RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 COL12A1Q99715 3063 aa9.84□□□□□ -0.83
SLC38A1-204ENST00000546893 SPTAN1Q13813 2472 aaKnown RBP9.83□□□□□ -0.84
SLC38A1-204ENST00000546893 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
SLC38A1-204ENST00000546893 DEFB136Q30KP8 78 aa9.83□□□□□ -0.84
SLC38A1-204ENST00000546893 CDKN2A-AS1Q9UH64 79 aa9.83□□□□□ -0.84
SLC38A1-204ENST00000546893 K7EQD1 137 aa9.82□□□□□ -0.84
SLC38A1-204ENST00000546893 NDUFC2-KCTD14E9PQ53 114 aa9.82□□□□□ -0.84
SLC38A1-204ENST00000546893 MYO18BQ8IUG5 2567 aa9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 KMT2BQ9UMN6 2715 aaPredicted RBP9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 UBR5O95071 2799 aaPredicted RBP9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 PRIMA1Q86XR5 153 aa9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 AKAP6Q13023 2319 aa9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 COX7A2LO14548 114 aa9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 PF4P02776 101 aa9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 BAALC-AS2P0C853 105 aa9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 KHDC1LQ5JSQ8 128 aa9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 C18orf65Q6ZTR6 163 aa9.81□□□□□ -0.84
SLC38A1-204ENST00000546893 IGHV3OR16-12A0A075B7B8 117 aa9.8□□□□□ -0.84
SLC38A1-204ENST00000546893 NDUFC2O95298 119 aa9.8□□□□□ -0.84
SLC38A1-204ENST00000546893 LINC00242Q5T6M2 205 aa9.8□□□□□ -0.84
SLC38A1-204ENST00000546893 PLA2G2AP14555 144 aa9.79□□□□□ -0.84
SLC38A1-204ENST00000546893 ODF3L2Q3SX64 289 aa9.79□□□□□ -0.84
SLC38A1-204ENST00000546893 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
SLC38A1-204ENST00000546893 Q6JHZ5 121 aa9.79□□□□□ -0.84
SLC38A1-204ENST00000546893 WFDC11Q8NEX6 87 aa9.79□□□□□ -0.84
SLC38A1-204ENST00000546893 LINC00308Q8TCZ7 52 aa9.79□□□□□ -0.84
SLC38A1-204ENST00000546893 DOPEY2Q9Y3R5 2298 aa9.79□□□□□ -0.84
SLC38A1-204ENST00000546893 INAFM2P0DMQ5 153 aa9.79□□□□□ -0.84
SLC38A1-204ENST00000546893 TRGV1A0A0A0MS02 117 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 C1orf158Q8N1D5 194 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 IGHV3-38A0A0C4DH36 116 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 C1orf195Q5TG92 126 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 MAPK1IP1LQ8NDC0 245 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 C16orf74Q96GX8 76 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 TMEM243Q9BU79 118 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 Q9H8V8 135 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 SERP1Q9Y6X1 66 aa9.78□□□□□ -0.84
SLC38A1-204ENST00000546893 SMIM1B2RUZ4 78 aa9.77□□□□□ -0.85
SLC38A1-204ENST00000546893 J3QKU1 62 aa9.77□□□□□ -0.85
SLC38A1-204ENST00000546893 FAM222AQ5U5X8 452 aa9.77□□□□□ -0.85
SLC38A1-204ENST00000546893 FP248Q71RG6 208 aaPredicted RBP9.77□□□□□ -0.85
SLC38A1-204ENST00000546893 CDC42SE2Q9NRR3 84 aa9.77□□□□□ -0.85
SLC38A1-204ENST00000546893 XCL2Q9UBD3 114 aa9.77□□□□□ -0.85
SLC38A1-204ENST00000546893 UBE2L6O14933 153 aa9.76□□□□□ -0.85
SLC38A1-204ENST00000546893 ZNF625Q96I27 306 aaPredicted RBP9.76□□□□□ -0.85
SLC38A1-204ENST00000546893 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
SLC38A1-204ENST00000546893 Q9UF83 564 aa9.76□□□□□ -0.85
SLC38A1-204ENST00000546893 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
SLC38A1-204ENST00000546893 FAM208BQ5VWN6 2430 aa9.75□□□□□ -0.85
SLC38A1-204ENST00000546893 A0A0U1RQV1 116 aa9.75□□□□□ -0.85
SLC38A1-204ENST00000546893 CCL24O00175 119 aa9.75□□□□□ -0.85
SLC38A1-204ENST00000546893 FAM218AQ96MZ4 157 aa9.75□□□□□ -0.85
SLC38A1-204ENST00000546893 LINC00846Q9NV44 126 aa9.75□□□□□ -0.85
SLC38A1-204ENST00000546893 A8MZ25 164 aa9.74□□□□□ -0.85
SLC38A1-204ENST00000546893 Q96MF0 132 aa9.74□□□□□ -0.85
SLC38A1-204ENST00000546893 UTP20O75691 2785 aaKnown RBP9.74□□□□□ -0.85
SLC38A1-204ENST00000546893 TRAV13-2A0A0B4J235 113 aa9.74□□□□□ -0.85
SLC38A1-204ENST00000546893 PRM2P04554 102 aa9.74□□□□□ -0.85
SLC38A1-204ENST00000546893 KRTAP10-9P60411 292 aa9.74□□□□□ -0.85
SLC38A1-204ENST00000546893 COX6A2Q02221 97 aa9.74□□□□□ -0.85
SLC38A1-204ENST00000546893 CHD6Q8TD26 2715 aa9.73□□□□□ -0.85
SLC38A1-204ENST00000546893 ASH1LQ9NR48 2969 aaKnown RBP9.73□□□□□ -0.85
SLC38A1-204ENST00000546893 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
SLC38A1-204ENST00000546893 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.73□□□□□ -0.85
SLC38A1-204ENST00000546893 DNAL4O96015 105 aa9.72□□□□□ -0.85
SLC38A1-204ENST00000546893 CR1P17927 2039 aa9.72□□□□□ -0.85
SLC38A1-204ENST00000546893 LRRK2Q5S007 2527 aa9.72□□□□□ -0.85
SLC38A1-204ENST00000546893 GHRHP01286 108 aa9.72□□□□□ -0.85
SLC38A1-204ENST00000546893 HILS1P60008 231 aa9.72□□□□□ -0.85
SLC38A1-204ENST00000546893 NTM-AS1Q6ZSK4 140 aa9.72□□□□□ -0.85
SLC38A1-204ENST00000546893 C20orf197Q8N268 126 aa9.72□□□□□ -0.85
SLC38A1-204ENST00000546893 Q6ZTI0 123 aa9.71□□□□□ -0.85
SLC38A1-204ENST00000546893 DNAJC9-AS1A6NH13 148 aa9.71□□□□□ -0.86
SLC38A1-204ENST00000546893 H7BZZ5 65 aa9.71□□□□□ -0.86
SLC38A1-204ENST00000546893 XCL1P47992 114 aa9.71□□□□□ -0.86
SLC38A1-204ENST00000546893 Q9HAA7 133 aa9.71□□□□□ -0.86
SLC38A1-204ENST00000546893 LYPD5Q6UWN5 251 aa9.7□□□□□ -0.86
SLC38A1-204ENST00000546893 BRK1Q8WUW1 75 aa9.7□□□□□ -0.86
SLC38A1-204ENST00000546893 C14orf132Q9NPU4 83 aa9.7□□□□□ -0.86
SLC38A1-204ENST00000546893 RPL28P46779 137 aaKnown RBP9.7□□□□□ -0.86
SLC38A1-204ENST00000546893 HIST2H2BCQ6DN03 193 aa9.7□□□□□ -0.86
SLC38A1-204ENST00000546893 HIST2H2BDQ6DRA6 164 aa9.7□□□□□ -0.86
SLC38A1-204ENST00000546893 CRYBG3Q68DQ2 2970 aa9.69□□□□□ -0.86
SLC38A1-204ENST00000546893 SPG11Q96JI7 2443 aa9.69□□□□□ -0.86
SLC38A1-204ENST00000546893 SMIM26A0A096LP01 95 aa9.69□□□□□ -0.86
SLC38A1-204ENST00000546893 FBN2P35556 2912 aa9.68□□□□□ -0.86
SLC38A1-204ENST00000546893 VPS13CQ709C8 3753 aa9.68□□□□□ -0.86
SLC38A1-204ENST00000546893 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
SLC38A1-204ENST00000546893 LINC00482Q8N8I6 264 aa9.68□□□□□ -0.86
SLC38A1-204ENST00000546893 COX7B2Q8TF08 81 aa9.68□□□□□ -0.86
SLC38A1-204ENST00000546893 NOP10Q9NPE3 64 aaKnown RBP9.68□□□□□ -0.86
SLC38A1-204ENST00000546893 KRTAP1-3Q8IUG1 177 aa9.67□□□□□ -0.86
SLC38A1-204ENST00000546893 CRPP02741 224 aa9.67□□□□□ -0.86
SLC38A1-204ENST00000546893 LINC00474Q9P2X8 69 aa9.67□□□□□ -0.86
SLC38A1-204ENST00000546893 CSPG4Q6UVK1 2322 aa9.67□□□□□ -0.86
SLC38A1-204ENST00000546893 USP9YO00507 2555 aaPredicted RBP9.66□□□□□ -0.86
SLC38A1-204ENST00000546893 IGLV1-51P01701 117 aa9.66□□□□□ -0.86
SLC38A1-204ENST00000546893 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
SLC38A1-204ENST00000546893 TRAV23DV6A0A075B6W5 121 aa9.66□□□□□ -0.86
SLC38A1-204ENST00000546893 IBA57-AS1B1ANH7 110 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms