RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 CITED1Q99966 193 aa9.34□□□□□ -0.91
BRF1-210ENST00000547374 CITED2Q99967 270 aaPredicted RBP9.34□□□□□ -0.91
BRF1-210ENST00000547374 CCL24O00175 119 aa9.34□□□□□ -0.91
BRF1-210ENST00000547374 MIR7-3HGQ8N6C7 128 aa9.33□□□□□ -0.92
BRF1-210ENST00000547374 DEFB4AO15263 64 aa9.33□□□□□ -0.92
BRF1-210ENST00000547374 BRI3O95415 125 aa9.33□□□□□ -0.92
BRF1-210ENST00000547374 ATRQ13535 2644 aa9.33□□□□□ -0.92
BRF1-210ENST00000547374 XCL1P47992 114 aa9.32□□□□□ -0.92
BRF1-210ENST00000547374 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
BRF1-210ENST00000547374 TMEM243Q9BU79 118 aa9.32□□□□□ -0.92
BRF1-210ENST00000547374 K7EQD1 137 aa9.32□□□□□ -0.92
BRF1-210ENST00000547374 CRPP02741 224 aa9.32□□□□□ -0.92
BRF1-210ENST00000547374 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
BRF1-210ENST00000547374 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
BRF1-210ENST00000547374 DAZ4Q86SG3 579 aaKnown RBP9.31□□□□□ -0.92
BRF1-210ENST00000547374 C11orf72Q8NBR9 251 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 WFDC11Q8NEX6 87 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 DAZ3Q9NR90 486 aaKnown RBP9.31□□□□□ -0.92
BRF1-210ENST00000547374 LST1O00453 97 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 SLPIP03973 132 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 SMIM20Q8N5G0 67 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 HELZ2Q9BYK8 2649 aaKnown RBP9.31□□□□□ -0.92
BRF1-210ENST00000547374 UBR5O95071 2799 aaPredicted RBP9.31□□□□□ -0.92
BRF1-210ENST00000547374 FAM236AA0A1B0GUQ0 79 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 FAM236BA0A1B0GV22 79 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 HTN3P15516 51 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 SBSPONQ8IVN8 264 aa9.31□□□□□ -0.92
BRF1-210ENST00000547374 IGLV10-54A0A075B6I4 117 aa9.3□□□□□ -0.92
BRF1-210ENST00000547374 C6orf226Q5I0X4 101 aa9.3□□□□□ -0.92
BRF1-210ENST00000547374 SMIM1B2RUZ4 78 aa9.3□□□□□ -0.92
BRF1-210ENST00000547374 SPANXDQ9BXN6 97 aa9.3□□□□□ -0.92
BRF1-210ENST00000547374 SPANXCQ9NY87 97 aa9.3□□□□□ -0.92
BRF1-210ENST00000547374 NDUFA1O15239 70 aa9.29□□□□□ -0.92
BRF1-210ENST00000547374 SND1-IT1Q9HBX3 110 aa9.29□□□□□ -0.92
BRF1-210ENST00000547374 J3QLI3 93 aa9.29□□□□□ -0.92
BRF1-210ENST00000547374 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
BRF1-210ENST00000547374 H3BT86 120 aa9.28□□□□□ -0.92
BRF1-210ENST00000547374 BBC3Q96PG8 261 aaPredicted RBP9.28□□□□□ -0.92
BRF1-210ENST00000547374 IGLV4-60A0A075B6I1 120 aa9.27□□□□□ -0.93
BRF1-210ENST00000547374 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
BRF1-210ENST00000547374 DNAJC30Q96LL9 226 aa9.27□□□□□ -0.93
BRF1-210ENST00000547374 DNAJC9-AS1A6NH13 148 aa9.26□□□□□ -0.93
BRF1-210ENST00000547374 DEFB113Q30KQ7 82 aa9.26□□□□□ -0.93
BRF1-210ENST00000547374 C14orf132Q9NPU4 83 aa9.26□□□□□ -0.93
BRF1-210ENST00000547374 NHLRC4P0CG21 123 aaPredicted RBP9.26□□□□□ -0.93
BRF1-210ENST00000547374 FAM218AQ96MZ4 157 aa9.26□□□□□ -0.93
BRF1-210ENST00000547374 COX7A2LO14548 114 aa9.26□□□□□ -0.93
BRF1-210ENST00000547374 CDC42SE2Q9NRR3 84 aa9.26□□□□□ -0.93
BRF1-210ENST00000547374 PRR3P79522 188 aaKnown RBP9.25□□□□□ -0.93
BRF1-210ENST00000547374 LECT2O14960 151 aa9.25□□□□□ -0.93
BRF1-210ENST00000547374 TIRAPP58753 221 aa9.25□□□□□ -0.93
BRF1-210ENST00000547374 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
BRF1-210ENST00000547374 F8P00451 2351 aa9.24□□□□□ -0.93
BRF1-210ENST00000547374 LINC00526Q96FQ7 95 aa9.23□□□□□ -0.93
BRF1-210ENST00000547374 CR1P17927 2039 aa9.23□□□□□ -0.93
BRF1-210ENST00000547374 UNC79Q9P2D8 2635 aa9.23□□□□□ -0.93
BRF1-210ENST00000547374 PF4P02776 101 aa9.22□□□□□ -0.93
BRF1-210ENST00000547374 NBPF19A0A087WUL8 3843 aa9.22□□□□□ -0.93
BRF1-210ENST00000547374 SDIM1Q6ZPB5 146 aa9.22□□□□□ -0.93
BRF1-210ENST00000547374 EDA2RQ9HAV5 297 aa9.22□□□□□ -0.93
BRF1-210ENST00000547374 GYPEP15421 78 aa9.22□□□□□ -0.93
BRF1-210ENST00000547374 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
BRF1-210ENST00000547374 NCR3O14931 201 aa9.21□□□□□ -0.93
BRF1-210ENST00000547374 HIST1H4AP62805 103 aaKnown RBP9.21□□□□□ -0.93
BRF1-210ENST00000547374 LINC00337Q8N6G1 96 aa9.21□□□□□ -0.93
BRF1-210ENST00000547374 TEP1Q99973 2627 aaKnown RBP9.21□□□□□ -0.93
BRF1-210ENST00000547374 ZNF469Q96JG9 3925 aaPredicted RBP9.21□□□□□ -0.94
BRF1-210ENST00000547374 A0A087WYN8 130 aa9.21□□□□□ -0.94
BRF1-210ENST00000547374 BEAN1Q3B7T3 259 aa9.2□□□□□ -0.94
BRF1-210ENST00000547374 C9orf153Q5TBE3 101 aa9.2□□□□□ -0.94
BRF1-210ENST00000547374 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
BRF1-210ENST00000547374 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
BRF1-210ENST00000547374 A0A096LNT2 108 aa9.19□□□□□ -0.94
BRF1-210ENST00000547374 TRAV13-2A0A0B4J235 113 aa9.18□□□□□ -0.94
BRF1-210ENST00000547374 CCL18P55774 89 aa9.18□□□□□ -0.94
BRF1-210ENST00000547374 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
BRF1-210ENST00000547374 MALP21145 153 aa9.18□□□□□ -0.94
BRF1-210ENST00000547374 C9orf116Q5BN46 136 aaPredicted RBP9.18□□□□□ -0.94
BRF1-210ENST00000547374 RNF152Q8N8N0 203 aa9.18□□□□□ -0.94
BRF1-210ENST00000547374 SMR3AQ99954 134 aa9.18□□□□□ -0.94
BRF1-210ENST00000547374 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
BRF1-210ENST00000547374 SHISA2Q6UWI4 295 aa9.17□□□□□ -0.94
BRF1-210ENST00000547374 TIMM17BO60830 172 aa9.17□□□□□ -0.94
BRF1-210ENST00000547374 Q8N3U1 123 aa9.17□□□□□ -0.94
BRF1-210ENST00000547374 SMCR5Q8TEV8 140 aa9.17□□□□□ -0.94
BRF1-210ENST00000547374 KLK5Q9Y337 293 aaPredicted RBP9.17□□□□□ -0.94
BRF1-210ENST00000547374 VWFP04275 2813 aa9.17□□□□□ -0.94
BRF1-210ENST00000547374 ANGP03950 147 aaKnown RBP9.17□□□□□ -0.94
BRF1-210ENST00000547374 C9orf129Q5T035 196 aaKnown RBP9.17□□□□□ -0.94
BRF1-210ENST00000547374 A0A087WVE0 104 aa9.16□□□□□ -0.94
BRF1-210ENST00000547374 HERV-K104P63124 156 aa9.16□□□□□ -0.94
BRF1-210ENST00000547374 LINC01006Q8NI28 216 aa9.16□□□□□ -0.94
BRF1-210ENST00000547374 MRPL23Q16540 153 aaKnown RBP9.16□□□□□ -0.94
BRF1-210ENST00000547374 TRBV6-8A0A0A6YYG3 113 aa9.16□□□□□ -0.94
BRF1-210ENST00000547374 C16orf74Q96GX8 76 aa9.15□□□□□ -0.94
BRF1-210ENST00000547374 F5H768 121 aa9.15□□□□□ -0.94
BRF1-210ENST00000547374 WFDC9Q8NEX5 89 aa9.15□□□□□ -0.94
BRF1-210ENST00000547374 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
BRF1-210ENST00000547374 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms