RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 IMMP2LQ96T52 175 aa16.18■□□□□ 0.18
CHFR-218ENST00000540963 OPRPNQ99935 248 aaPredicted RBP16.18■□□□□ 0.18
CHFR-218ENST00000540963 A0A087WZ39 114 aa16.17■□□□□ 0.18
CHFR-218ENST00000540963 FCER1GP30273 86 aa16.17■□□□□ 0.18
CHFR-218ENST00000540963 C5orf38Q86SI9 138 aa16.17■□□□□ 0.18
CHFR-218ENST00000540963 SMDT1Q9H4I9 107 aa16.17■□□□□ 0.18
CHFR-218ENST00000540963 TRAV13-1A0A0B4J241 112 aa16.16■□□□□ 0.18
CHFR-218ENST00000540963 PPP1R17O96001 155 aa16.16■□□□□ 0.18
CHFR-218ENST00000540963 LINC00862A6NCI5 91 aa16.15■□□□□ 0.18
CHFR-218ENST00000540963 RPL32P62910 135 aaKnown RBP16.15■□□□□ 0.18
CHFR-218ENST00000540963 MRPL54Q6P161 138 aaKnown RBP16.15■□□□□ 0.18
CHFR-218ENST00000540963 Q6ZUT4 128 aa16.15■□□□□ 0.18
CHFR-218ENST00000540963 C20orf78Q9BR46 151 aa16.15■□□□□ 0.18
CHFR-218ENST00000540963 TIMM21Q9BVV7 248 aa16.15■□□□□ 0.18
CHFR-218ENST00000540963 TNFRSF6BO95407 300 aa16.14■□□□□ 0.17
CHFR-218ENST00000540963 KRTAP1-4P0C5Y4 121 aa16.14■□□□□ 0.17
CHFR-218ENST00000540963 TLX1NBP0CAT3 122 aa16.14■□□□□ 0.17
CHFR-218ENST00000540963 KIR2DL4Q99706 377 aa16.14■□□□□ 0.17
CHFR-218ENST00000540963 PPP1R2P9O14990 202 aa16.13■□□□□ 0.17
CHFR-218ENST00000540963 RPL13AP40429 203 aaKnown RBP16.13■□□□□ 0.17
CHFR-218ENST00000540963 RPL39P62891 51 aaKnown RBP16.13■□□□□ 0.17
CHFR-218ENST00000540963 KRTAP9-2Q9BYQ4 174 aa16.13■□□□□ 0.17
CHFR-218ENST00000540963 A0A1B0GW15 77 aa16.12■□□□□ 0.17
CHFR-218ENST00000540963 NPYP01303 97 aa16.12■□□□□ 0.17
CHFR-218ENST00000540963 CKS2P33552 79 aa16.12■□□□□ 0.17
CHFR-218ENST00000540963 D6R8Y8 96 aa16.11■□□□□ 0.17
CHFR-218ENST00000540963 PRR4Q16378 134 aa16.11■□□□□ 0.17
CHFR-218ENST00000540963 TMEM18Q96B42 140 aa16.11■□□□□ 0.17
CHFR-218ENST00000540963 NDUFA1O15239 70 aa16.1■□□□□ 0.17
CHFR-218ENST00000540963 KRTAP11-1Q8IUC1 163 aa16.1■□□□□ 0.17
CHFR-218ENST00000540963 UBE2D1P51668 147 aa16.09■□□□□ 0.17
CHFR-218ENST00000540963 HBBP68871 147 aa16.09■□□□□ 0.17
CHFR-218ENST00000540963 SMIM2Q9BVW6 85 aa16.09■□□□□ 0.17
CHFR-218ENST00000540963 ORAOV1Q8WV07 137 aa16.08■□□□□ 0.16
CHFR-218ENST00000540963 FAM168BA1KXE4 195 aa16.07■□□□□ 0.16
CHFR-218ENST00000540963 IGHV3OR16-9A0A0B4J2B5 98 aa16.06■□□□□ 0.16
CHFR-218ENST00000540963 TCAPO15273 167 aa16.06■□□□□ 0.16
CHFR-218ENST00000540963 CARHSP1Q9Y2V2 147 aaKnown RBP16.06■□□□□ 0.16
CHFR-218ENST00000540963 FAM19A5Q7Z5A7 132 aaPredicted RBP16.04■□□□□ 0.16
CHFR-218ENST00000540963 F8W036 122 aa16.02■□□□□ 0.16
CHFR-218ENST00000540963 C10orf25Q5T742 122 aa16.02■□□□□ 0.16
CHFR-218ENST00000540963 C6orf48Q9UBA6 75 aa16.02■□□□□ 0.16
CHFR-218ENST00000540963 S100A8P05109 93 aa16.01■□□□□ 0.15
CHFR-218ENST00000540963 MRPS36P82909 103 aaKnown RBP16.01■□□□□ 0.15
CHFR-218ENST00000540963 UNQ6190/PRO20217Q6UXQ8 127 aa16.01■□□□□ 0.15
CHFR-218ENST00000540963 M0QXV9 152 aa16■□□□□ 0.15
CHFR-218ENST00000540963 PPBPP02775 128 aa16■□□□□ 0.15
CHFR-218ENST00000540963 UBE2BP63146 152 aa16■□□□□ 0.15
CHFR-218ENST00000540963 TMEM136Q6ZRR5 245 aa16■□□□□ 0.15
CHFR-218ENST00000540963 KRTAP7-1Q8IUC3 87 aa16■□□□□ 0.15
CHFR-218ENST00000540963 GAGE2EQ4V326 116 aa15.99■□□□□ 0.15
CHFR-218ENST00000540963 ATP5L2Q7Z4Y8 100 aa15.99■□□□□ 0.15
CHFR-218ENST00000540963 SPANXA1Q9NS26 97 aa15.99■□□□□ 0.15
CHFR-218ENST00000540963 GAGE2DQ9UEU5 116 aa15.99■□□□□ 0.15
CHFR-218ENST00000540963 PRELID3AQ96N28 172 aa15.98■□□□□ 0.15
CHFR-218ENST00000540963 PRSS47A8MTI9 375 aa15.97■□□□□ 0.15
CHFR-218ENST00000540963 ORMDL3Q8N138 153 aa15.97■□□□□ 0.15
CHFR-218ENST00000540963 TRBV30A0A0K0K1B3 111 aa15.95■□□□□ 0.14
CHFR-218ENST00000540963 KIAA0087Q14695 138 aa15.93■□□□□ 0.14
CHFR-218ENST00000540963 LCE2AQ5TA79 106 aaPredicted RBP15.93■□□□□ 0.14
CHFR-218ENST00000540963 IGLV4-3A0A075B6K6 122 aa15.92■□□□□ 0.14
CHFR-218ENST00000540963 TGIF2-C20orf24A0A0A6YYL0 155 aa15.92■□□□□ 0.14
CHFR-218ENST00000540963 NDUFC2-KCTD14E9PQ53 114 aa15.92■□□□□ 0.14
CHFR-218ENST00000540963 ZNF861PO60384 105 aa15.92■□□□□ 0.14
CHFR-218ENST00000540963 PYGO1Q9Y3Y4 419 aa15.92■□□□□ 0.14
CHFR-218ENST00000540963 LOC389332A0A1B0GUA5 103 aa15.91■□□□□ 0.14
CHFR-218ENST00000540963 IFITM10A6NMD0 228 aa15.91■□□□□ 0.14
CHFR-218ENST00000540963 PNRC1Q12796 327 aaPredicted RBP15.9■□□□□ 0.14
CHFR-218ENST00000540963 LINC00242Q5T6M2 205 aa15.9■□□□□ 0.14
CHFR-218ENST00000540963 ZC2HC1BQ5TFG8 222 aa15.89■□□□□ 0.13
CHFR-218ENST00000540963 ANAPC16Q96DE5 110 aa15.89■□□□□ 0.13
CHFR-218ENST00000540963 NUPR1O60356 82 aa15.88■□□□□ 0.13
CHFR-218ENST00000540963 RAB5AP20339 215 aa15.88■□□□□ 0.13
CHFR-218ENST00000540963 C9orf129Q5T035 196 aaKnown RBP15.88■□□□□ 0.13
CHFR-218ENST00000540963 MT-ND4LP03901 98 aa15.87■□□□□ 0.13
CHFR-218ENST00000540963 PACRGQ96M98 296 aaPredicted RBP15.87■□□□□ 0.13
CHFR-218ENST00000540963 LINC00173Q6ZV60 143 aa15.86■□□□□ 0.13
CHFR-218ENST00000540963 Q8N8P6 123 aa15.86■□□□□ 0.13
CHFR-218ENST00000540963 LAMTOR2Q9Y2Q5 125 aa15.86■□□□□ 0.13
CHFR-218ENST00000540963 FAT4Q6V0I7 4981 aa15.86■□□□□ 0.13
CHFR-218ENST00000540963 ADCYAP1P18509 176 aa15.85■□□□□ 0.13
CHFR-218ENST00000540963 IFI27P40305 119 aaPredicted RBP15.85■□□□□ 0.13
CHFR-218ENST00000540963 CLLU1Q5K131 121 aa15.84■□□□□ 0.13
CHFR-218ENST00000540963 LINC01561Q8N1V8 128 aa15.84■□□□□ 0.13
CHFR-218ENST00000540963 TSPAN13O95857 204 aa15.83■□□□□ 0.12
CHFR-218ENST00000540963 RAB14P61106 215 aa15.83■□□□□ 0.12
CHFR-218ENST00000540963 TMEM141Q96I45 108 aa15.83■□□□□ 0.12
CHFR-218ENST00000540963 MAP1LC3AQ9H492 121 aa15.83■□□□□ 0.12
CHFR-218ENST00000540963 IFITM2Q01629 132 aa15.82■□□□□ 0.12
CHFR-218ENST00000540963 C2orf82Q6UX34 121 aa15.82■□□□□ 0.12
CHFR-218ENST00000540963 AMELXQ99217 191 aa15.82■□□□□ 0.12
CHFR-218ENST00000540963 C2orf66Q6UXQ4 117 aa15.81■□□□□ 0.12
CHFR-218ENST00000540963 KRTAP9-6A0A140TA67 174 aa15.8■□□□□ 0.12
CHFR-218ENST00000540963 IGIPA6NJ69 53 aa15.8■□□□□ 0.12
CHFR-218ENST00000540963 LBHQ53QV2 105 aaPredicted RBP15.8■□□□□ 0.12
CHFR-218ENST00000540963 CYSLTR1Q9Y271 337 aa15.78■□□□□ 0.12
CHFR-218ENST00000540963 C22orf24Q9Y442 160 aa15.78■□□□□ 0.12
CHFR-218ENST00000540963 A0A087X002 238 aa15.76■□□□□ 0.11
CHFR-218ENST00000540963 CRYGAP11844 174 aa15.76■□□□□ 0.11
CHFR-218ENST00000540963 RPL28P46779 137 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms