RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 HIVEP1P15822 2718 aa7.59□□□□□ -1.19
NECAP1-206ENST00000542095 CIRBPQ14011 172 aaKnown RBP7.59□□□□□ -1.19
NECAP1-206ENST00000542095 ADAMTSL4-AS1Q5T5F5 129 aa7.59□□□□□ -1.19
NECAP1-206ENST00000542095 RBX1P62877 108 aa7.59□□□□□ -1.2
NECAP1-206ENST00000542095 CBY1Q9Y3M2 126 aa7.59□□□□□ -1.2
NECAP1-206ENST00000542095 F5H768 121 aa7.58□□□□□ -1.2
NECAP1-206ENST00000542095 Q9H8V8 135 aa7.58□□□□□ -1.2
NECAP1-206ENST00000542095 IGLV4-60A0A075B6I1 120 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 IGHV4-28A0A0C4DH34 117 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 IGHV3-33P01772 117 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 IFITM1P13164 125 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 MIFP14174 115 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 RNF151Q2KHN1 245 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 ERG28Q9UKR5 140 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 PAX4O43316 350 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
NECAP1-206ENST00000542095 PSMB2P49721 201 aa7.57□□□□□ -1.2
NECAP1-206ENST00000542095 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
NECAP1-206ENST00000542095 DEFB4AO15263 64 aa7.56□□□□□ -1.2
NECAP1-206ENST00000542095 DAD1P61803 113 aa7.56□□□□□ -1.2
NECAP1-206ENST00000542095 RNF183Q96D59 192 aa7.56□□□□□ -1.2
NECAP1-206ENST00000542095 IGKV3OR2-268A0A0C4DH90 116 aa7.56□□□□□ -1.2
NECAP1-206ENST00000542095 IGHV4-30-4P0DP06 118 aa7.56□□□□□ -1.2
NECAP1-206ENST00000542095 SCGB1C2P0DMR2 95 aa7.55□□□□□ -1.2
NECAP1-206ENST00000542095 HERV-K104P63124 156 aa7.55□□□□□ -1.2
NECAP1-206ENST00000542095 WFDC2Q14508 124 aa7.55□□□□□ -1.2
NECAP1-206ENST00000542095 Q8NAQ8 132 aa7.55□□□□□ -1.2
NECAP1-206ENST00000542095 PRO0461Q9UI25 63 aa7.55□□□□□ -1.2
NECAP1-206ENST00000542095 NPC2P61916 151 aa7.55□□□□□ -1.2
NECAP1-206ENST00000542095 Q1RN00 199 aa7.55□□□□□ -1.2
NECAP1-206ENST00000542095 PRIMA1Q86XR5 153 aa7.55□□□□□ -1.2
NECAP1-206ENST00000542095 ZNF625Q96I27 306 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-206ENST00000542095 TMEM262E9PQX1 116 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 H7C2G1 150 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 PCP4P48539 62 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 COPS9Q8WXC6 57 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 G3V4G9 280 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 TCL1BO95988 128 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 ATP5G1P05496 136 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
NECAP1-206ENST00000542095 VWFP04275 2813 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 SPART-AS1P0CW21 52 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 MTURNQ8N3F0 131 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 DAND5Q8N907 189 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 COX7B2Q8TF08 81 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 VPS25Q9BRG1 176 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 TEP1Q99973 2627 aaKnown RBP7.53□□□□□ -1.2
NECAP1-206ENST00000542095 A0A096LPF7 62 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 IGHV3OR16-9A0A0B4J2B5 98 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 TEX48A0A1B0GUV7 120 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 CELA1Q9UNI1 258 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 MAST4O15021 2626 aa7.53□□□□□ -1.2
NECAP1-206ENST00000542095 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.21
NECAP1-206ENST00000542095 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
NECAP1-206ENST00000542095 A0A087WZ39 114 aa7.52□□□□□ -1.21
NECAP1-206ENST00000542095 TENM1Q9UKZ4 2725 aa7.52□□□□□ -1.21
NECAP1-206ENST00000542095 TRBV30A0A0K0K1B3 111 aa7.51□□□□□ -1.21
NECAP1-206ENST00000542095 SS18Q15532 418 aa7.51□□□□□ -1.21
NECAP1-206ENST00000542095 KRTAP24-1Q3LI83 254 aa7.51□□□□□ -1.21
NECAP1-206ENST00000542095 ETDBQ3ZM63 59 aa7.51□□□□□ -1.21
NECAP1-206ENST00000542095 TRAV26-1A0A087WT03 109 aa7.51□□□□□ -1.21
NECAP1-206ENST00000542095 A0A0U1RRA0 63 aa7.51□□□□□ -1.21
NECAP1-206ENST00000542095 SH2D6Q7Z4S9 175 aa7.51□□□□□ -1.21
NECAP1-206ENST00000542095 TOMM7Q9P0U1 55 aa7.51□□□□□ -1.21
NECAP1-206ENST00000542095 ATRQ13535 2644 aa7.5□□□□□ -1.21
NECAP1-206ENST00000542095 OXLD1Q5BKU9 147 aa7.5□□□□□ -1.21
NECAP1-206ENST00000542095 F8P00451 2351 aa7.5□□□□□ -1.21
NECAP1-206ENST00000542095 J3QR89 54 aa7.49□□□□□ -1.21
NECAP1-206ENST00000542095 C5orf38Q86SI9 138 aa7.49□□□□□ -1.21
NECAP1-206ENST00000542095 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
NECAP1-206ENST00000542095 ICOSQ9Y6W8 199 aa7.49□□□□□ -1.21
NECAP1-206ENST00000542095 TRIAP1O43715 76 aa7.49□□□□□ -1.21
NECAP1-206ENST00000542095 RPL13AP40429 203 aaKnown RBP7.49□□□□□ -1.21
NECAP1-206ENST00000542095 SMCPP49901 116 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-206ENST00000542095 ATXN8Q156A1 80 aa7.49□□□□□ -1.21
NECAP1-206ENST00000542095 MRPL23Q16540 153 aaKnown RBP7.49□□□□□ -1.21
NECAP1-206ENST00000542095 C3orf56Q8N813 242 aa7.49□□□□□ -1.21
NECAP1-206ENST00000542095 COX6CP09669 75 aa7.48□□□□□ -1.21
NECAP1-206ENST00000542095 HTN3P15516 51 aa7.48□□□□□ -1.21
NECAP1-206ENST00000542095 XCL1P47992 114 aa7.48□□□□□ -1.21
NECAP1-206ENST00000542095 KRTAP10-11P60412 298 aa7.48□□□□□ -1.21
NECAP1-206ENST00000542095 SHISA2Q6UWI4 295 aa7.48□□□□□ -1.21
NECAP1-206ENST00000542095 SOSTDC1Q6X4U4 206 aa7.48□□□□□ -1.21
NECAP1-206ENST00000542095 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
NECAP1-206ENST00000542095 LINC01561Q8N1V8 128 aa7.47□□□□□ -1.21
NECAP1-206ENST00000542095 EGFEM1PQ0D2K5 195 aa7.47□□□□□ -1.21
NECAP1-206ENST00000542095 TRRAPQ9Y4A5 3859 aa7.47□□□□□ -1.21
NECAP1-206ENST00000542095 LINC00269Q8N2A0 174 aa7.46□□□□□ -1.21
NECAP1-206ENST00000542095 C9JAW5 83 aa7.46□□□□□ -1.22
NECAP1-206ENST00000542095 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
NECAP1-206ENST00000542095 LELP1Q5T871 98 aa7.46□□□□□ -1.22
NECAP1-206ENST00000542095 NBEAL2Q6ZNJ1 2754 aa7.45□□□□□ -1.22
NECAP1-206ENST00000542095 IBA57-AS1B1ANH7 110 aa7.45□□□□□ -1.22
NECAP1-206ENST00000542095 SLC25A20O43772 301 aa7.45□□□□□ -1.22
NECAP1-206ENST00000542095 MIR7-3HGQ8N6C7 128 aa7.45□□□□□ -1.22
NECAP1-206ENST00000542095 M0QXV9 152 aa7.45□□□□□ -1.22
NECAP1-206ENST00000542095 LINC00158P58513 81 aa7.45□□□□□ -1.22
NECAP1-206ENST00000542095 C6orf226Q5I0X4 101 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms