RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 GAGE2AQ6NT46 116 aa5.93□□□□□ -1.46
VPS29-203ENST00000546588 GAGE2DQ9UEU5 116 aa5.93□□□□□ -1.46
VPS29-203ENST00000546588 TRGV1A0A0A0MS02 117 aa5.92□□□□□ -1.46
VPS29-203ENST00000546588 MGPP08493 103 aa5.92□□□□□ -1.46
VPS29-203ENST00000546588 ZNF56Q15929 161 aa5.92□□□□□ -1.46
VPS29-203ENST00000546588 FAM74A4Q5TZK3 123 aa5.92□□□□□ -1.46
VPS29-203ENST00000546588 RPL39LQ96EH5 51 aaKnown RBP5.92□□□□□ -1.46
VPS29-203ENST00000546588 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 SDHAF1A6NFY7 115 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 H3BRM9 83 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 K7EQD1 137 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 RHOHQ15669 191 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 PMCHL1Q16048 86 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 ORMDL2Q53FV1 153 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 SPATA12Q7Z6I5 190 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 NEXN-AS1Q8NBZ9 246 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 LAMTOR3Q9UHA4 124 aa5.91□□□□□ -1.46
VPS29-203ENST00000546588 HUWE1Q7Z6Z7 4374 aaKnown RBP5.91□□□□□ -1.46
VPS29-203ENST00000546588 TRAV8-6A0A0B4J262 113 aa5.9□□□□□ -1.46
VPS29-203ENST00000546588 HBDP02042 147 aa5.9□□□□□ -1.46
VPS29-203ENST00000546588 FCER1GP30273 86 aa5.9□□□□□ -1.46
VPS29-203ENST00000546588 RPL18AQ02543 176 aaKnown RBP5.9□□□□□ -1.46
VPS29-203ENST00000546588 LAGE3Q14657 143 aa5.9□□□□□ -1.46
VPS29-203ENST00000546588 FAM222AQ5U5X8 452 aa5.9□□□□□ -1.46
VPS29-203ENST00000546588 Q6ZVH6 145 aa5.9□□□□□ -1.46
VPS29-203ENST00000546588 SLC25A29Q8N8R3 303 aa5.9□□□□□ -1.46
VPS29-203ENST00000546588 DNHD1Q96M86 4753 aa5.9□□□□□ -1.47
VPS29-203ENST00000546588 TRBV7-3A0A075B6L6 115 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 H3BNG1 76 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 I3L3M4 83 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 TSHBP01222 138 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 SPART-AS1P0CW21 52 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 FABP2P12104 132 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 UBE2D3P61077 147 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 UBE2D2P62837 147 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 DAZ4Q86SG3 579 aaKnown RBP5.89□□□□□ -1.47
VPS29-203ENST00000546588 SBSPONQ8IVN8 264 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 RAB37Q96AX2 223 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 TOMM6Q96B49 74 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 B9D2Q9BPU9 175 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 Q9H8V8 135 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 DAZ3Q9NR90 486 aaKnown RBP5.89□□□□□ -1.47
VPS29-203ENST00000546588 CELA1Q9UNI1 258 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 NBEAL1Q6ZS30 2694 aa5.89□□□□□ -1.47
VPS29-203ENST00000546588 DNAH9Q9NYC9 4486 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 TRGV2A0A075B6R0 118 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 J3QQQ9 107 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 LEPROTL1O95214 131 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 MT-ATP8P03928 68 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 TMEM258P61165 79 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 BVES-AS1Q5T3Y7 98 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 C9orf153Q5TBE3 101 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 Q5XG85 94 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 Q75L30 129 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 FAM19A2Q8N3H0 131 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 C10orf126Q8N4M7 172 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 Q8N976 141 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 PRO0255Q9UI72 69 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
VPS29-203ENST00000546588 LOC389332A0A1B0GUA5 103 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 SNCGO76070 127 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 ATP5G1P05496 136 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 P0DMU3 169 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 FAM231AP0DMU4 169 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 FAM231CP0DMU5 169 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 PFN2P35080 140 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 HERVK_113P63121 156 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 RPL36AP83881 106 aaKnown RBP5.87□□□□□ -1.47
VPS29-203ENST00000546588 PRR26Q8N8Z3 221 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 RPL36ALQ969Q0 106 aaKnown RBP5.87□□□□□ -1.47
VPS29-203ENST00000546588 TIMM17AQ99595 171 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 PMCHL2Q9BQD1 86 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 PYGO1Q9Y3Y4 419 aa5.87□□□□□ -1.47
VPS29-203ENST00000546588 IGIPA6NJ69 53 aa5.86□□□□□ -1.47
VPS29-203ENST00000546588 C3orf79P0CE67 100 aa5.86□□□□□ -1.47
VPS29-203ENST00000546588 LINC01561Q8N1V8 128 aa5.86□□□□□ -1.47
VPS29-203ENST00000546588 C20orf203Q8NBC4 194 aa5.86□□□□□ -1.47
VPS29-203ENST00000546588 CHCHD7Q9BUK0 85 aa5.86□□□□□ -1.47
VPS29-203ENST00000546588 TIMM21Q9BVV7 248 aa5.86□□□□□ -1.47
VPS29-203ENST00000546588 IGHV3-73A0A0B4J1V6 119 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 TRAV12-1A0A0B4J245 112 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 TRGV4A0A0C4DH28 118 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 A0A1B0GWB2 263 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 H7C423 109 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 DAD1P61803 113 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 C12orf74Q32Q52 190 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 LINC01545Q5VT33 79 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 LGALS9CQ6DKI2 356 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 ATOH7Q8N100 152 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 ANKRD29Q8N6D5 301 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 VSIG2Q96IQ7 327 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 HHLA3Q9XRX5 114 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 COL7A1Q02388 2944 aa5.85□□□□□ -1.47
VPS29-203ENST00000546588 A0A1W2PPM0 123 aa5.84□□□□□ -1.47
VPS29-203ENST00000546588 UQCRQO14949 82 aa5.84□□□□□ -1.47
VPS29-203ENST00000546588 DEFB130BP0DP73 79 aa5.84□□□□□ -1.47
VPS29-203ENST00000546588 DEFB130AP0DP74 79 aa5.84□□□□□ -1.47
VPS29-203ENST00000546588 FGF6P10767 208 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms