RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 H3BUT2 72 aa2.41□□□□□ -2.02
PRKDC-209ENST00000540819 Q96NJ1 140 aa2.41□□□□□ -2.02
PRKDC-209ENST00000540819 LRRC9Q6ZRR7 1453 aa2.4□□□□□ -2.02
PRKDC-209ENST00000540819 CTXND1A0A1B0GTU2 59 aa2.4□□□□□ -2.03
PRKDC-209ENST00000540819 CFDP00746 253 aaPredicted RBP2.4□□□□□ -2.03
PRKDC-209ENST00000540819 SCN11AQ9UI33 1791 aa2.4□□□□□ -2.03
PRKDC-209ENST00000540819 IFT172Q9UG01 1749 aa2.39□□□□□ -2.03
PRKDC-209ENST00000540819 RGPD2P0DJD1 1756 aa2.39□□□□□ -2.03
PRKDC-209ENST00000540819 NEXMIFQ5QGS0 1516 aa2.39□□□□□ -2.03
PRKDC-209ENST00000540819 UGGT2Q9NYU1 1516 aa2.39□□□□□ -2.03
PRKDC-209ENST00000540819 Q5BKY6 102 aa2.39□□□□□ -2.03
PRKDC-209ENST00000540819 C18orf32Q8TCD1 76 aa2.39□□□□□ -2.03
PRKDC-209ENST00000540819 ABCA1O95477 2261 aa2.38□□□□□ -2.03
PRKDC-209ENST00000540819 TRGV1A0A0A0MS02 117 aa2.38□□□□□ -2.03
PRKDC-209ENST00000540819 NUP188Q5SRE5 1749 aa2.38□□□□□ -2.03
PRKDC-209ENST00000540819 PSENENQ9NZ42 101 aa2.38□□□□□ -2.03
PRKDC-209ENST00000540819 ZNF236Q9UL36 1845 aa2.38□□□□□ -2.03
PRKDC-209ENST00000540819 MYO5CQ9NQX4 1742 aa2.37□□□□□ -2.03
PRKDC-209ENST00000540819 A0A1B0GWA3 101 aa2.37□□□□□ -2.03
PRKDC-209ENST00000540819 C7orf77A4D0Y5 90 aa2.37□□□□□ -2.03
PRKDC-209ENST00000540819 MGPP08493 103 aa2.37□□□□□ -2.03
PRKDC-209ENST00000540819 ARMS2P0C7Q2 107 aa2.37□□□□□ -2.03
PRKDC-209ENST00000540819 ZNF137PP52743 207 aa2.37□□□□□ -2.03
PRKDC-209ENST00000540819 SMIM4Q8WVI0 70 aa2.37□□□□□ -2.03
PRKDC-209ENST00000540819 IQGAP3Q86VI3 1631 aa2.37□□□□□ -2.03
PRKDC-209ENST00000540819 TMEM131LA2VDJ0 1609 aa2.36□□□□□ -2.03
PRKDC-209ENST00000540819 TRAV1-2A0A0B4J238 106 aa2.36□□□□□ -2.03
PRKDC-209ENST00000540819 TRBV30A0A0K0K1B3 111 aa2.36□□□□□ -2.03
PRKDC-209ENST00000540819 ACYP2P14621 99 aa2.36□□□□□ -2.03
PRKDC-209ENST00000540819 COX17Q14061 63 aa2.36□□□□□ -2.03
PRKDC-209ENST00000540819 LINC00575Q6W349 94 aa2.36□□□□□ -2.03
PRKDC-209ENST00000540819 ZCCHC13Q8WW36 166 aaKnown RBP2.36□□□□□ -2.03
PRKDC-209ENST00000540819 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
PRKDC-209ENST00000540819 RAPGEF6Q8TEU7 1601 aa2.35□□□□□ -2.03
PRKDC-209ENST00000540819 IQCF6A8MYZ5 107 aa2.35□□□□□ -2.03
PRKDC-209ENST00000540819 CUX1P39880 1505 aa2.35□□□□□ -2.03
PRKDC-209ENST00000540819 ZMYM4Q5VZL5 1548 aa2.34□□□□□ -2.03
PRKDC-209ENST00000540819 MYMXA0A1B0GTQ4 84 aa2.34□□□□□ -2.03
PRKDC-209ENST00000540819 M0R3E3 92 aa2.34□□□□□ -2.03
PRKDC-209ENST00000540819 NCR3O14931 201 aa2.34□□□□□ -2.03
PRKDC-209ENST00000540819 KRTAP10-10P60014 251 aa2.34□□□□□ -2.03
PRKDC-209ENST00000540819 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
PRKDC-209ENST00000540819 DNAJC13O75165 2243 aa2.34□□□□□ -2.04
PRKDC-209ENST00000540819 CACNA1BQ00975 2339 aa2.34□□□□□ -2.04
PRKDC-209ENST00000540819 LEPROTL1O95214 131 aa2.33□□□□□ -2.04
PRKDC-209ENST00000540819 SPRR4Q96PI1 79 aa2.33□□□□□ -2.04
PRKDC-209ENST00000540819 LINC00846Q9NV44 126 aa2.33□□□□□ -2.04
PRKDC-209ENST00000540819 COL4A1P02462 1669 aa2.33□□□□□ -2.04
PRKDC-209ENST00000540819 KDM3BQ7LBC6 1761 aa2.33□□□□□ -2.04
PRKDC-209ENST00000540819 ANKRD36A6QL64 1941 aa2.32□□□□□ -2.04
PRKDC-209ENST00000540819 CRYBG1Q9Y4K1 1723 aa2.32□□□□□ -2.04
PRKDC-209ENST00000540819 A0A096LNT2 108 aa2.32□□□□□ -2.04
PRKDC-209ENST00000540819 D6R8Y8 96 aa2.32□□□□□ -2.04
PRKDC-209ENST00000540819 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
PRKDC-209ENST00000540819 PLGLAQ15195 96 aa2.32□□□□□ -2.04
PRKDC-209ENST00000540819 MUSTN1Q8IVN3 82 aa2.32□□□□□ -2.04
PRKDC-209ENST00000540819 F5P12259 2224 aa2.32□□□□□ -2.04
PRKDC-209ENST00000540819 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.31□□□□□ -2.04
PRKDC-209ENST00000540819 MYO7AQ13402 2215 aa2.31□□□□□ -2.04
PRKDC-209ENST00000540819 MROH1Q8NDA8 1641 aa2.31□□□□□ -2.04
PRKDC-209ENST00000540819 SHPRHQ149N8 1683 aa2.31□□□□□ -2.04
PRKDC-209ENST00000540819 KNDC1Q76NI1 1749 aa2.31□□□□□ -2.04
PRKDC-209ENST00000540819 CEBPZOSA8MTT3 80 aa2.3□□□□□ -2.04
PRKDC-209ENST00000540819 SMIM13P0DJ93 91 aa2.3□□□□□ -2.04
PRKDC-209ENST00000540819 SPINK13Q1W4C9 94 aa2.3□□□□□ -2.04
PRKDC-209ENST00000540819 DEFB121Q5J5C9 76 aa2.3□□□□□ -2.04
PRKDC-209ENST00000540819 HEPN1Q6WQI6 88 aa2.3□□□□□ -2.04
PRKDC-209ENST00000540819 LRRC37A2A6NM11 1700 aa2.3□□□□□ -2.04
PRKDC-209ENST00000540819 ARFGEF2Q9Y6D5 1785 aa2.3□□□□□ -2.04
PRKDC-209ENST00000540819 CACNA1CQ13936 2221 aa2.29□□□□□ -2.04
PRKDC-209ENST00000540819 DUOX2Q9NRD8 1548 aa2.29□□□□□ -2.04
PRKDC-209ENST00000540819 A0A087WVE0 104 aa2.29□□□□□ -2.04
PRKDC-209ENST00000540819 SMIM11BQ8TCY0 68 aa2.29□□□□□ -2.04
PRKDC-209ENST00000540819 TECTAO75443 2155 aa2.29□□□□□ -2.04
PRKDC-209ENST00000540819 LINC00472Q9H8W2 130 aa2.28□□□□□ -2.04
PRKDC-209ENST00000540819 INO80Q9ULG1 1556 aaPredicted RBP2.27□□□□□ -2.05
PRKDC-209ENST00000540819 MAGI3Q5TCQ9 1506 aa2.27□□□□□ -2.05
PRKDC-209ENST00000540819 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
PRKDC-209ENST00000540819 FDCSPQ8NFU4 85 aa2.27□□□□□ -2.05
PRKDC-209ENST00000540819 TMEM263Q8WUH6 116 aaKnown RBP2.27□□□□□ -2.05
PRKDC-209ENST00000540819 PLAC4Q8WY50 150 aa2.27□□□□□ -2.05
PRKDC-209ENST00000540819 SPINT3P49223 89 aa2.26□□□□□ -2.05
PRKDC-209ENST00000540819 DEFB119Q8N690 84 aa2.26□□□□□ -2.05
PRKDC-209ENST00000540819 PLAC8Q9NZF1 115 aa2.26□□□□□ -2.05
PRKDC-209ENST00000540819 UBE2D4Q9Y2X8 147 aa2.26□□□□□ -2.05
PRKDC-209ENST00000540819 ALKQ9UM73 1620 aa2.26□□□□□ -2.05
PRKDC-209ENST00000540819 SETBP1Q9Y6X0 1596 aa2.26□□□□□ -2.05
PRKDC-209ENST00000540819 FLG2Q5D862 2391 aaPredicted RBP2.25□□□□□ -2.05
PRKDC-209ENST00000540819 C5P01031 1676 aa2.25□□□□□ -2.05
PRKDC-209ENST00000540819 GVQW2A0A096LPI5 108 aaPredicted RBP2.25□□□□□ -2.05
PRKDC-209ENST00000540819 UMAD1C9J7I0 102 aa2.25□□□□□ -2.05
PRKDC-209ENST00000540819 S100ZQ8WXG8 99 aa2.25□□□□□ -2.05
PRKDC-209ENST00000540819 RGPD1P0DJD0 1748 aa2.25□□□□□ -2.05
PRKDC-209ENST00000540819 Q6JHZ5 121 aa2.24□□□□□ -2.05
PRKDC-209ENST00000540819 Q6ZRX8 168 aa2.24□□□□□ -2.05
PRKDC-209ENST00000540819 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
PRKDC-209ENST00000540819 TARBP1Q13395 1621 aaKnown RBP2.23□□□□□ -2.05
PRKDC-209ENST00000540819 TRIOBPQ9H2D6 2365 aa2.22□□□□□ -2.05
PRKDC-209ENST00000540819 H0Y9P7 68 aa2.22□□□□□ -2.05
PRKDC-209ENST00000540819 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms