RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 IGLV5-45A0A087WSX0 123 aa7.36□□□□□ -1.23
CDC42SE1-207ENST00000540998 EDA2RQ9HAV5 297 aa7.36□□□□□ -1.23
CDC42SE1-207ENST00000540998 COX7A2LO14548 114 aa7.36□□□□□ -1.23
CDC42SE1-207ENST00000540998 F5H768 121 aa7.36□□□□□ -1.23
CDC42SE1-207ENST00000540998 BAALC-AS2P0C853 105 aa7.36□□□□□ -1.23
CDC42SE1-207ENST00000540998 TIRAPP58753 221 aa7.36□□□□□ -1.23
CDC42SE1-207ENST00000540998 ATP5G1P05496 136 aa7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 RPL35AP18077 110 aaKnown RBP7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 HERVK_113P63121 156 aa7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 BEAN1Q3B7T3 259 aa7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 STHQ8IWL8 128 aa7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 LINC00337Q8N6G1 96 aa7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 RNF152Q8N8N0 203 aa7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 NOTCH2Q04721 2471 aa7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 IGHV4-31P0DP07 118 aa7.35□□□□□ -1.23
CDC42SE1-207ENST00000540998 MIR7-3HGQ8N6C7 128 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 CDC42SE2Q9NRR3 84 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 A8MTW9 85 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 PFN2P35080 140 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 GAGE2AQ6NT46 116 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 IGLV4-60A0A075B6I1 120 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 A0A087WYN8 130 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 K7EQD1 137 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 TIMM17BO60830 172 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
CDC42SE1-207ENST00000540998 TENM4Q6N022 2769 aa7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 SLPIP03973 132 aa7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 RPL36ALQ969Q0 106 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 LINC01600Q96MT4 127 aa7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 C5orf38Q86SI9 138 aa7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 PEMTQ9UBM1 199 aa7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 KLK5Q9Y337 293 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-207ENST00000540998 IGKV2-28A0A075B6P5 120 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 IGKV2D-28P01615 120 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 HERV-K104P63124 156 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 Q6Q795 121 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 DNAJC30Q96LL9 226 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 TRGV2A0A075B6R0 118 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 UBE2L6O14933 153 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 LINC00158P58513 81 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 DEFB121Q5J5C9 76 aa7.32□□□□□ -1.24
CDC42SE1-207ENST00000540998 SVIPQ8NHG7 77 aa7.31□□□□□ -1.24
CDC42SE1-207ENST00000540998 C4orf3Q8WVX3 66 aa7.31□□□□□ -1.24
CDC42SE1-207ENST00000540998 C14orf132Q9NPU4 83 aa7.31□□□□□ -1.24
CDC42SE1-207ENST00000540998 A0A096LPF7 62 aa7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 GIG44P09565 113 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 SND1-IT1Q9HBX3 110 aa7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 FAM240AA0A1B0GVK7 77 aa7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 FSHBP01225 129 aa7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 PRR3P79522 188 aaKnown RBP7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 HIST2H2BCQ6DN03 193 aa7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 SDIM1Q6ZPB5 146 aa7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 SMIM11BQ8TCY0 68 aa7.3□□□□□ -1.24
CDC42SE1-207ENST00000540998 IGKV3D-7A0A0C4DH55 119 aa7.29□□□□□ -1.24
CDC42SE1-207ENST00000540998 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
CDC42SE1-207ENST00000540998 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
CDC42SE1-207ENST00000540998 TENM1Q9UKZ4 2725 aa7.29□□□□□ -1.24
CDC42SE1-207ENST00000540998 CRPP02741 224 aa7.29□□□□□ -1.24
CDC42SE1-207ENST00000540998 OR13C6PQ8NH95 151 aa7.28□□□□□ -1.24
CDC42SE1-207ENST00000540998 NCR3O14931 201 aa7.28□□□□□ -1.24
CDC42SE1-207ENST00000540998 CCL18P55774 89 aa7.28□□□□□ -1.24
CDC42SE1-207ENST00000540998 IL17DQ8TAD2 202 aa7.28□□□□□ -1.24
CDC42SE1-207ENST00000540998 COX7B2Q8TF08 81 aa7.28□□□□□ -1.24
CDC42SE1-207ENST00000540998 A0A087WVE0 104 aa7.28□□□□□ -1.24
CDC42SE1-207ENST00000540998 PLAC8L1A1L4L8 177 aa7.28□□□□□ -1.24
CDC42SE1-207ENST00000540998 MALP21145 153 aa7.27□□□□□ -1.25
CDC42SE1-207ENST00000540998 CYSTM1Q9H1C7 97 aa7.27□□□□□ -1.25
CDC42SE1-207ENST00000540998 TRGV4A0A0C4DH28 118 aa7.27□□□□□ -1.25
CDC42SE1-207ENST00000540998 J3QLI3 93 aa7.27□□□□□ -1.25
CDC42SE1-207ENST00000540998 LECT2O14960 151 aa7.27□□□□□ -1.25
CDC42SE1-207ENST00000540998 DEFB130BP0DP73 79 aa7.27□□□□□ -1.25
CDC42SE1-207ENST00000540998 DEFB130AP0DP74 79 aa7.27□□□□□ -1.25
CDC42SE1-207ENST00000540998 ESM1Q9NQ30 184 aa7.27□□□□□ -1.25
CDC42SE1-207ENST00000540998 CCL24O00175 119 aa7.26□□□□□ -1.25
CDC42SE1-207ENST00000540998 DSCR9P59020 149 aa7.26□□□□□ -1.25
CDC42SE1-207ENST00000540998 Q8N3U1 123 aa7.26□□□□□ -1.25
CDC42SE1-207ENST00000540998 PAX4O43316 350 aa7.26□□□□□ -1.25
CDC42SE1-207ENST00000540998 XCL1P47992 114 aa7.26□□□□□ -1.25
CDC42SE1-207ENST00000540998 BBC3Q96PG8 261 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE1-207ENST00000540998 TRACP01848 142 aa7.26□□□□□ -1.25
CDC42SE1-207ENST00000540998 HELZ2Q9BYK8 2649 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-207ENST00000540998 FASNP49327 2511 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-207ENST00000540998 C9orf153Q5TBE3 101 aa7.25□□□□□ -1.25
CDC42SE1-207ENST00000540998 PKD1L1Q8TDX9 2849 aa7.25□□□□□ -1.25
CDC42SE1-207ENST00000540998 LOC107984640A0A0U1RRK4 108 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 DNAJC9-AS1A6NH13 148 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 MRPL23Q16540 153 aaKnown RBP7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 LINC00643Q86TS7 51 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 PPDPFQ9H3Y8 114 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 DNAL4O96015 105 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 CSDC2Q9Y534 153 aaKnown RBP7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 TRBV10-1A0A0K0K1A3 114 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 WFDC9Q8NEX5 89 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 WFDC11Q8NEX6 87 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 LINC00846Q9NV44 126 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 TRRAPQ9Y4A5 3859 aa7.24□□□□□ -1.25
CDC42SE1-207ENST00000540998 IGHV3OR16-9A0A0B4J2B5 98 aa7.23□□□□□ -1.25
CDC42SE1-207ENST00000540998 RPL28P46779 137 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms