RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 FAM104AQ969W3 186 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 CHCHD5Q9BSY4 110 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 NXT2Q9NPJ8 142 aaKnown RBP4.57□□□□□ -1.68
PAAF1-212ENST00000543079 IGLV4-60A0A075B6I1 120 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 H7C423 109 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 K7EMI3 77 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BKO60814 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 IGHV3-30P01768 117 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 IGHV3-33P01772 117 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BJP06899 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 IGHV3-30-3P0DP02 117 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 IGHV3-30-5P0DP03 117 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BOP23527 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BBP33778 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BDP58876 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BCP62807 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 RBX1P62877 108 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 RPL39P62891 51 aaKnown RBP4.56□□□□□ -1.68
PAAF1-212ENST00000543079 Q0VG73 95 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST2H2BEQ16778 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.56□□□□□ -1.68
PAAF1-212ENST00000543079 Q8N976 141 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BHQ93079 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BNQ99877 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 HIST1H2BMQ99879 126 aa4.56□□□□□ -1.68
PAAF1-212ENST00000543079 A0A096LNJ9 63 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 NBDYA0A0U1RRE5 68 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 TMEM262E9PQX1 116 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 NUPR1O60356 82 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 LINC00614P0C842 121 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 FGF6P10767 208 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 LAGE3Q14657 143 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 MRPL52Q86TS9 123 aaKnown RBP4.55□□□□□ -1.68
PAAF1-212ENST00000543079 UBE2D4Q9Y2X8 147 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 LRP1BQ9NZR2 4599 aa4.55□□□□□ -1.68
PAAF1-212ENST00000543079 A0A087WX48 190 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 IGIPA6NJ69 53 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 IBA57-AS1B1ANH7 110 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 K7EP13 123 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 ORMDL2Q53FV1 153 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 ENHOQ6UWT2 76 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 C2orf66Q6UXQ4 117 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 FA2HQ7L5A8 372 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 TIMM21Q9BVV7 248 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 PRR34Q9NV39 138 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
PAAF1-212ENST00000543079 CSDC2Q9Y534 153 aaKnown RBP4.54□□□□□ -1.68
PAAF1-212ENST00000543079 UBE2L6O14933 153 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 SERF1AO75920 110 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 ZNF25P17030 456 aaPredicted RBP4.53□□□□□ -1.68
PAAF1-212ENST00000543079 RAB5BP61020 215 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 PKIAP61925 76 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 PMCHL1Q16048 86 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 LBHQ53QV2 105 aaPredicted RBP4.53□□□□□ -1.68
PAAF1-212ENST00000543079 RNASEKQ6P5S7 137 aaKnown RBP4.53□□□□□ -1.68
PAAF1-212ENST00000543079 BAGE3Q86Y29 109 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 LINC00269Q8N2A0 174 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 TOMM6Q96B49 74 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 CHCHD1Q96BP2 118 aaKnown RBP4.53□□□□□ -1.68
PAAF1-212ENST00000543079 OPRPNQ99935 248 aaPredicted RBP4.53□□□□□ -1.68
PAAF1-212ENST00000543079 CDC42SE2Q9NRR3 84 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 CYSLTR1Q9Y271 337 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 PYGO1Q9Y3Y4 419 aa4.53□□□□□ -1.68
PAAF1-212ENST00000543079 FLG2Q5D862 2391 aaPredicted RBP4.53□□□□□ -1.68
PAAF1-212ENST00000543079 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 MYCBP2O75592 4640 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 DNAH5Q8TE73 4624 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 IGLV4-3A0A075B6K6 122 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 TRAV9-2A0A087WT02 112 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 C1orf196B1AJZ1 125 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 ANGP03950 147 aaKnown RBP4.52□□□□□ -1.69
PAAF1-212ENST00000543079 MRPS36P82909 103 aaKnown RBP4.52□□□□□ -1.69
PAAF1-212ENST00000543079 PDZD11Q5EBL8 140 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 TTC32Q5I0X7 151 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 COA6Q5JTJ3 125 aaKnown RBP4.52□□□□□ -1.69
PAAF1-212ENST00000543079 AMMECR1LQ6DCA0 310 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
PAAF1-212ENST00000543079 Q6ZUT4 128 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 ZNF664Q8N3J9 261 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 OR5A1Q8NGJ0 315 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 SPANXA1Q9NS26 97 aa4.52□□□□□ -1.69
PAAF1-212ENST00000543079 HBDP02042 147 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 RPL24P83731 157 aaKnown RBP4.51□□□□□ -1.69
PAAF1-212ENST00000543079 REG3AQ06141 175 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 RNASE13Q5GAN3 156 aaKnown RBP4.51□□□□□ -1.69
PAAF1-212ENST00000543079 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 C1orf134Q5TEV5 83 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 CLPSL2Q6UWE3 100 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 LINC00173Q6ZV60 143 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 ERASQ7Z444 233 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 FAM19A2Q8N3H0 131 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 UBE2WQ96B02 151 aa4.51□□□□□ -1.69
PAAF1-212ENST00000543079 TRAV8-3A0A0A6YYJ7 113 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 HSBP1O75506 76 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 G0S2P27469 103 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 NDUFA6P56556 154 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 ZC2HC1BQ5TFG8 222 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms