RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 PDZD11Q5EBL8 140 aa7.43□□□□□ -1.22
CALCOCO1-208ENST00000547988 ZC2HC1BQ5TFG8 222 aa7.43□□□□□ -1.22
CALCOCO1-208ENST00000547988 FAM19A3Q7Z5A8 133 aa7.43□□□□□ -1.22
CALCOCO1-208ENST00000547988 SERF1AO75920 110 aa7.42□□□□□ -1.22
CALCOCO1-208ENST00000547988 APOMO95445 188 aa7.42□□□□□ -1.22
CALCOCO1-208ENST00000547988 MALP21145 153 aa7.42□□□□□ -1.22
CALCOCO1-208ENST00000547988 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
CALCOCO1-208ENST00000547988 PMVKQ15126 192 aa7.42□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BKO60814 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BJP06899 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BOP23527 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BBP33778 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BDP58876 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BCP62807 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HERVK_113P63121 156 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST2H2BEQ16778 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIGD2BQ4VC39 106 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 C5orf38Q86SI9 138 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BHQ93079 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BNQ99877 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 HIST1H2BMQ99879 126 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 CST9LQ9H4G1 147 aa7.41□□□□□ -1.22
CALCOCO1-208ENST00000547988 A0A087WZ39 114 aa7.4□□□□□ -1.22
CALCOCO1-208ENST00000547988 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.4□□□□□ -1.22
CALCOCO1-208ENST00000547988 LINC00310P59036 64 aa7.4□□□□□ -1.22
CALCOCO1-208ENST00000547988 COX6A2Q02221 97 aa7.4□□□□□ -1.22
CALCOCO1-208ENST00000547988 LINC01561Q8N1V8 128 aa7.4□□□□□ -1.22
CALCOCO1-208ENST00000547988 OR10D4PQ8NGN7 298 aa7.4□□□□□ -1.22
CALCOCO1-208ENST00000547988 TINCRA0A1B0GVN0 87 aa7.39□□□□□ -1.23
CALCOCO1-208ENST00000547988 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
CALCOCO1-208ENST00000547988 FAM19A2Q8N3H0 131 aa7.39□□□□□ -1.23
CALCOCO1-208ENST00000547988 C9orf163Q8N9P6 203 aa7.39□□□□□ -1.23
CALCOCO1-208ENST00000547988 GEMIN7Q9H840 131 aaKnown RBP7.39□□□□□ -1.23
CALCOCO1-208ENST00000547988 DNAH5Q8TE73 4624 aa7.39□□□□□ -1.23
CALCOCO1-208ENST00000547988 DYNC1H1Q14204 4646 aaKnown RBP7.38□□□□□ -1.23
CALCOCO1-208ENST00000547988 IGHV3-64A0A075B6Q5 118 aa7.38□□□□□ -1.23
CALCOCO1-208ENST00000547988 A0A0J9YXV3 536 aa7.38□□□□□ -1.23
CALCOCO1-208ENST00000547988 KRTAP10-1P60331 282 aa7.38□□□□□ -1.23
CALCOCO1-208ENST00000547988 IFI27L1Q96BM0 104 aa7.38□□□□□ -1.23
CALCOCO1-208ENST00000547988 IGLV5-45A0A087WSX0 123 aa7.37□□□□□ -1.23
CALCOCO1-208ENST00000547988 NUPR1O60356 82 aa7.37□□□□□ -1.23
CALCOCO1-208ENST00000547988 CDK2AP2O75956 126 aa7.37□□□□□ -1.23
CALCOCO1-208ENST00000547988 LEPROTL1O95214 131 aa7.37□□□□□ -1.23
CALCOCO1-208ENST00000547988 SLPIP03973 132 aa7.37□□□□□ -1.23
CALCOCO1-208ENST00000547988 NDUFA6P56556 154 aa7.37□□□□□ -1.23
CALCOCO1-208ENST00000547988 SPAG11BQ08648 103 aa7.37□□□□□ -1.23
CALCOCO1-208ENST00000547988 ORAOV1Q8WV07 137 aa7.37□□□□□ -1.23
CALCOCO1-208ENST00000547988 IGLV4-69A0A075B6H9 119 aa7.36□□□□□ -1.23
CALCOCO1-208ENST00000547988 TRAV12-1A0A0B4J245 112 aa7.36□□□□□ -1.23
CALCOCO1-208ENST00000547988 F8WDY8 70 aa7.36□□□□□ -1.23
CALCOCO1-208ENST00000547988 IGLC3P0DOY3 106 aa7.36□□□□□ -1.23
CALCOCO1-208ENST00000547988 LINC01620Q4KN68 170 aa7.36□□□□□ -1.23
CALCOCO1-208ENST00000547988 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
CALCOCO1-208ENST00000547988 CDKN2A-AS1Q9UH64 79 aa7.36□□□□□ -1.23
CALCOCO1-208ENST00000547988 HSPB8Q9UJY1 196 aa7.36□□□□□ -1.23
CALCOCO1-208ENST00000547988 SYCNQ0VAF6 134 aa7.35□□□□□ -1.23
CALCOCO1-208ENST00000547988 COA6Q5JTJ3 125 aaKnown RBP7.35□□□□□ -1.23
CALCOCO1-208ENST00000547988 LINC00469Q8N7U9 141 aa7.35□□□□□ -1.23
CALCOCO1-208ENST00000547988 LINC00526Q96FQ7 95 aa7.35□□□□□ -1.23
CALCOCO1-208ENST00000547988 CARD19Q96LW7 228 aa7.35□□□□□ -1.23
CALCOCO1-208ENST00000547988 PACRGQ96M98 296 aaPredicted RBP7.35□□□□□ -1.23
CALCOCO1-208ENST00000547988 CHAC1Q9BUX1 264 aa7.35□□□□□ -1.23
CALCOCO1-208ENST00000547988 LRP1BQ9NZR2 4599 aa7.34□□□□□ -1.23
CALCOCO1-208ENST00000547988 Q6ZSA8 131 aa7.34□□□□□ -1.23
CALCOCO1-208ENST00000547988 CAMK2N2Q96S95 79 aa7.34□□□□□ -1.23
CALCOCO1-208ENST00000547988 PKIGQ9Y2B9 76 aa7.34□□□□□ -1.23
CALCOCO1-208ENST00000547988 H3BRM9 83 aa7.33□□□□□ -1.24
CALCOCO1-208ENST00000547988 KIAA0087Q14695 138 aa7.33□□□□□ -1.24
CALCOCO1-208ENST00000547988 Q8IZM0 81 aa7.33□□□□□ -1.24
CALCOCO1-208ENST00000547988 CHTOPQ9Y3Y2 248 aaKnown RBP7.33□□□□□ -1.24
CALCOCO1-208ENST00000547988 BIRC6Q9NR09 4857 aa7.32□□□□□ -1.24
CALCOCO1-208ENST00000547988 SMIM1B2RUZ4 78 aa7.32□□□□□ -1.24
CALCOCO1-208ENST00000547988 F8VRH5 84 aa7.32□□□□□ -1.24
CALCOCO1-208ENST00000547988 NDUFA1O15239 70 aa7.32□□□□□ -1.24
CALCOCO1-208ENST00000547988 PRSS2P07478 247 aa7.32□□□□□ -1.24
CALCOCO1-208ENST00000547988 FABP4P15090 132 aa7.32□□□□□ -1.24
CALCOCO1-208ENST00000547988 SDIM1Q6ZPB5 146 aa7.32□□□□□ -1.24
CALCOCO1-208ENST00000547988 Q6ZRU5 148 aa7.32□□□□□ -1.24
CALCOCO1-208ENST00000547988 C11orf86A6NJI1 115 aa7.31□□□□□ -1.24
CALCOCO1-208ENST00000547988 ZNF22P17026 224 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO1-208ENST00000547988 RNF151Q2KHN1 245 aa7.31□□□□□ -1.24
CALCOCO1-208ENST00000547988 MRPL35Q9NZE8 188 aaKnown RBP7.31□□□□□ -1.24
CALCOCO1-208ENST00000547988 FAM30AQ9NZY2 134 aa7.31□□□□□ -1.24
CALCOCO1-208ENST00000547988 XGP55808 180 aa7.3□□□□□ -1.24
CALCOCO1-208ENST00000547988 ODF1Q14990 250 aa7.3□□□□□ -1.24
CALCOCO1-208ENST00000547988 C6orf226Q5I0X4 101 aa7.3□□□□□ -1.24
CALCOCO1-208ENST00000547988 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
CALCOCO1-208ENST00000547988 TOMM7Q9P0U1 55 aa7.3□□□□□ -1.24
CALCOCO1-208ENST00000547988 TRBV30A0A0K0K1B3 111 aa7.29□□□□□ -1.24
CALCOCO1-208ENST00000547988 H0Y8G0 127 aa7.29□□□□□ -1.24
CALCOCO1-208ENST00000547988 SPINK8P0C7L1 97 aa7.29□□□□□ -1.24
CALCOCO1-208ENST00000547988 CXCL5P42830 114 aa7.29□□□□□ -1.24
CALCOCO1-208ENST00000547988 CKS1BP61024 79 aa7.29□□□□□ -1.24
CALCOCO1-208ENST00000547988 CIRBPQ14011 172 aaKnown RBP7.29□□□□□ -1.24
CALCOCO1-208ENST00000547988 TMEM170BQ5T4T1 132 aa7.29□□□□□ -1.24
CALCOCO1-208ENST00000547988 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
CALCOCO1-208ENST00000547988 LOC107984640A0A0U1RRK4 108 aa7.28□□□□□ -1.24
CALCOCO1-208ENST00000547988 PLNP26678 52 aa7.28□□□□□ -1.24
CALCOCO1-208ENST00000547988 C2orf82Q6UX34 121 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms