RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 Q8N1X5 172 aa16.47■□□□□ 0.23
NKX2-1-205ENST00000546983 DYNC1H1Q14204 4646 aaKnown RBP16.47■□□□□ 0.23
NKX2-1-205ENST00000546983 UBE2D1P51668 147 aa16.46■□□□□ 0.23
NKX2-1-205ENST00000546983 FAM19A3Q7Z5A8 133 aa16.45■□□□□ 0.22
NKX2-1-205ENST00000546983 C5orf38Q86SI9 138 aa16.45■□□□□ 0.22
NKX2-1-205ENST00000546983 C2orf48Q96LS8 159 aa16.45■□□□□ 0.22
NKX2-1-205ENST00000546983 HERVK_113P63121 156 aa16.44■□□□□ 0.22
NKX2-1-205ENST00000546983 LINC00242Q5T6M2 205 aa16.44■□□□□ 0.22
NKX2-1-205ENST00000546983 A0A087WZ39 114 aa16.43■□□□□ 0.22
NKX2-1-205ENST00000546983 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.43■□□□□ 0.22
NKX2-1-205ENST00000546983 LINC01620Q4KN68 170 aa16.43■□□□□ 0.22
NKX2-1-205ENST00000546983 SDIM1Q6ZPB5 146 aa16.43■□□□□ 0.22
NKX2-1-205ENST00000546983 CHCHD1Q96BP2 118 aaKnown RBP16.43■□□□□ 0.22
NKX2-1-205ENST00000546983 CHAC1Q9BUX1 264 aa16.43■□□□□ 0.22
NKX2-1-205ENST00000546983 HBDP02042 147 aa16.42■□□□□ 0.22
NKX2-1-205ENST00000546983 CARD19Q96LW7 228 aa16.42■□□□□ 0.22
NKX2-1-205ENST00000546983 FAM30AQ9NZY2 134 aa16.42■□□□□ 0.22
NKX2-1-205ENST00000546983 SYCNQ0VAF6 134 aa16.41■□□□□ 0.22
NKX2-1-205ENST00000546983 LINC00173Q6ZV60 143 aa16.41■□□□□ 0.22
NKX2-1-205ENST00000546983 LINC00474Q9P2X8 69 aa16.41■□□□□ 0.22
NKX2-1-205ENST00000546983 LRP1BQ9NZR2 4599 aa16.4■□□□□ 0.22
NKX2-1-205ENST00000546983 SLPIP03973 132 aa16.4■□□□□ 0.22
NKX2-1-205ENST00000546983 GEMIN7Q9H840 131 aaKnown RBP16.4■□□□□ 0.22
NKX2-1-205ENST00000546983 IGLV4-69A0A075B6H9 119 aa16.39■□□□□ 0.21
NKX2-1-205ENST00000546983 FAM229AH3BQW9 127 aa16.39■□□□□ 0.21
NKX2-1-205ENST00000546983 KIAA1109Q2LD37 5005 aa16.39■□□□□ 0.21
NKX2-1-205ENST00000546983 ATP5LO75964 103 aa16.38■□□□□ 0.21
NKX2-1-205ENST00000546983 SPAG11BQ08648 103 aa16.38■□□□□ 0.21
NKX2-1-205ENST00000546983 PMVKQ15126 192 aa16.38■□□□□ 0.21
NKX2-1-205ENST00000546983 ORAOV1Q8WV07 137 aa16.38■□□□□ 0.21
NKX2-1-205ENST00000546983 CAMK2N2Q96S95 79 aa16.38■□□□□ 0.21
NKX2-1-205ENST00000546983 TRGC2P03986 189 aa16.36■□□□□ 0.21
NKX2-1-205ENST00000546983 EPM2AB3EWF7 344 aa16.35■□□□□ 0.21
NKX2-1-205ENST00000546983 CIRBPQ14011 172 aaKnown RBP16.35■□□□□ 0.21
NKX2-1-205ENST00000546983 RNF151Q2KHN1 245 aa16.35■□□□□ 0.21
NKX2-1-205ENST00000546983 TINCRA0A1B0GVN0 87 aa16.34■□□□□ 0.21
NKX2-1-205ENST00000546983 COLCA2A8K830 154 aa16.34■□□□□ 0.21
NKX2-1-205ENST00000546983 SCXQ7RTU7 201 aa16.34■□□□□ 0.21
NKX2-1-205ENST00000546983 BAGE3Q86Y29 109 aa16.34■□□□□ 0.21
NKX2-1-205ENST00000546983 PACRGQ96M98 296 aaPredicted RBP16.34■□□□□ 0.21
NKX2-1-205ENST00000546983 CST9LQ9H4G1 147 aa16.34■□□□□ 0.21
NKX2-1-205ENST00000546983 DNAH5Q8TE73 4624 aa16.34■□□□□ 0.21
NKX2-1-205ENST00000546983 NDUFA1O15239 70 aa16.33■□□□□ 0.2
NKX2-1-205ENST00000546983 DPH3Q96FX2 82 aa16.33■□□□□ 0.2
NKX2-1-205ENST00000546983 URB1-AS1Q96HZ7 61 aa16.33■□□□□ 0.2
NKX2-1-205ENST00000546983 COX6A2Q02221 97 aa16.32■□□□□ 0.2
NKX2-1-205ENST00000546983 CIRBP-AS1Q8TBR5 109 aa16.32■□□□□ 0.2
NKX2-1-205ENST00000546983 PRSS2P07478 247 aa16.31■□□□□ 0.2
NKX2-1-205ENST00000546983 PDZD11Q5EBL8 140 aa16.31■□□□□ 0.2
NKX2-1-205ENST00000546983 MRPL35Q9NZE8 188 aaKnown RBP16.31■□□□□ 0.2
NKX2-1-205ENST00000546983 A0A096LNJ9 63 aa16.3■□□□□ 0.2
NKX2-1-205ENST00000546983 LOC107984640A0A0U1RRK4 108 aa16.3■□□□□ 0.2
NKX2-1-205ENST00000546983 HSBP1O75506 76 aa16.3■□□□□ 0.2
NKX2-1-205ENST00000546983 ZC2HC1BQ5TFG8 222 aa16.3■□□□□ 0.2
NKX2-1-205ENST00000546983 LINC00526Q96FQ7 95 aa16.3■□□□□ 0.2
NKX2-1-205ENST00000546983 PLA2G1BP04054 148 aaKnown RBP16.29■□□□□ 0.2
NKX2-1-205ENST00000546983 HERC2O95714 4834 aa16.28■□□□□ 0.2
NKX2-1-205ENST00000546983 Q6ZRU5 148 aa16.28■□□□□ 0.2
NKX2-1-205ENST00000546983 LINC00469Q8N7U9 141 aa16.28■□□□□ 0.2
NKX2-1-205ENST00000546983 A0A0J9YXV3 536 aa16.27■□□□□ 0.2
NKX2-1-205ENST00000546983 H3BRM9 83 aa16.27■□□□□ 0.2
NKX2-1-205ENST00000546983 Q8IZM0 81 aa16.27■□□□□ 0.2
NKX2-1-205ENST00000546983 SPACA4Q8TDM5 124 aa16.27■□□□□ 0.2
NKX2-1-205ENST00000546983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.27■□□□□ 0.2
NKX2-1-205ENST00000546983 IGLV5-45A0A087WSX0 123 aa16.26■□□□□ 0.19
NKX2-1-205ENST00000546983 SMR3BP02814 79 aaPredicted RBP16.26■□□□□ 0.19
NKX2-1-205ENST00000546983 Q5VSD8 79 aa16.26■□□□□ 0.19
NKX2-1-205ENST00000546983 CDKN2A-AS1Q9UH64 79 aa16.26■□□□□ 0.19
NKX2-1-205ENST00000546983 TRBV30A0A0K0K1B3 111 aa16.25■□□□□ 0.19
NKX2-1-205ENST00000546983 CXCL5P42830 114 aa16.25■□□□□ 0.19
NKX2-1-205ENST00000546983 NDUFA6P56556 154 aa16.25■□□□□ 0.19
NKX2-1-205ENST00000546983 PMCHL1Q16048 86 aa16.25■□□□□ 0.19
NKX2-1-205ENST00000546983 C6orf226Q5I0X4 101 aa16.25■□□□□ 0.19
NKX2-1-205ENST00000546983 RYR1P21817 5038 aa16.25■□□□□ 0.19
NKX2-1-205ENST00000546983 CKS1BP61024 79 aa16.24■□□□□ 0.19
NKX2-1-205ENST00000546983 HAMPP81172 84 aa16.24■□□□□ 0.19
NKX2-1-205ENST00000546983 S100A1P23297 94 aa16.23■□□□□ 0.19
NKX2-1-205ENST00000546983 KIAA0087Q14695 138 aa16.23■□□□□ 0.19
NKX2-1-205ENST00000546983 LINC00528Q8N1L1 170 aa16.23■□□□□ 0.19
NKX2-1-205ENST00000546983 IGLC3P0DOY3 106 aa16.22■□□□□ 0.19
NKX2-1-205ENST00000546983 MAJINQ3KP22 176 aa16.21■□□□□ 0.19
NKX2-1-205ENST00000546983 IFI27L1Q96BM0 104 aa16.21■□□□□ 0.19
NKX2-1-205ENST00000546983 PLAC8Q9NZF1 115 aa16.21■□□□□ 0.19
NKX2-1-205ENST00000546983 APOBP04114 4563 aaKnown RBP16.21■□□□□ 0.18
NKX2-1-205ENST00000546983 HSPG2P98160 4391 aa16.2■□□□□ 0.18
NKX2-1-205ENST00000546983 A0A087WYN8 130 aa16.2■□□□□ 0.18
NKX2-1-205ENST00000546983 TRAV12-1A0A0B4J245 112 aa16.2■□□□□ 0.18
NKX2-1-205ENST00000546983 IGKV2-24A0A0C4DH68 120 aa16.2■□□□□ 0.18
NKX2-1-205ENST00000546983 TLX1NBP0CAT3 122 aa16.2■□□□□ 0.18
NKX2-1-205ENST00000546983 PTTG1IPP53801 180 aa16.2■□□□□ 0.18
NKX2-1-205ENST00000546983 TOMM7Q9P0U1 55 aa16.2■□□□□ 0.18
NKX2-1-205ENST00000546983 A0A096LNI7 61 aa16.19■□□□□ 0.18
NKX2-1-205ENST00000546983 SMIM1B2RUZ4 78 aa16.17■□□□□ 0.18
NKX2-1-205ENST00000546983 SERF1AO75920 110 aa16.17■□□□□ 0.18
NKX2-1-205ENST00000546983 CHTF8P0CG12 524 aa16.17■□□□□ 0.18
NKX2-1-205ENST00000546983 UNQ6190/PRO20217Q6UXQ8 127 aa16.17■□□□□ 0.18
NKX2-1-205ENST00000546983 HSPB8Q9UJY1 196 aa16.17■□□□□ 0.18
NKX2-1-205ENST00000546983 PANO1I0J062 215 aa16.16■□□□□ 0.18
NKX2-1-205ENST00000546983 SCO1O75880 301 aa16.16■□□□□ 0.18
NKX2-1-205ENST00000546983 LEPROTL1O95214 131 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms