RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 OR10D4PQ8NGN7 298 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 TIMM21Q9BVV7 248 aa7.9□□□□□ -1.14
SCARB1-207ENST00000541661 MRPL35Q9NZE8 188 aaKnown RBP7.9□□□□□ -1.14
SCARB1-207ENST00000541661 HIGD1CA8MV81 97 aa7.89□□□□□ -1.15
SCARB1-207ENST00000541661 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
SCARB1-207ENST00000541661 PNRC1Q12796 327 aaPredicted RBP7.89□□□□□ -1.15
SCARB1-207ENST00000541661 KRTAP11-1Q8IUC1 163 aa7.89□□□□□ -1.15
SCARB1-207ENST00000541661 AMN1Q8IY45 258 aa7.89□□□□□ -1.15
SCARB1-207ENST00000541661 IMMP2LQ96T52 175 aa7.89□□□□□ -1.15
SCARB1-207ENST00000541661 A0A087WZ39 114 aa7.88□□□□□ -1.15
SCARB1-207ENST00000541661 PPP1R17O96001 155 aa7.88□□□□□ -1.15
SCARB1-207ENST00000541661 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
SCARB1-207ENST00000541661 SUMO2P61956 95 aaKnown RBP7.88□□□□□ -1.15
SCARB1-207ENST00000541661 Q6ZUT4 128 aa7.88□□□□□ -1.15
SCARB1-207ENST00000541661 NRACQ8N912 160 aa7.88□□□□□ -1.15
SCARB1-207ENST00000541661 KIR2DL4Q99706 377 aa7.88□□□□□ -1.15
SCARB1-207ENST00000541661 SMCO4Q9NRQ5 59 aa7.88□□□□□ -1.15
SCARB1-207ENST00000541661 FAM168BA1KXE4 195 aa7.87□□□□□ -1.15
SCARB1-207ENST00000541661 SMKR1H3BMG3 65 aa7.87□□□□□ -1.15
SCARB1-207ENST00000541661 TMEM18Q96B42 140 aa7.87□□□□□ -1.15
SCARB1-207ENST00000541661 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
SCARB1-207ENST00000541661 PPP1R2P9O14990 202 aa7.86□□□□□ -1.15
SCARB1-207ENST00000541661 TMEM241Q24JQ0 296 aa7.86□□□□□ -1.15
SCARB1-207ENST00000541661 ORAOV1Q8WV07 137 aa7.86□□□□□ -1.15
SCARB1-207ENST00000541661 FAM104AQ969W3 186 aa7.86□□□□□ -1.15
SCARB1-207ENST00000541661 NDUFA1O15239 70 aa7.85□□□□□ -1.15
SCARB1-207ENST00000541661 C10orf25Q5T742 122 aa7.85□□□□□ -1.15
SCARB1-207ENST00000541661 OSTCQ9NRP0 149 aa7.85□□□□□ -1.15
SCARB1-207ENST00000541661 NAT8Q9UHE5 227 aa7.85□□□□□ -1.15
SCARB1-207ENST00000541661 COLCA2A8K830 154 aa7.84□□□□□ -1.15
SCARB1-207ENST00000541661 RIGQ13278 110 aa7.84□□□□□ -1.15
SCARB1-207ENST00000541661 PRR4Q16378 134 aa7.84□□□□□ -1.15
SCARB1-207ENST00000541661 UNQ6190/PRO20217Q6UXQ8 127 aa7.84□□□□□ -1.15
SCARB1-207ENST00000541661 LINC01551Q86U37 167 aa7.84□□□□□ -1.15
SCARB1-207ENST00000541661 KRTAP7-1Q8IUC3 87 aa7.84□□□□□ -1.15
SCARB1-207ENST00000541661 CTDSP1Q9GZU7 261 aa7.84□□□□□ -1.15
SCARB1-207ENST00000541661 RPS10P5Q9NQ39 176 aa7.84□□□□□ -1.15
SCARB1-207ENST00000541661 TRBV24-1A0A075B6N3 115 aa7.83□□□□□ -1.16
SCARB1-207ENST00000541661 ZNF727A8MUV8 499 aa7.83□□□□□ -1.16
SCARB1-207ENST00000541661 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
SCARB1-207ENST00000541661 RPL32P62910 135 aaKnown RBP7.83□□□□□ -1.16
SCARB1-207ENST00000541661 FAM19A5Q7Z5A7 132 aaPredicted RBP7.83□□□□□ -1.16
SCARB1-207ENST00000541661 CBLN2Q8IUK8 224 aa7.83□□□□□ -1.16
SCARB1-207ENST00000541661 C20orf78Q9BR46 151 aa7.83□□□□□ -1.16
SCARB1-207ENST00000541661 C6orf48Q9UBA6 75 aa7.83□□□□□ -1.16
SCARB1-207ENST00000541661 A0A0U1RQV1 116 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 TCAPO15273 167 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 MT-ND4LP03901 98 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 UBE2D1P51668 147 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 CEBPGP53567 150 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 MRPS36P82909 103 aaKnown RBP7.82□□□□□ -1.16
SCARB1-207ENST00000541661 MRPL51Q4U2R6 128 aaKnown RBP7.82□□□□□ -1.16
SCARB1-207ENST00000541661 FAM104BQ5XKR9 115 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 YPEL4Q96NS1 127 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 SMIM7Q9BQ49 75 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 KRTAP9-2Q9BYQ4 174 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 V9GYV3 84 aa7.82□□□□□ -1.16
SCARB1-207ENST00000541661 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
SCARB1-207ENST00000541661 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
SCARB1-207ENST00000541661 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
SCARB1-207ENST00000541661 SPANXA1Q9NS26 97 aa7.81□□□□□ -1.16
SCARB1-207ENST00000541661 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
SCARB1-207ENST00000541661 M0QXV9 152 aa7.8□□□□□ -1.16
SCARB1-207ENST00000541661 RPL23P62829 140 aaKnown RBP7.8□□□□□ -1.16
SCARB1-207ENST00000541661 UBE2BP63146 152 aa7.8□□□□□ -1.16
SCARB1-207ENST00000541661 ANAPC16Q96DE5 110 aa7.8□□□□□ -1.16
SCARB1-207ENST00000541661 TRBV30A0A0K0K1B3 111 aa7.79□□□□□ -1.16
SCARB1-207ENST00000541661 HBBP68871 147 aa7.79□□□□□ -1.16
SCARB1-207ENST00000541661 NAT8BQ9UHF3 227 aa7.79□□□□□ -1.16
SCARB1-207ENST00000541661 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
SCARB1-207ENST00000541661 NDUFC2-KCTD14E9PQ53 114 aa7.78□□□□□ -1.16
SCARB1-207ENST00000541661 TMA7Q9Y2S6 64 aaKnown RBP7.78□□□□□ -1.16
SCARB1-207ENST00000541661 LOC105371267A0A1B0GV96 52 aa7.77□□□□□ -1.17
SCARB1-207ENST00000541661 ZNF861PO60384 105 aa7.77□□□□□ -1.17
SCARB1-207ENST00000541661 TNFRSF6BO95407 300 aa7.77□□□□□ -1.17
SCARB1-207ENST00000541661 CKS2P33552 79 aa7.77□□□□□ -1.17
SCARB1-207ENST00000541661 C9orf129Q5T035 196 aaKnown RBP7.77□□□□□ -1.17
SCARB1-207ENST00000541661 SMIM2Q9BVW6 85 aa7.77□□□□□ -1.17
SCARB1-207ENST00000541661 TGIF2-C20orf24A0A0A6YYL0 155 aa7.76□□□□□ -1.17
SCARB1-207ENST00000541661 A0A1B0GW15 77 aa7.76□□□□□ -1.17
SCARB1-207ENST00000541661 RAB5AP20339 215 aa7.76□□□□□ -1.17
SCARB1-207ENST00000541661 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
SCARB1-207ENST00000541661 FAT4Q6V0I7 4981 aa7.76□□□□□ -1.17
SCARB1-207ENST00000541661 SMIM27A0A1W2PRY6 76 aa7.75□□□□□ -1.17
SCARB1-207ENST00000541661 ADIRFQ15847 76 aa7.75□□□□□ -1.17
SCARB1-207ENST00000541661 LINC00242Q5T6M2 205 aa7.75□□□□□ -1.17
SCARB1-207ENST00000541661 PYGO1Q9Y3Y4 419 aa7.75□□□□□ -1.17
SCARB1-207ENST00000541661 NUPR1O60356 82 aa7.74□□□□□ -1.17
SCARB1-207ENST00000541661 C2orf82Q6UX34 121 aa7.74□□□□□ -1.17
SCARB1-207ENST00000541661 LINC01561Q8N1V8 128 aa7.74□□□□□ -1.17
SCARB1-207ENST00000541661 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
SCARB1-207ENST00000541661 TRAV9-1A0A075B6T8 112 aa7.73□□□□□ -1.17
SCARB1-207ENST00000541661 D6R8Y8 96 aa7.73□□□□□ -1.17
SCARB1-207ENST00000541661 IGLV4-3A0A075B6K6 122 aa7.72□□□□□ -1.17
SCARB1-207ENST00000541661 TSPAN13O95857 204 aa7.72□□□□□ -1.17
SCARB1-207ENST00000541661 NPYP01303 97 aa7.72□□□□□ -1.17
SCARB1-207ENST00000541661 IFI27P40305 119 aaPredicted RBP7.72□□□□□ -1.17
SCARB1-207ENST00000541661 RAB5BP61020 215 aa7.72□□□□□ -1.17
SCARB1-207ENST00000541661 PPBPP02775 128 aa7.71□□□□□ -1.18
SCARB1-207ENST00000541661 S100PP25815 95 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms