RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 TINCRA0A1B0GVN0 87 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 DPM2O94777 84 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 SCGB1D1O95968 90 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 CRPP02741 224 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 HERVK_113P63121 156 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 REG3AQ06141 175 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 MIAQ16674 131 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 LINC00269Q8N2A0 174 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 Q9H8V8 135 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 MRPL35Q9NZE8 188 aaKnown RBP8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 LRP1BQ9NZR2 4599 aa8.32□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IGLV4-69A0A075B6H9 119 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IGHV3-30P01768 117 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IGHV3-33P01772 117 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IGKCP01834 107 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IGHV3-30-3P0DP02 117 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IGHV3-30-5P0DP03 117 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 SS18Q15532 418 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 PYY3Q5JQD4 70 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 MAPKAPK5-AS1Q8N8E1 139 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 KLK12Q9UKR0 248 aa8.31□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IGLV5-45A0A087WSX0 123 aa8.3□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IBA57-AS1B1ANH7 110 aa8.3□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 Q8N3U1 123 aa8.3□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 CHAC1Q9BUX1 264 aa8.3□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 TRAV8-3A0A0A6YYJ7 113 aa8.29□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 LINC00242Q5T6M2 205 aa8.29□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 GEMIN7Q9H840 131 aaKnown RBP8.29□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 A0A0J9YXV3 536 aa8.28□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 H3BRM9 83 aa8.28□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 ENHOQ6UWT2 76 aa8.28□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 RMI2Q96E14 147 aa8.28□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 HMCN2Q8NDA2 5059 aa8.27□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 CD164L2Q6UWJ8 174 aa8.27□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 PMCHL2Q9BQD1 86 aa8.27□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 HSBP1L1C9JCN9 74 aa8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 ZNF22P17026 224 aaPredicted RBP8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 HERVK_113P61574 105 aa8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 CLPSL2Q6UWE3 100 aa8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 Q8N1X5 172 aa8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 COX11Q9Y6N1 276 aa8.26□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 S100A12P80511 92 aa8.25□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 TMEM170BQ5T4T1 132 aa8.25□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 C1orf43Q9BWL3 253 aa8.25□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 A0A087WZ39 114 aa8.24□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 VAMP8Q9BV40 100 aa8.24□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 CDKN2A-AS1Q9UH64 79 aa8.24□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 DNAH5Q8TE73 4624 aa8.23□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 TMEM223A0PJW6 202 aa8.23□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 XCL1P47992 114 aa8.23□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 ATOH7Q8N100 152 aa8.23□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 TM2D2Q9BX73 214 aa8.23□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 E9PLD3 99 aa8.22□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 COX7A2LO14548 114 aa8.22□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 COX6A2Q02221 97 aa8.22□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 FOXI1Q12951 378 aa8.22□□□□□ -1.09
CACNA1C-IT3-201ENST00000542680 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 IGHV1-58A0A0C4DH39 117 aa8.21□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 IGLV5-39A0A0G2JS06 123 aa8.21□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 GAGE12HA6NDE8 117 aa8.21□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 KRTAP26-1Q6PEX3 210 aa8.21□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 KRTAP1-5Q9BYS1 174 aa8.21□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 IGKV2D-24A0A075B6R9 120 aa8.2□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 hDV102S1A0JD36 115 aa8.2□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 SMIM1B2RUZ4 78 aa8.2□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 APOMO95445 188 aa8.2□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 Q6ZR54 194 aa8.2□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 LINC00518Q8N0U6 118 aa8.2□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 C12orf57Q99622 126 aa8.2□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 MALP21145 153 aa8.19□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 STPG4Q8N801 248 aa8.19□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 Q9HAA7 133 aa8.19□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 LEPROTO15243 131 aa8.18□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 SPATA45Q537H7 98 aa8.18□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 ANKRD39Q53RE8 183 aa8.18□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 CDPF1Q6NVV7 123 aa8.18□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 PAM16Q9Y3D7 125 aa8.18□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 IGHV3-64A0A075B6Q5 118 aa8.17□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 RTL8CO15255 209 aa8.17□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 NMUP48645 174 aa8.17□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 MAJINQ3KP22 176 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms