENST00000548817 TWIST1Q15672 202 aa5.34□□□□□ -1.55
TROAP-208ENST00000548817 HIGD2BQ4VC39 106 aa5.34□□□□□ -1.55
TROAP-208ENST00000548817 REG3GQ6UW15 175 aa5.34□□□□□ -1.55
TROAP-208ENST00000548817 LYZL1Q6UWQ5 148 aa5.34□□□□□ -1.55
TROAP-208ENST00000548817 Q6ZN92 141 aa5.34□□□□□ -1.55
TROAP-208ENST00000548817 STPG4Q8N801 248 aa5.34□□□□□ -1.55
TROAP-208ENST00000548817 CHCHD10Q8WYQ3 142 aaPredicted RBP5.34□□□□□ -1.55
TROAP-208ENST00000548817 LINC00474Q9P2X8 69 aa5.34□□□□□ -1.55
TROAP-208ENST00000548817 A0A1B0GV90 55 aa5.33□□□□□ -1.56
TROAP-208ENST00000548817 IGLC3P0DOY3 106 aa5.33□□□□□ -1.56
TROAP-208ENST00000548817 ORMDL3Q8N138 153 aa5.33□□□□□ -1.56
TROAP-208ENST00000548817 FAM19A2Q8N3H0 131 aa5.33□□□□□ -1.56
TROAP-208ENST00000548817 C15orf56Q8N910 161 aa5.33□□□□□ -1.56
TROAP-208ENST00000548817 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
TROAP-208ENST00000548817 SNHG12Q9BXW3 62 aa5.33□□□□□ -1.56
TROAP-208ENST00000548817 SYS1-DBNDD2H3BUS1 97 aa5.32□□□□□ -1.56
TROAP-208ENST00000548817 H7C423 109 aa5.32□□□□□ -1.56
TROAP-208ENST00000548817 NCR2O95944 276 aa5.32□□□□□ -1.56
TROAP-208ENST00000548817 CTRLP40313 264 aa5.32□□□□□ -1.56
TROAP-208ENST00000548817 PRR3P79522 188 aaKnown RBP5.32□□□□□ -1.56
TROAP-208ENST00000548817 FAM104BQ5XKR9 115 aa5.31□□□□□ -1.56
TROAP-208ENST00000548817 SLC25A34Q6PIV7 304 aa5.31□□□□□ -1.56
TROAP-208ENST00000548817 SPINK6Q6UWN8 80 aa5.31□□□□□ -1.56
TROAP-208ENST00000548817 PRELID3AQ96N28 172 aa5.31□□□□□ -1.56
TROAP-208ENST00000548817 NXT2Q9NPJ8 142 aaKnown RBP5.31□□□□□ -1.56
TROAP-208ENST00000548817 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
TROAP-208ENST00000548817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.3□□□□□ -1.56
TROAP-208ENST00000548817 GVQW2A0A096LPI5 108 aaPredicted RBP5.3□□□□□ -1.56
TROAP-208ENST00000548817 IGHV1-58A0A0C4DH39 117 aa5.3□□□□□ -1.56
TROAP-208ENST00000548817 IGKV2-29A2NJV5 120 aaPredicted RBP5.3□□□□□ -1.56
TROAP-208ENST00000548817 ZNF561-AS1K7EIQ3 104 aa5.3□□□□□ -1.56
TROAP-208ENST00000548817 FGF6P10767 208 aa5.3□□□□□ -1.56
TROAP-208ENST00000548817 ZNF25P17030 456 aaPredicted RBP5.3□□□□□ -1.56
TROAP-208ENST00000548817 CKS2P33552 79 aa5.3□□□□□ -1.56
TROAP-208ENST00000548817 XCL1P47992 114 aa5.3□□□□□ -1.56
TROAP-208ENST00000548817 SS18Q15532 418 aa5.3□□□□□ -1.56
TROAP-208ENST00000548817 MAP1LC3AQ9H492 121 aa5.3□□□□□ -1.56
TROAP-208ENST00000548817 A0A096LNI7 61 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 TRAV26-2A0A0B4J265 109 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 SDHAF1A6NFY7 115 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 I3L3M4 83 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 PPP1R17O96001 155 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 HBDP02042 147 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 G0S2P27469 103 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 BATFQ16520 125 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 Q6ZRP5 223 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 OR5A1Q8NGJ0 315 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 CARD19Q96LW7 228 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 CNFNQ9BYD5 112 aa5.29□□□□□ -1.56
TROAP-208ENST00000548817 LINC01549A6NIU2 74 aa5.28□□□□□ -1.56
TROAP-208ENST00000548817 CCL25O15444 150 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms