RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PMVKQ15126 192 aa6.25□□□□□ -1.41
DDX55-208ENST00000541259 C3orf79P0CE67 100 aa6.24□□□□□ -1.41
DDX55-208ENST00000541259 UBE2D1P51668 147 aa6.24□□□□□ -1.41
DDX55-208ENST00000541259 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
DDX55-208ENST00000541259 TTC32Q5I0X7 151 aa6.24□□□□□ -1.41
DDX55-208ENST00000541259 PAPPA-AS1Q5QFB9 102 aa6.24□□□□□ -1.41
DDX55-208ENST00000541259 PACRGQ96M98 296 aaPredicted RBP6.24□□□□□ -1.41
DDX55-208ENST00000541259 TRAV8-3A0A0A6YYJ7 113 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 A0A0J9YXV3 536 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 K7EP13 123 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 CCL25O15444 150 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 KRTDAPP60985 99 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 COX6A2Q02221 97 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 MIAQ16674 131 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 LINC00242Q5T6M2 205 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 CHCHD10Q8WYQ3 142 aaPredicted RBP6.23□□□□□ -1.41
DDX55-208ENST00000541259 PMCHL2Q9BQD1 86 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 C2orf88Q9BSF0 95 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 FAT2Q9NYQ8 4349 aa6.23□□□□□ -1.41
DDX55-208ENST00000541259 RYR3Q15413 4870 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 IGLV4-69A0A075B6H9 119 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 IGKV2D-24A0A075B6R9 120 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 TRAV12-1A0A0B4J245 112 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 GAGE12HA6NDE8 117 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 SYS1-DBNDD2H3BUS1 97 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 XCL1P47992 114 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 ODF1Q14990 250 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 SS18Q15532 418 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 OR10D4PQ8NGN7 298 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 MRPL35Q9NZE8 188 aaKnown RBP6.22□□□□□ -1.41
DDX55-208ENST00000541259 CHTOPQ9Y3Y2 248 aaKnown RBP6.22□□□□□ -1.41
DDX55-208ENST00000541259 DNAH11Q96DT5 4516 aa6.22□□□□□ -1.41
DDX55-208ENST00000541259 TRAV8-4A0A0B4J246 113 aa6.21□□□□□ -1.42
DDX55-208ENST00000541259 FOXI1Q12951 378 aa6.21□□□□□ -1.42
DDX55-208ENST00000541259 FAM19A3Q7Z5A8 133 aa6.21□□□□□ -1.42
DDX55-208ENST00000541259 MAPKAPK5-AS1Q8N8E1 139 aa6.21□□□□□ -1.42
DDX55-208ENST00000541259 C1orf43Q9BWL3 253 aa6.21□□□□□ -1.42
DDX55-208ENST00000541259 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
DDX55-208ENST00000541259 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
DDX55-208ENST00000541259 IGLC3P0DOY3 106 aa6.2□□□□□ -1.42
DDX55-208ENST00000541259 C1orf134Q5TEV5 83 aa6.2□□□□□ -1.42
DDX55-208ENST00000541259 CD164L2Q6UWJ8 174 aa6.2□□□□□ -1.42
DDX55-208ENST00000541259 PET117Q6UWS5 81 aa6.2□□□□□ -1.42
DDX55-208ENST00000541259 Q6ZRN7 208 aaPredicted RBP6.2□□□□□ -1.42
DDX55-208ENST00000541259 C5orf38Q86SI9 138 aa6.2□□□□□ -1.42
DDX55-208ENST00000541259 C6orf223Q8N319 242 aa6.2□□□□□ -1.42
DDX55-208ENST00000541259 IGHV3OR16-9A0A0B4J2B5 98 aa6.19□□□□□ -1.42
DDX55-208ENST00000541259 F8VRH5 84 aa6.19□□□□□ -1.42
DDX55-208ENST00000541259 LINC01545Q5VT33 79 aa6.19□□□□□ -1.42
DDX55-208ENST00000541259 RMI2Q96E14 147 aa6.19□□□□□ -1.42
DDX55-208ENST00000541259 CHAC1Q9BUX1 264 aa6.19□□□□□ -1.42
DDX55-208ENST00000541259 CDKN2A-AS1Q9UH64 79 aa6.19□□□□□ -1.42
DDX55-208ENST00000541259 HECTD4Q9Y4D8 3996 aa6.18□□□□□ -1.42
DDX55-208ENST00000541259 RTL8CO15255 209 aa6.18□□□□□ -1.42
DDX55-208ENST00000541259 ZNF22P17026 224 aaPredicted RBP6.18□□□□□ -1.42
DDX55-208ENST00000541259 HERVK_113P63121 156 aa6.18□□□□□ -1.42
DDX55-208ENST00000541259 NFE4Q86UQ8 179 aa6.18□□□□□ -1.42
DDX55-208ENST00000541259 TM2D2Q9BX73 214 aa6.18□□□□□ -1.42
DDX55-208ENST00000541259 GEMIN7Q9H840 131 aaKnown RBP6.18□□□□□ -1.42
DDX55-208ENST00000541259 PKD1P98161 4303 aa6.17□□□□□ -1.42
DDX55-208ENST00000541259 IGLV5-45A0A087WSX0 123 aa6.17□□□□□ -1.42
DDX55-208ENST00000541259 LECT2O14960 151 aa6.17□□□□□ -1.42
DDX55-208ENST00000541259 PSCAO43653 123 aa6.17□□□□□ -1.42
DDX55-208ENST00000541259 DPM2O94777 84 aa6.17□□□□□ -1.42
DDX55-208ENST00000541259 WFDC2Q14508 124 aa6.17□□□□□ -1.42
DDX55-208ENST00000541259 LINC00469Q8N7U9 141 aa6.17□□□□□ -1.42
DDX55-208ENST00000541259 A0A087WZ39 114 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 LOC105371267A0A1B0GV96 52 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 COX7A2LO14548 114 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 SCGB1D1O95968 90 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 IGKCP01834 107 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 SEC11AP67812 179 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 TMEM170BQ5T4T1 132 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 ATOH7Q8N100 152 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 COX11Q9Y6N1 276 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 DNAH5Q8TE73 4624 aa6.16□□□□□ -1.42
DDX55-208ENST00000541259 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
DDX55-208ENST00000541259 USP17L23D6RBM5 183 aa6.15□□□□□ -1.42
DDX55-208ENST00000541259 SPINK8P0C7L1 97 aa6.15□□□□□ -1.42
DDX55-208ENST00000541259 PLNP26678 52 aa6.15□□□□□ -1.42
DDX55-208ENST00000541259 AKR1D1P51857 326 aa6.15□□□□□ -1.42
DDX55-208ENST00000541259 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
DDX55-208ENST00000541259 C15orf56Q8N910 161 aa6.15□□□□□ -1.42
DDX55-208ENST00000541259 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
DDX55-208ENST00000541259 IGHV3-64A0A075B6Q5 118 aa6.14□□□□□ -1.43
DDX55-208ENST00000541259 TMEM223A0PJW6 202 aa6.14□□□□□ -1.43
DDX55-208ENST00000541259 C20orf202A1L168 122 aa6.14□□□□□ -1.43
DDX55-208ENST00000541259 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
DDX55-208ENST00000541259 MALP21145 153 aa6.14□□□□□ -1.43
DDX55-208ENST00000541259 HIGD2BQ4VC39 106 aa6.14□□□□□ -1.43
DDX55-208ENST00000541259 STPG4Q8N801 248 aa6.14□□□□□ -1.43
DDX55-208ENST00000541259 LINC00526Q96FQ7 95 aa6.14□□□□□ -1.43
DDX55-208ENST00000541259 H3BRM9 83 aa6.13□□□□□ -1.43
DDX55-208ENST00000541259 JOSD1Q15040 202 aaPredicted RBP6.13□□□□□ -1.43
DDX55-208ENST00000541259 MAJINQ3KP22 176 aa6.13□□□□□ -1.43
DDX55-208ENST00000541259 LINC01561Q8N1V8 128 aa6.13□□□□□ -1.43
DDX55-208ENST00000541259 ORAOV1Q8WV07 137 aa6.13□□□□□ -1.43
DDX55-208ENST00000541259 A0A087WTM6 91 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms