RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 F5H768 121 aa11.59□□□□□ -0.55
CHFR-224ENST00000545046 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
CHFR-224ENST00000545046 TEX48A0A1B0GUV7 120 aa11.58□□□□□ -0.56
CHFR-224ENST00000545046 TMEM262E9PQX1 116 aa11.58□□□□□ -0.56
CHFR-224ENST00000545046 APOMO95445 188 aa11.58□□□□□ -0.56
CHFR-224ENST00000545046 RPL24P83731 157 aaKnown RBP11.58□□□□□ -0.56
CHFR-224ENST00000545046 IGKV3OR2-268A0A0C4DH90 116 aa11.58□□□□□ -0.56
CHFR-224ENST00000545046 SMIM1B2RUZ4 78 aa11.58□□□□□ -0.56
CHFR-224ENST00000545046 NDUFA1O15239 70 aa11.58□□□□□ -0.56
CHFR-224ENST00000545046 MUSTN1Q8IVN3 82 aa11.57□□□□□ -0.56
CHFR-224ENST00000545046 TRAV26-1A0A087WT03 109 aa11.57□□□□□ -0.56
CHFR-224ENST00000545046 HTN3P15516 51 aa11.57□□□□□ -0.56
CHFR-224ENST00000545046 A0A1B0GUV1 79 aa11.56□□□□□ -0.56
CHFR-224ENST00000545046 LITAFQ99732 161 aa11.56□□□□□ -0.56
CHFR-224ENST00000545046 PGPEP1Q9NXJ5 209 aa11.56□□□□□ -0.56
CHFR-224ENST00000545046 CFC1BP0CG36 223 aa11.55□□□□□ -0.56
CHFR-224ENST00000545046 CFC1P0CG37 223 aa11.55□□□□□ -0.56
CHFR-224ENST00000545046 SPANXDQ9BXN6 97 aa11.55□□□□□ -0.56
CHFR-224ENST00000545046 SPANXCQ9NY87 97 aa11.55□□□□□ -0.56
CHFR-224ENST00000545046 TIMM17BO60830 172 aa11.55□□□□□ -0.56
CHFR-224ENST00000545046 SVIPQ8NHG7 77 aa11.55□□□□□ -0.56
CHFR-224ENST00000545046 A4D1N5 150 aa11.54□□□□□ -0.56
CHFR-224ENST00000545046 PRSS2P07478 247 aa11.54□□□□□ -0.56
CHFR-224ENST00000545046 RBX1P62877 108 aa11.54□□□□□ -0.56
CHFR-224ENST00000545046 CIRBPQ14011 172 aaKnown RBP11.54□□□□□ -0.56
CHFR-224ENST00000545046 MRPL23Q16540 153 aaKnown RBP11.54□□□□□ -0.56
CHFR-224ENST00000545046 Q9H8V8 135 aa11.54□□□□□ -0.56
CHFR-224ENST00000545046 MAST4O15021 2626 aa11.53□□□□□ -0.56
CHFR-224ENST00000545046 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
CHFR-224ENST00000545046 MIAQ16674 131 aa11.53□□□□□ -0.56
CHFR-224ENST00000545046 ADAMTSL4-AS1Q5T5F5 129 aa11.53□□□□□ -0.56
CHFR-224ENST00000545046 SH2D6Q7Z4S9 175 aa11.53□□□□□ -0.56
CHFR-224ENST00000545046 G3V4G9 280 aa11.52□□□□□ -0.56
CHFR-224ENST00000545046 RETNQ9HD89 108 aa11.52□□□□□ -0.56
CHFR-224ENST00000545046 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.56
CHFR-224ENST00000545046 STAB1Q9NY15 2570 aa11.52□□□□□ -0.56
CHFR-224ENST00000545046 LINC00959A0A1B0GUT2 108 aa11.52□□□□□ -0.57
CHFR-224ENST00000545046 PRO1854Q9UHT4 67 aa11.52□□□□□ -0.57
CHFR-224ENST00000545046 TSPAN13O95857 204 aa11.51□□□□□ -0.57
CHFR-224ENST00000545046 SS18Q15532 418 aa11.51□□□□□ -0.57
CHFR-224ENST00000545046 HERV-K104P63124 156 aa11.5□□□□□ -0.57
CHFR-224ENST00000545046 CMYA5Q8N3K9 4069 aa11.5□□□□□ -0.57
CHFR-224ENST00000545046 IGHV3OR16-9A0A0B4J2B5 98 aa11.5□□□□□ -0.57
CHFR-224ENST00000545046 A0A0B4J2C4 111 aa11.5□□□□□ -0.57
CHFR-224ENST00000545046 IFITM1P13164 125 aa11.5□□□□□ -0.57
CHFR-224ENST00000545046 COX7B2Q8TF08 81 aa11.49□□□□□ -0.57
CHFR-224ENST00000545046 ZNF625Q96I27 306 aaPredicted RBP11.49□□□□□ -0.57
CHFR-224ENST00000545046 A0A087WZ39 114 aa11.48□□□□□ -0.57
CHFR-224ENST00000545046 MEIG1Q5JSS6 88 aa11.48□□□□□ -0.57
CHFR-224ENST00000545046 LOC107984156A0A0G2JMH3 177 aa11.47□□□□□ -0.57
CHFR-224ENST00000545046 NPC2P61916 151 aa11.47□□□□□ -0.57
CHFR-224ENST00000545046 LYRM7Q5U5X0 104 aa11.47□□□□□ -0.57
CHFR-224ENST00000545046 ARL17AQ8IVW1 177 aa11.47□□□□□ -0.57
CHFR-224ENST00000545046 C11orf68Q9H3H3 251 aaKnown RBP11.47□□□□□ -0.57
CHFR-224ENST00000545046 TOMM7Q9P0U1 55 aa11.47□□□□□ -0.57
CHFR-224ENST00000545046 PKD1L1Q8TDX9 2849 aa11.47□□□□□ -0.57
CHFR-224ENST00000545046 LELP1Q5T871 98 aa11.47□□□□□ -0.57
CHFR-224ENST00000545046 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
CHFR-224ENST00000545046 ERG28Q9UKR5 140 aa11.46□□□□□ -0.57
CHFR-224ENST00000545046 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
CHFR-224ENST00000545046 LINC00269Q8N2A0 174 aa11.45□□□□□ -0.58
CHFR-224ENST00000545046 DAND5Q8N907 189 aa11.45□□□□□ -0.58
CHFR-224ENST00000545046 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
CHFR-224ENST00000545046 IGHV3-33P01772 117 aa11.45□□□□□ -0.58
CHFR-224ENST00000545046 ANGP03950 147 aaKnown RBP11.45□□□□□ -0.58
CHFR-224ENST00000545046 XCL1P47992 114 aa11.45□□□□□ -0.58
CHFR-224ENST00000545046 A0A0U1RRA0 63 aa11.44□□□□□ -0.58
CHFR-224ENST00000545046 EIF4EBP3O60516 100 aaPredicted RBP11.44□□□□□ -0.58
CHFR-224ENST00000545046 SFTA2Q6UW10 78 aa11.44□□□□□ -0.58
CHFR-224ENST00000545046 H3BMG7 143 aa11.44□□□□□ -0.58
CHFR-224ENST00000545046 H3BNG1 76 aa11.43□□□□□ -0.58
CHFR-224ENST00000545046 LINC00308Q8TCZ7 52 aa11.43□□□□□ -0.58
CHFR-224ENST00000545046 H7C2G1 150 aa11.42□□□□□ -0.58
CHFR-224ENST00000545046 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
CHFR-224ENST00000545046 PSMB2P49721 201 aa11.42□□□□□ -0.58
CHFR-224ENST00000545046 REG3AQ06141 175 aa11.42□□□□□ -0.58
CHFR-224ENST00000545046 Q1RN00 199 aa11.42□□□□□ -0.58
CHFR-224ENST00000545046 A0A0J9YWU9 116 aa11.41□□□□□ -0.58
CHFR-224ENST00000545046 F8W1H4 67 aa11.41□□□□□ -0.58
CHFR-224ENST00000545046 LYPD5Q6UWN5 251 aa11.41□□□□□ -0.58
CHFR-224ENST00000545046 Q6ZTC4 211 aa11.41□□□□□ -0.58
CHFR-224ENST00000545046 LINC01561Q8N1V8 128 aa11.41□□□□□ -0.58
CHFR-224ENST00000545046 KPRPQ5T749 579 aaPredicted RBP11.4□□□□□ -0.58
CHFR-224ENST00000545046 Q8N3U1 123 aa11.4□□□□□ -0.58
CHFR-224ENST00000545046 C6orf226Q5I0X4 101 aa11.4□□□□□ -0.59
CHFR-224ENST00000545046 CD164L2Q6UWJ8 174 aa11.4□□□□□ -0.59
CHFR-224ENST00000545046 TRBV20-1A0A075B6N2 111 aa11.39□□□□□ -0.59
CHFR-224ENST00000545046 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
CHFR-224ENST00000545046 COL6A5A8TX70 2615 aa11.39□□□□□ -0.59
CHFR-224ENST00000545046 DNAH3Q8TD57 4116 aa11.39□□□□□ -0.59
CHFR-224ENST00000545046 OCIAD2Q56VL3 154 aa11.38□□□□□ -0.59
CHFR-224ENST00000545046 C11orf45Q8TAV5 145 aa11.38□□□□□ -0.59
CHFR-224ENST00000545046 COX7A2LO14548 114 aa11.37□□□□□ -0.59
CHFR-224ENST00000545046 IGLV10-54A0A075B6I4 117 aa11.37□□□□□ -0.59
CHFR-224ENST00000545046 NANOS2P60321 138 aaKnown RBP11.37□□□□□ -0.59
CHFR-224ENST00000545046 Q8IZM0 81 aa11.37□□□□□ -0.59
CHFR-224ENST00000545046 PPDPFQ9H3Y8 114 aa11.37□□□□□ -0.59
CHFR-224ENST00000545046 TCL1BO95988 128 aa11.36□□□□□ -0.59
CHFR-224ENST00000545046 PRB2P02812 416 aaPredicted RBP11.36□□□□□ -0.59
CHFR-224ENST00000545046 LINC00158P58513 81 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms