RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 UBE2D1P51668 147 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 SNRPEP62304 92 aaKnown RBP6.44□□□□□ -1.38
VEGFB-204ENST00000543462 CNBPP62633 177 aaKnown RBP6.44□□□□□ -1.38
VEGFB-204ENST00000543462 SS18Q15532 418 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 C14orf177Q52M58 125 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 Q6ZSA8 131 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 FA2HQ7L5A8 372 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 ERASQ7Z444 233 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 IGLV5-52A0A0A0MRZ9 124 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 TRAV13-1A0A0B4J241 112 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 LINC01549A6NIU2 74 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 IFITM10A6NMD0 228 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 CDK2AP2O75956 126 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 G0S2P27469 103 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 PDZD11Q5EBL8 140 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 LINC00242Q5T6M2 205 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 ZC2HC1BQ5TFG8 222 aa6.43□□□□□ -1.38
VEGFB-204ENST00000543462 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
VEGFB-204ENST00000543462 GCSHP23434 173 aa6.42□□□□□ -1.38
VEGFB-204ENST00000543462 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
VEGFB-204ENST00000543462 IGHV1-58A0A0C4DH39 117 aa6.41□□□□□ -1.38
VEGFB-204ENST00000543462 HBDP02042 147 aa6.41□□□□□ -1.38
VEGFB-204ENST00000543462 TEX43Q6ZNM6 134 aa6.41□□□□□ -1.38
VEGFB-204ENST00000543462 LINC00518Q8N0U6 118 aa6.41□□□□□ -1.38
VEGFB-204ENST00000543462 CHCHD1Q96BP2 118 aaKnown RBP6.41□□□□□ -1.38
VEGFB-204ENST00000543462 PACRGQ96M98 296 aaPredicted RBP6.41□□□□□ -1.38
VEGFB-204ENST00000543462 COX7A2LO14548 114 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 S100A2P29034 98 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 NDUFA6P56556 154 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 COX6A2Q02221 97 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 PMCHL1Q16048 86 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 Q6ZN92 141 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 HIST3H2BBQ8N257 126 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 C9orf163Q8N9P6 203 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 SCGB3A1Q96QR1 104 aa6.4□□□□□ -1.38
VEGFB-204ENST00000543462 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 A0A087WZ39 114 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 hDV102S1A0JD36 115 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 XGP55808 180 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 LINC01620Q4KN68 170 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 PAPPA-AS1Q5QFB9 102 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 CFAP161Q6P656 301 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 C2orf88Q9BSF0 95 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 VCX2Q9H322 139 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 CST9LQ9H4G1 147 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 FAM30AQ9NZY2 134 aa6.39□□□□□ -1.39
VEGFB-204ENST00000543462 IGHV3-64A0A075B6Q5 118 aa6.38□□□□□ -1.39
VEGFB-204ENST00000543462 NUPR1O60356 82 aa6.38□□□□□ -1.39
VEGFB-204ENST00000543462 SERF1AO75920 110 aa6.38□□□□□ -1.39
VEGFB-204ENST00000543462 AKR1D1P51857 326 aa6.38□□□□□ -1.39
VEGFB-204ENST00000543462 HIGD2BQ4VC39 106 aa6.38□□□□□ -1.39
VEGFB-204ENST00000543462 C5orf38Q86SI9 138 aa6.38□□□□□ -1.39
VEGFB-204ENST00000543462 LINC01561Q8N1V8 128 aa6.38□□□□□ -1.39
VEGFB-204ENST00000543462 CIRBPQ14011 172 aaKnown RBP6.37□□□□□ -1.39
VEGFB-204ENST00000543462 KIAA0087Q14695 138 aa6.37□□□□□ -1.39
VEGFB-204ENST00000543462 PMVKQ15126 192 aa6.37□□□□□ -1.39
VEGFB-204ENST00000543462 SDIM1Q6ZPB5 146 aa6.37□□□□□ -1.39
VEGFB-204ENST00000543462 OR10D4PQ8NGN7 298 aa6.37□□□□□ -1.39
VEGFB-204ENST00000543462 FAT1Q14517 4588 aa6.37□□□□□ -1.39
VEGFB-204ENST00000543462 IGLV4-69A0A075B6H9 119 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 A0A0J9YXV3 536 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.36□□□□□ -1.39
VEGFB-204ENST00000543462 ATP5LO75964 103 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 IGLC3P0DOY3 106 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 S100A12P80511 92 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 LINC00526Q96FQ7 95 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 HIST1H2BLQ99880 126 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 CDKN2A-AS1Q9UH64 79 aa6.36□□□□□ -1.39
VEGFB-204ENST00000543462 PANO1I0J062 215 aa6.35□□□□□ -1.39
VEGFB-204ENST00000543462 HERVK_113P63121 156 aa6.35□□□□□ -1.39
VEGFB-204ENST00000543462 SEC11AP67812 179 aa6.35□□□□□ -1.39
VEGFB-204ENST00000543462 SPAG11BQ08648 103 aa6.35□□□□□ -1.39
VEGFB-204ENST00000543462 BAGE3Q86Y29 109 aa6.35□□□□□ -1.39
VEGFB-204ENST00000543462 FAM19A2Q8N3H0 131 aa6.35□□□□□ -1.39
VEGFB-204ENST00000543462 C2orf48Q96LS8 159 aa6.35□□□□□ -1.39
VEGFB-204ENST00000543462 C12orf57Q99622 126 aa6.35□□□□□ -1.39
VEGFB-204ENST00000543462 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.39
VEGFB-204ENST00000543462 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
VEGFB-204ENST00000543462 HSBP1O75506 76 aa6.34□□□□□ -1.39
VEGFB-204ENST00000543462 APOMO95445 188 aa6.34□□□□□ -1.39
VEGFB-204ENST00000543462 MALP21145 153 aa6.34□□□□□ -1.39
VEGFB-204ENST00000543462 Q6ZRU5 148 aa6.34□□□□□ -1.39
VEGFB-204ENST00000543462 ORAOV1Q8WV07 137 aa6.34□□□□□ -1.39
VEGFB-204ENST00000543462 CARD19Q96LW7 228 aa6.34□□□□□ -1.39
VEGFB-204ENST00000543462 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.34□□□□□ -1.39
VEGFB-204ENST00000543462 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.33□□□□□ -1.4
VEGFB-204ENST00000543462 F8WDY8 70 aa6.33□□□□□ -1.4
VEGFB-204ENST00000543462 SYCNQ0VAF6 134 aa6.33□□□□□ -1.4
VEGFB-204ENST00000543462 SCXQ7RTU7 201 aa6.33□□□□□ -1.4
VEGFB-204ENST00000543462 IFI27L1Q96BM0 104 aa6.33□□□□□ -1.4
VEGFB-204ENST00000543462 IGLV5-39A0A0G2JS06 123 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 C11orf86A6NJI1 115 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 ZNF561-AS1K7EIQ3 104 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 FABP4P15090 132 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 ZNF22P17026 224 aaPredicted RBP6.32□□□□□ -1.4
VEGFB-204ENST00000543462 HAMPP81172 84 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 JOSD1Q15040 202 aaPredicted RBP6.32□□□□□ -1.4
VEGFB-204ENST00000543462 RNF151Q2KHN1 245 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms