RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 CCL24O00175 119 aa6.96□□□□□ -1.29
SMARCD1-205ENST00000548573 DEFB113Q30KQ7 82 aa6.96□□□□□ -1.29
SMARCD1-205ENST00000548573 MAP1AP78559 2803 aaPredicted RBP6.96□□□□□ -1.3
SMARCD1-205ENST00000548573 PIEZO1Q92508 2521 aa6.96□□□□□ -1.3
SMARCD1-205ENST00000548573 TRGV2A0A075B6R0 118 aa6.96□□□□□ -1.3
SMARCD1-205ENST00000548573 IGHV3OR16-9A0A0B4J2B5 98 aa6.96□□□□□ -1.3
SMARCD1-205ENST00000548573 IBA57-AS1B1ANH7 110 aa6.96□□□□□ -1.3
SMARCD1-205ENST00000548573 H0YGX0 51 aa6.96□□□□□ -1.3
SMARCD1-205ENST00000548573 GIG44P09565 113 aaPredicted RBP6.96□□□□□ -1.3
SMARCD1-205ENST00000548573 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
SMARCD1-205ENST00000548573 C5orf38Q86SI9 138 aa6.95□□□□□ -1.3
SMARCD1-205ENST00000548573 SMIM11BQ8TCY0 68 aa6.95□□□□□ -1.3
SMARCD1-205ENST00000548573 FAM110AQ9BQ89 295 aa6.95□□□□□ -1.3
SMARCD1-205ENST00000548573 Q9HAA7 133 aa6.95□□□□□ -1.3
SMARCD1-205ENST00000548573 TRBV6-8A0A0A6YYG3 113 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 LOC100131303A0A0U1RQF7 123 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 DNAL4O96015 105 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 LINC00158P58513 81 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 TOMM7Q9P0U1 55 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 A0A087WZ39 114 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 TRGV4A0A0C4DH28 118 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 CCL18P55774 89 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 GAGE2AQ6NT46 116 aa6.94□□□□□ -1.3
SMARCD1-205ENST00000548573 MXRA5Q9NR99 2828 aa6.93□□□□□ -1.3
SMARCD1-205ENST00000548573 IGLV4-60A0A075B6I1 120 aa6.93□□□□□ -1.3
SMARCD1-205ENST00000548573 A0A1W2PRX2 142 aa6.93□□□□□ -1.3
SMARCD1-205ENST00000548573 KRTAP10-9P60411 292 aa6.93□□□□□ -1.3
SMARCD1-205ENST00000548573 PKD1L2Q7Z442 2459 aa6.93□□□□□ -1.3
SMARCD1-205ENST00000548573 CFAP46Q8IYW2 2715 aa6.93□□□□□ -1.3
SMARCD1-205ENST00000548573 ANKRD17O75179 2603 aaKnown RBP6.93□□□□□ -1.3
SMARCD1-205ENST00000548573 A0A087WYN8 130 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 CSNK1G2-AS1Q8NCQ2 148 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 OBSCN-AS1Q96MR7 158 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 USP9XQ93008 2570 aaPredicted RBP6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 FBN2P35556 2912 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 DNAJC9-AS1A6NH13 148 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 FHL2Q14192 279 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 C11orf44Q8N8P7 122 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 ZANQ9Y493 2812 aa6.92□□□□□ -1.3
SMARCD1-205ENST00000548573 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
SMARCD1-205ENST00000548573 UQCRQO14949 82 aa6.91□□□□□ -1.3
SMARCD1-205ENST00000548573 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
SMARCD1-205ENST00000548573 C19orf73Q9NVV2 129 aa6.91□□□□□ -1.3
SMARCD1-205ENST00000548573 FLNCQ14315 2725 aa6.91□□□□□ -1.3
SMARCD1-205ENST00000548573 LY6G6DO95868 133 aa6.9□□□□□ -1.3
SMARCD1-205ENST00000548573 RPL35AP18077 110 aaKnown RBP6.9□□□□□ -1.3
SMARCD1-205ENST00000548573 HIST1H4AP62805 103 aaKnown RBP6.9□□□□□ -1.3
SMARCD1-205ENST00000548573 KRTAP1-3Q8IUG1 177 aa6.9□□□□□ -1.3
SMARCD1-205ENST00000548573 LINC00526Q96FQ7 95 aa6.9□□□□□ -1.3
SMARCD1-205ENST00000548573 KLK5Q9Y337 293 aaPredicted RBP6.9□□□□□ -1.3
SMARCD1-205ENST00000548573 USP9YO00507 2555 aaPredicted RBP6.9□□□□□ -1.3
SMARCD1-205ENST00000548573 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
SMARCD1-205ENST00000548573 IGLV1-51P01701 117 aa6.89□□□□□ -1.31
SMARCD1-205ENST00000548573 PFN2P35080 140 aa6.89□□□□□ -1.31
SMARCD1-205ENST00000548573 C9orf153Q5TBE3 101 aa6.89□□□□□ -1.31
SMARCD1-205ENST00000548573 PAX4O43316 350 aa6.89□□□□□ -1.31
SMARCD1-205ENST00000548573 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
SMARCD1-205ENST00000548573 WFDC10AQ9H1F0 79 aa6.89□□□□□ -1.31
SMARCD1-205ENST00000548573 LECT2O14960 151 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 C6orf226Q5I0X4 101 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 C14orf132Q9NPU4 83 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 UTP20O75691 2785 aaKnown RBP6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 ATOX1O00244 68 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 COX7CP15954 63 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 Q6JHZ5 121 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 LINC01561Q8N1V8 128 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 OR13C6PQ8NH95 151 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 ESM1Q9NQ30 184 aa6.88□□□□□ -1.31
SMARCD1-205ENST00000548573 A0A1B0GUV1 79 aa6.87□□□□□ -1.31
SMARCD1-205ENST00000548573 PLA2G2AP14555 144 aa6.87□□□□□ -1.31
SMARCD1-205ENST00000548573 Q8IZM0 81 aa6.87□□□□□ -1.31
SMARCD1-205ENST00000548573 KIR2DL5BQ8NHK3 375 aa6.87□□□□□ -1.31
SMARCD1-205ENST00000548573 A0A1B0GX51 115 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 SS18Q15532 418 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 C16orf95Q9H693 158 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 IGSF10Q6WRI0 2623 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 LINC00612Q8N6U2 182 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 C3orf56Q8N813 242 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 LINC01006Q8NI28 216 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 LINC00167Q96N53 147 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 LINC00846Q9NV44 126 aa6.86□□□□□ -1.31
SMARCD1-205ENST00000548573 PRB1P04280 392 aa6.85□□□□□ -1.31
SMARCD1-205ENST00000548573 CRYGAP11844 174 aa6.85□□□□□ -1.31
SMARCD1-205ENST00000548573 XCL1P47992 114 aa6.85□□□□□ -1.31
SMARCD1-205ENST00000548573 RPL18AQ02543 176 aaKnown RBP6.85□□□□□ -1.31
SMARCD1-205ENST00000548573 BBC3Q96PG8 261 aaPredicted RBP6.85□□□□□ -1.31
SMARCD1-205ENST00000548573 TEX15Q9BXT5 2789 aa6.84□□□□□ -1.31
SMARCD1-205ENST00000548573 AKAP9Q99996 3911 aa6.84□□□□□ -1.31
SMARCD1-205ENST00000548573 NCR3O14931 201 aa6.84□□□□□ -1.31
SMARCD1-205ENST00000548573 NDUFC2O95298 119 aa6.84□□□□□ -1.31
SMARCD1-205ENST00000548573 CHD6Q8TD26 2715 aa6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 POLQO75417 2590 aa6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 JMJD7-PLA2G4BH0Y9G9 81 aa6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 SLPIP03973 132 aa6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 CCKP06307 115 aa6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 RNASE1P07998 156 aaKnown RBP6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 GYPEP15421 78 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms