RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 SVILO95425 2214 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 PRRC2AP48634 2157 aaKnown RBP3.02□□□□□ -1.93
SNHG1-219ENST00000542112 PRR14LQ5THK1 2151 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 ZGRF1Q86YA3 2104 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 CACNA1GO43497 2377 aa3.02□□□□□ -1.93
SNHG1-219ENST00000542112 INTS1Q8N201 2190 aaKnown RBP3.01□□□□□ -1.93
SNHG1-219ENST00000542112 SPTBN2O15020 2390 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV3-15A0A0B4J1V0 119 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 IGKV2-29A2NJV5 120 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-219ENST00000542112 H3BPC8 53 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 NCR3O14931 201 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 LECT2O14960 151 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV4-30-4P0DP06 118 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 B3GALT5-AS1P59052 145 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 RPL39P62891 51 aaKnown RBP3.01□□□□□ -1.93
SNHG1-219ENST00000542112 HAMPP81172 84 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 IGFL3Q6UXB1 125 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 CASC2Q6XLA1 102 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 SCXQ7RTU7 201 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 Q8TAT8 98 aa3.01□□□□□ -1.93
SNHG1-219ENST00000542112 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
SNHG1-219ENST00000542112 VPS13AQ96RL7 3174 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 A0A087WYN8 130 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV1-3A0A0C4DH29 117 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 A0A1W2PNU3 283 aaPredicted RBP3□□□□□ -1.93
SNHG1-219ENST00000542112 K7EIM0 57 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV4-31P0DP07 118 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 PRR3P79522 188 aaKnown RBP3□□□□□ -1.93
SNHG1-219ENST00000542112 ESPL1Q14674 2120 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 KLK9Q2XQG4 91 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 HCP5Q6MZN7 132 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 Q8N814 137 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 Q8N9P0 234 aaPredicted RBP3□□□□□ -1.93
SNHG1-219ENST00000542112 SPTSSBQ8NFR3 76 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 SMIM11BQ8TCY0 68 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 KLK9Q9UKQ9 250 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 CELA1Q9UNI1 258 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 ACACAQ13085 2346 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 VCANP13611 3396 aa3□□□□□ -1.93
SNHG1-219ENST00000542112 DMDP11532 3685 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV1OR15-1A0A075B7D0 117 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 IGLV5-52A0A0A0MRZ9 124 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 A6NED7 52 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 M0QY20 66 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 CCL24O00175 119 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV4-38-2P0DP08 117 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 RPL36AP83881 106 aaKnown RBP2.99□□□□□ -1.93
SNHG1-219ENST00000542112 MRGPRG-AS1Q2M3A8 158 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 NTM-AS1Q6ZSK4 140 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 LINC00337Q8N6G1 96 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 WFDC9Q8NEX5 89 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 MUC7Q8TAX7 377 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 ARRDC1-AS1Q9H2J1 176 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 SND1-IT1Q9HBX3 110 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 APC2O95996 2303 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 PCNX1Q96RV3 2341 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 PTPRQQ9UMZ3 2332 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 MUC3AQ02505 3323 aa2.99□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV3-64A0A075B6Q5 118 aa2.98□□□□□ -1.93
SNHG1-219ENST00000542112 C11orf72Q8NBR9 251 aa2.98□□□□□ -1.93
SNHG1-219ENST00000542112 SPTBN4Q9H254 2564 aa2.98□□□□□ -1.93
SNHG1-219ENST00000542112 FRYLO94915 3013 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 IGLV5-37A0A075B6J1 123 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV6-1A0A0B4J1U7 121 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 TRBV6-4A0A1B0GX49 114 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 K7EQG2 157 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 IGHV3-48P01763 117 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 RNASE3P12724 160 aaKnown RBP2.97□□□□□ -1.93
SNHG1-219ENST00000542112 NDPQ00604 133 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 C6orf99Q4VX62 202 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 C10orf55Q5SWW7 151 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 C9orf129Q5T035 196 aaKnown RBP2.97□□□□□ -1.93
SNHG1-219ENST00000542112 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 PRSS33Q8NF86 280 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 LINC00208Q96KT6 92 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 B9D2Q9BPU9 175 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 LINC00467Q9BRT7 94 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 XAGE1AQ9HD64 81 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 WDFY4Q6ZS81 3184 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 CACNA1DQ01668 2161 aa2.97□□□□□ -1.93
SNHG1-219ENST00000542112 ZFHX2Q9C0A1 2572 aaPredicted RBP2.97□□□□□ -1.93
SNHG1-219ENST00000542112 IGLV11-55A0A075B6I3 123 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 IGKV2-28A0A075B6P5 120 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV3-49A0A0A0MS15 119 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV3-20A0A0C4DH32 117 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 IGHV3-38A0A0C4DH36 116 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 IGKV2D-28P01615 120 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 MOBPQ13875 183 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 ZFAND2AQ8N6M9 145 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 RETNLBQ9BQ08 111 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 HIGD2AQ9BW72 106 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 LINC01558Q9Y6Z2 57 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 SPEGQ15772 3267 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 MYO15AQ9UKN7 3530 aa2.96□□□□□ -1.94
SNHG1-219ENST00000542112 AKAP13Q12802 2813 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 CADP27708 2225 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 IGLV3-9A0A075B6K5 115 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 ETDCA0A1B0GVM5 59 aa2.95□□□□□ -1.94
SNHG1-219ENST00000542112 SMIM1B2RUZ4 78 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms