RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 EMP1P54849 157 aa7.59□□□□□ -1.19
CHFR-219ENST00000541341 KHDC1LQ5JSQ8 128 aa7.59□□□□□ -1.19
CHFR-219ENST00000541341 MEIG1Q5JSS6 88 aa7.59□□□□□ -1.19
CHFR-219ENST00000541341 C10orf99Q6UWK7 81 aa7.59□□□□□ -1.19
CHFR-219ENST00000541341 UNQ9165/PRO28630Q6UXU0 137 aa7.59□□□□□ -1.19
CHFR-219ENST00000541341 FAM19A3Q7Z5A8 133 aa7.59□□□□□ -1.19
CHFR-219ENST00000541341 TEX49A0A1B0GTD5 131 aa7.58□□□□□ -1.2
CHFR-219ENST00000541341 K7EQG2 157 aa7.58□□□□□ -1.2
CHFR-219ENST00000541341 HOXD3P31249 432 aaPredicted RBP7.58□□□□□ -1.2
CHFR-219ENST00000541341 KRTAP10-11P60412 298 aa7.58□□□□□ -1.2
CHFR-219ENST00000541341 DGAT2L7PQ6IED9 249 aa7.58□□□□□ -1.2
CHFR-219ENST00000541341 LITAFQ99732 161 aa7.58□□□□□ -1.2
CHFR-219ENST00000541341 CSDC2Q9Y534 153 aaKnown RBP7.58□□□□□ -1.2
CHFR-219ENST00000541341 TRAV13-2A0A0B4J235 113 aa7.57□□□□□ -1.2
CHFR-219ENST00000541341 ATOX1O00244 68 aa7.56□□□□□ -1.2
CHFR-219ENST00000541341 S100A7L2Q5SY68 101 aa7.56□□□□□ -1.2
CHFR-219ENST00000541341 MUC4Q99102 2169 aa7.55□□□□□ -1.2
CHFR-219ENST00000541341 A0A1B0GX51 115 aa7.55□□□□□ -1.2
CHFR-219ENST00000541341 A8MTW9 85 aa7.55□□□□□ -1.2
CHFR-219ENST00000541341 H0YGX0 51 aa7.55□□□□□ -1.2
CHFR-219ENST00000541341 ELANEP08246 267 aa7.55□□□□□ -1.2
CHFR-219ENST00000541341 PSMB8P28062 276 aa7.55□□□□□ -1.2
CHFR-219ENST00000541341 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
CHFR-219ENST00000541341 Q6ZQT7 251 aa7.55□□□□□ -1.2
CHFR-219ENST00000541341 LINC00527Q9UJ94 153 aa7.55□□□□□ -1.2
CHFR-219ENST00000541341 TRBV10-1A0A0K0K1A3 114 aa7.54□□□□□ -1.2
CHFR-219ENST00000541341 F6UB75 175 aa7.54□□□□□ -1.2
CHFR-219ENST00000541341 C3orf22Q8N5N4 141 aa7.54□□□□□ -1.2
CHFR-219ENST00000541341 UBE2D4Q9Y2X8 147 aa7.54□□□□□ -1.2
CHFR-219ENST00000541341 IGHV3-53P01767 116 aa7.53□□□□□ -1.2
CHFR-219ENST00000541341 CMC4P56277 68 aaPredicted RBP7.53□□□□□ -1.2
CHFR-219ENST00000541341 SDIM1Q6ZPB5 146 aa7.53□□□□□ -1.2
CHFR-219ENST00000541341 C18orf65Q6ZTR6 163 aa7.53□□□□□ -1.2
CHFR-219ENST00000541341 LINC00526Q96FQ7 95 aa7.53□□□□□ -1.2
CHFR-219ENST00000541341 JPT2Q9H910 190 aa7.53□□□□□ -1.2
CHFR-219ENST00000541341 TRAV8-3A0A0A6YYJ7 113 aa7.52□□□□□ -1.21
CHFR-219ENST00000541341 IGLV5-39A0A0G2JS06 123 aa7.52□□□□□ -1.21
CHFR-219ENST00000541341 CCDC179H3BU77 68 aa7.52□□□□□ -1.21
CHFR-219ENST00000541341 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
CHFR-219ENST00000541341 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
CHFR-219ENST00000541341 DUX3Q96PT4 197 aa7.52□□□□□ -1.21
CHFR-219ENST00000541341 DNAL4O96015 105 aa7.51□□□□□ -1.21
CHFR-219ENST00000541341 TRBV12-3P01733 135 aa7.51□□□□□ -1.21
CHFR-219ENST00000541341 IGHV3-11P01762 117 aa7.51□□□□□ -1.21
CHFR-219ENST00000541341 DAZ2Q13117 558 aaKnown RBP7.51□□□□□ -1.21
CHFR-219ENST00000541341 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
CHFR-219ENST00000541341 WFDC9Q8NEX5 89 aa7.51□□□□□ -1.21
CHFR-219ENST00000541341 UBE2E2Q96LR5 201 aa7.51□□□□□ -1.21
CHFR-219ENST00000541341 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
CHFR-219ENST00000541341 IGKV3-7A0A075B6H7 116 aa7.5□□□□□ -1.21
CHFR-219ENST00000541341 IGHV3-64A0A075B6Q5 118 aa7.5□□□□□ -1.21
CHFR-219ENST00000541341 J3KT08 172 aa7.5□□□□□ -1.21
CHFR-219ENST00000541341 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
CHFR-219ENST00000541341 BAALC-AS2P0C853 105 aa7.5□□□□□ -1.21
CHFR-219ENST00000541341 RPL28P46779 137 aaKnown RBP7.5□□□□□ -1.21
CHFR-219ENST00000541341 C5orf38Q86SI9 138 aa7.5□□□□□ -1.21
CHFR-219ENST00000541341 SMIM20Q8N5G0 67 aa7.5□□□□□ -1.21
CHFR-219ENST00000541341 CHCHD7Q9BUK0 85 aa7.5□□□□□ -1.21
CHFR-219ENST00000541341 RYR2Q92736 4967 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 RS1O15537 224 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 INSP01308 110 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 COX7CP15954 63 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 RPL36AP83881 106 aaKnown RBP7.49□□□□□ -1.21
CHFR-219ENST00000541341 SPINK13Q1W4C9 94 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 ADAMTSL4-AS1Q5T5F5 129 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 ATP5EP2Q5VTU8 51 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 LINC00482Q8N8I6 264 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 RPL36ALQ969Q0 106 aaKnown RBP7.49□□□□□ -1.21
CHFR-219ENST00000541341 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
CHFR-219ENST00000541341 OPRPNQ99935 248 aaPredicted RBP7.49□□□□□ -1.21
CHFR-219ENST00000541341 FAM236AA0A1B0GUQ0 79 aa7.48□□□□□ -1.21
CHFR-219ENST00000541341 FAM236BA0A1B0GV22 79 aa7.48□□□□□ -1.21
CHFR-219ENST00000541341 RBMY1BA6NDE4 496 aaKnown RBP7.48□□□□□ -1.21
CHFR-219ENST00000541341 RBMY1EA6NEQ0 496 aaKnown RBP7.48□□□□□ -1.21
CHFR-219ENST00000541341 H3BQ85 93 aa7.48□□□□□ -1.21
CHFR-219ENST00000541341 CRPP02741 224 aa7.48□□□□□ -1.21
CHFR-219ENST00000541341 RBMY1DP0C7P1 496 aaKnown RBP7.48□□□□□ -1.21
CHFR-219ENST00000541341 RBMY1A1P0DJD3 496 aaKnown RBP7.48□□□□□ -1.21
CHFR-219ENST00000541341 RBMY1CP0DJD4 496 aa7.48□□□□□ -1.21
CHFR-219ENST00000541341 CRYGAP11844 174 aa7.48□□□□□ -1.21
CHFR-219ENST00000541341 OR13C6PQ8NH95 151 aa7.48□□□□□ -1.21
CHFR-219ENST00000541341 CLEC2BQ92478 149 aa7.48□□□□□ -1.21
CHFR-219ENST00000541341 TRAV25A0A0B4J276 109 aa7.47□□□□□ -1.21
CHFR-219ENST00000541341 SPRY2O43597 315 aa7.47□□□□□ -1.21
CHFR-219ENST00000541341 C4orf3Q8WVX3 66 aa7.47□□□□□ -1.21
CHFR-219ENST00000541341 B9D2Q9BPU9 175 aa7.47□□□□□ -1.21
CHFR-219ENST00000541341 Q9H8V8 135 aa7.47□□□□□ -1.21
CHFR-219ENST00000541341 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
CHFR-219ENST00000541341 HUWE1Q7Z6Z7 4374 aaKnown RBP7.47□□□□□ -1.21
CHFR-219ENST00000541341 MALP21145 153 aa7.46□□□□□ -1.22
CHFR-219ENST00000541341 EGFEM1PQ0D2K5 195 aa7.46□□□□□ -1.22
CHFR-219ENST00000541341 DEFB136Q30KP8 78 aa7.46□□□□□ -1.22
CHFR-219ENST00000541341 Q6JHZ5 121 aa7.46□□□□□ -1.22
CHFR-219ENST00000541341 CDKN2A-AS1Q9UH64 79 aa7.46□□□□□ -1.22
CHFR-219ENST00000541341 TRAV12-2A0A075B6T6 113 aa7.45□□□□□ -1.22
CHFR-219ENST00000541341 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
CHFR-219ENST00000541341 BCE1O60756 84 aa7.45□□□□□ -1.22
CHFR-219ENST00000541341 TMEM258P61165 79 aa7.45□□□□□ -1.22
CHFR-219ENST00000541341 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
CHFR-219ENST00000541341 LINC01587Q99440 93 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms