RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 A8MZ25 164 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 TMEM262E9PQX1 116 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 CIDEAO60543 219 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 MT-ATP8P03928 68 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 Q6ZSV7 163 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 TMEM101Q96IK0 257 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 GEMIN7Q9H840 131 aaKnown RBP3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 ICOSQ9Y6W8 199 aa3.71□□□□□ -1.81
ATPAF1-212ENST00000542495 A0A1B0GV72 72 aa3.71□□□□□ -1.82
ATPAF1-212ENST00000542495 H7C2G1 150 aa3.71□□□□□ -1.82
ATPAF1-212ENST00000542495 PRSS2P07478 247 aa3.71□□□□□ -1.82
ATPAF1-212ENST00000542495 HERVK_113P63121 156 aa3.71□□□□□ -1.82
ATPAF1-212ENST00000542495 COX6A2Q02221 97 aa3.71□□□□□ -1.82
ATPAF1-212ENST00000542495 LINC00242Q5T6M2 205 aa3.71□□□□□ -1.82
ATPAF1-212ENST00000542495 PPDPFQ9H3Y8 114 aa3.71□□□□□ -1.82
ATPAF1-212ENST00000542495 XCL2Q9UBD3 114 aa3.71□□□□□ -1.82
ATPAF1-212ENST00000542495 TRAV4A0A0B4J268 109 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 LST1O00453 97 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 LINC00694P0DN24 101 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 DAZ2Q13117 558 aaKnown RBP3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 Q1RN00 199 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 NTM-AS1Q6ZSK4 140 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 DAZ4Q86SG3 579 aaKnown RBP3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 STHQ8IWL8 128 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 Q96MF0 132 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 CITED1Q99966 193 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 DAZ3Q9NR90 486 aaKnown RBP3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 ACANP16112 2415 aa3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 MAP1AP78559 2803 aaPredicted RBP3.7□□□□□ -1.82
ATPAF1-212ENST00000542495 TRGV1A0A0A0MS02 117 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 DNAJC9-AS1A6NH13 148 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 SMIM1B2RUZ4 78 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 F5H768 121 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 H3BT86 120 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 H7C423 109 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 K7EQD1 137 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 GIG44P09565 113 aaPredicted RBP3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 CKS1BP61024 79 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 RPL36AP83881 106 aaKnown RBP3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 DEFB121Q5J5C9 76 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 HIST2H2BDQ6DRA6 164 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 TEX29Q8N6K0 151 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 WFDC11Q8NEX6 87 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 NTN5Q8WTR8 489 aaPredicted RBP3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 RPL36ALQ969Q0 106 aaKnown RBP3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 CDC42SE2Q9NRR3 84 aa3.69□□□□□ -1.82
ATPAF1-212ENST00000542495 PLAC8L1A1L4L8 177 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 CCL24O00175 119 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 COX6CP09669 75 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 CMC4P56277 68 aaPredicted RBP3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 CIRBPQ14011 172 aaKnown RBP3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 Q6ZTI0 123 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 LINC00308Q8TCZ7 52 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 FAM110AQ9BQ89 295 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 FLNAP21333 2647 aaKnown RBP3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 TEX49A0A1B0GTD5 131 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 NPC2P61916 151 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 C2orf82Q6UX34 121 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 SOSTDC1Q6X4U4 206 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 DAND5Q8N907 189 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 UBE2WQ96B02 151 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 SMR3AQ99954 134 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 OVOL2Q9BRP0 275 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 Q9H8V8 135 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 ESM1Q9NQ30 184 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 ZANQ9Y493 2812 aa3.68□□□□□ -1.82
ATPAF1-212ENST00000542495 MXRA5Q9NR99 2828 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 NDUFA7O95182 113 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 LY6G6DO95868 133 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 HERV-K104P63124 156 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 CSNK1G2-AS1Q8NCQ2 148 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 COPS9Q8WXC6 57 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 CLEC2BQ92478 149 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 C16orf74Q96GX8 76 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 C16orf95Q9H693 158 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 DNHD1Q96M86 4753 aa3.67□□□□□ -1.82
ATPAF1-212ENST00000542495 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 TRBV6-4A0A1B0GX49 114 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 GAGE12JA6NER3 117 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 COX7A2LO14548 114 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 GAGE4Q13068 117 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 GAGE5Q13069 117 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 MRPL23Q16540 153 aaKnown RBP3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 Q6Q795 121 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 SPATA3Q8NHX4 192 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 TMEM243Q9BU79 118 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 NOP10Q9NPE3 64 aaKnown RBP3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 TRAV13-1A0A0B4J241 112 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 IGLV1-51P01701 117 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 KRTAP1-1Q07627 177 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 PRIMA1Q86XR5 153 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 LINC01006Q8NI28 216 aa3.66□□□□□ -1.82
ATPAF1-212ENST00000542495 NSD1Q96L73 2696 aaPredicted RBP3.65□□□□□ -1.82
ATPAF1-212ENST00000542495 CRLF1O75462 422 aa3.65□□□□□ -1.83
ATPAF1-212ENST00000542495 TRACP01848 142 aa3.65□□□□□ -1.83
ATPAF1-212ENST00000542495 FN1P02751 2386 aaKnown RBP3.65□□□□□ -1.83
ATPAF1-212ENST00000542495 HIVEP2P31629 2446 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 LOC100131303A0A0U1RQF7 123 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms