RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 SPANXB1Q9NS25 103 aaPredicted RBP12.23□□□□□ -0.45
GABARAPL1-210ENST00000541960 A0A0J9YXY3 114 aa12.22□□□□□ -0.45
GABARAPL1-210ENST00000541960 H3BUT2 72 aa12.22□□□□□ -0.45
GABARAPL1-210ENST00000541960 CCL25O15444 150 aa12.22□□□□□ -0.45
GABARAPL1-210ENST00000541960 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
GABARAPL1-210ENST00000541960 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
GABARAPL1-210ENST00000541960 C12orf74Q32Q52 190 aa12.22□□□□□ -0.45
GABARAPL1-210ENST00000541960 NDUFA12Q9UI09 145 aa12.22□□□□□ -0.45
GABARAPL1-210ENST00000541960 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.45
GABARAPL1-210ENST00000541960 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.45
GABARAPL1-210ENST00000541960 SMIM1B2RUZ4 78 aa12.21□□□□□ -0.45
GABARAPL1-210ENST00000541960 UBE2V1Q13404 147 aa12.21□□□□□ -0.46
GABARAPL1-210ENST00000541960 ZFAND6Q6FIF0 208 aa12.2□□□□□ -0.46
GABARAPL1-210ENST00000541960 A0A1B0GWB2 263 aa12.2□□□□□ -0.46
GABARAPL1-210ENST00000541960 PRB2P02812 416 aaPredicted RBP12.2□□□□□ -0.46
GABARAPL1-210ENST00000541960 LITAFQ99732 161 aa12.2□□□□□ -0.46
GABARAPL1-210ENST00000541960 TMEM262E9PQX1 116 aa12.18□□□□□ -0.46
GABARAPL1-210ENST00000541960 RBX1P62877 108 aa12.18□□□□□ -0.46
GABARAPL1-210ENST00000541960 Q8N3U1 123 aa12.18□□□□□ -0.46
GABARAPL1-210ENST00000541960 A0A1B0GUV1 79 aa12.17□□□□□ -0.46
GABARAPL1-210ENST00000541960 ADAMTSL4-AS1Q5T5F5 129 aa12.17□□□□□ -0.46
GABARAPL1-210ENST00000541960 A0A1W2PPM0 123 aa12.16□□□□□ -0.46
GABARAPL1-210ENST00000541960 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
GABARAPL1-210ENST00000541960 IGLL5B9A064 214 aa12.15□□□□□ -0.46
GABARAPL1-210ENST00000541960 NDUFA1O15239 70 aa12.15□□□□□ -0.46
GABARAPL1-210ENST00000541960 MGAM2Q2M2H8 2515 aa12.15□□□□□ -0.46
GABARAPL1-210ENST00000541960 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.47
GABARAPL1-210ENST00000541960 LINC00959A0A1B0GUT2 108 aa12.14□□□□□ -0.47
GABARAPL1-210ENST00000541960 TMEM238C9JI98 176 aa12.14□□□□□ -0.47
GABARAPL1-210ENST00000541960 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
GABARAPL1-210ENST00000541960 IGHV3OR16-9A0A0B4J2B5 98 aa12.14□□□□□ -0.47
GABARAPL1-210ENST00000541960 CLPSL2Q6UWE3 100 aa12.14□□□□□ -0.47
GABARAPL1-210ENST00000541960 Q6ZTC4 211 aa12.14□□□□□ -0.47
GABARAPL1-210ENST00000541960 MUSTN1Q8IVN3 82 aa12.14□□□□□ -0.47
GABARAPL1-210ENST00000541960 HUWE1Q7Z6Z7 4374 aaKnown RBP12.13□□□□□ -0.47
GABARAPL1-210ENST00000541960 EIF4EBP3O60516 100 aaPredicted RBP12.13□□□□□ -0.47
GABARAPL1-210ENST00000541960 ICOSQ9Y6W8 199 aa12.13□□□□□ -0.47
GABARAPL1-210ENST00000541960 A0A0J9YWU9 116 aa12.13□□□□□ -0.47
GABARAPL1-210ENST00000541960 Q9H8V8 135 aa12.13□□□□□ -0.47
GABARAPL1-210ENST00000541960 CFC1BP0CG36 223 aa12.12□□□□□ -0.47
GABARAPL1-210ENST00000541960 CFC1P0CG37 223 aa12.12□□□□□ -0.47
GABARAPL1-210ENST00000541960 APOMO95445 188 aa12.12□□□□□ -0.47
GABARAPL1-210ENST00000541960 MDFIQ99750 246 aa12.12□□□□□ -0.47
GABARAPL1-210ENST00000541960 ZNF625Q96I27 306 aaPredicted RBP12.11□□□□□ -0.47
GABARAPL1-210ENST00000541960 A4D1N5 150 aa12.11□□□□□ -0.47
GABARAPL1-210ENST00000541960 K7EIL1 84 aa12.11□□□□□ -0.47
GABARAPL1-210ENST00000541960 GAGE10A6NGK3 116 aa12.1□□□□□ -0.47
GABARAPL1-210ENST00000541960 K7EP34 96 aa12.1□□□□□ -0.47
GABARAPL1-210ENST00000541960 DAND5Q8N907 189 aa12.1□□□□□ -0.47
GABARAPL1-210ENST00000541960 SPANXDQ9BXN6 97 aa12.1□□□□□ -0.47
GABARAPL1-210ENST00000541960 SPANXCQ9NY87 97 aa12.1□□□□□ -0.47
GABARAPL1-210ENST00000541960 C5orf38Q86SI9 138 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 LINC00269Q8N2A0 174 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 FABP2P12104 132 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 LELP1Q5T871 98 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 A0A087WZ39 114 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 XCL1P47992 114 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 NANOS2P60321 138 aaKnown RBP12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 MIAQ16674 131 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 SPCS1Q9Y6A9 102 aa12.09□□□□□ -0.47
GABARAPL1-210ENST00000541960 NPC2P61916 151 aa12.08□□□□□ -0.48
GABARAPL1-210ENST00000541960 TIMM17BO60830 172 aa12.07□□□□□ -0.48
GABARAPL1-210ENST00000541960 PRSS2P07478 247 aa12.07□□□□□ -0.48
GABARAPL1-210ENST00000541960 SH2D6Q7Z4S9 175 aa12.07□□□□□ -0.48
GABARAPL1-210ENST00000541960 TSPAN13O95857 204 aa12.07□□□□□ -0.48
GABARAPL1-210ENST00000541960 LYPD5Q6UWN5 251 aa12.07□□□□□ -0.48
GABARAPL1-210ENST00000541960 RPL24P83731 157 aaKnown RBP12.07□□□□□ -0.48
GABARAPL1-210ENST00000541960 KPRPQ5T749 579 aaPredicted RBP12.07□□□□□ -0.48
GABARAPL1-210ENST00000541960 ANGP03950 147 aaKnown RBP12.06□□□□□ -0.48
GABARAPL1-210ENST00000541960 COX7B2Q8TF08 81 aa12.06□□□□□ -0.48
GABARAPL1-210ENST00000541960 SS18Q15532 418 aa12.05□□□□□ -0.48
GABARAPL1-210ENST00000541960 A0A0U1RRA0 63 aa12.05□□□□□ -0.48
GABARAPL1-210ENST00000541960 TOMM7Q9P0U1 55 aa12.05□□□□□ -0.48
GABARAPL1-210ENST00000541960 GTF2H5Q6ZYL4 71 aa12.05□□□□□ -0.48
GABARAPL1-210ENST00000541960 MRAPQ8TCY5 172 aa12.05□□□□□ -0.48
GABARAPL1-210ENST00000541960 REG3AQ06141 175 aa12.04□□□□□ -0.48
GABARAPL1-210ENST00000541960 C11orf45Q8TAV5 145 aa12.04□□□□□ -0.48
GABARAPL1-210ENST00000541960 H3BNG1 76 aa12.04□□□□□ -0.48
GABARAPL1-210ENST00000541960 SFTA2Q6UW10 78 aa12.03□□□□□ -0.48
GABARAPL1-210ENST00000541960 TM2D3Q9BRN9 247 aa12.03□□□□□ -0.48
GABARAPL1-210ENST00000541960 IGLV10-54A0A075B6I4 117 aa12.03□□□□□ -0.48
GABARAPL1-210ENST00000541960 DEFB121Q5J5C9 76 aa12.03□□□□□ -0.48
GABARAPL1-210ENST00000541960 PRO1854Q9UHT4 67 aa12.03□□□□□ -0.48
GABARAPL1-210ENST00000541960 A0A0B4J2C4 111 aa12.01□□□□□ -0.49
GABARAPL1-210ENST00000541960 CHCHD10Q8WYQ3 142 aaPredicted RBP12.01□□□□□ -0.49
GABARAPL1-210ENST00000541960 SPATA25Q9BR10 227 aa12.01□□□□□ -0.49
GABARAPL1-210ENST00000541960 HERV-K104P63124 156 aa12.01□□□□□ -0.49
GABARAPL1-210ENST00000541960 DEFB131BA0A096LNP1 70 aa12.01□□□□□ -0.49
GABARAPL1-210ENST00000541960 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
GABARAPL1-210ENST00000541960 SOSTDC1Q6X4U4 206 aa12.01□□□□□ -0.49
GABARAPL1-210ENST00000541960 MEIG1Q5JSS6 88 aa12□□□□□ -0.49
GABARAPL1-210ENST00000541960 IGHV3-33P01772 117 aa12□□□□□ -0.49
GABARAPL1-210ENST00000541960 LINC00308Q8TCZ7 52 aa12□□□□□ -0.49
GABARAPL1-210ENST00000541960 CD164L2Q6UWJ8 174 aa11.99□□□□□ -0.49
GABARAPL1-210ENST00000541960 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.99□□□□□ -0.49
GABARAPL1-210ENST00000541960 WFDC10BQ8IUB3 73 aa11.99□□□□□ -0.49
GABARAPL1-210ENST00000541960 IFITM1P13164 125 aa11.99□□□□□ -0.49
GABARAPL1-210ENST00000541960 KLK12Q9UKR0 248 aa11.99□□□□□ -0.49
GABARAPL1-210ENST00000541960 PRR34Q9NV39 138 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms