RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 DEFB107AQ8IZN7 70 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 SPRR4Q96PI1 79 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 TRGV9Q99603 122 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 FXYD6Q9H0Q3 95 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 U3KQA8 63 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 SBF2Q86WG5 1849 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 JMJD1CQ15652 2540 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 CC2D2AQ9P2K1 1620 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 BTAF1O14981 1849 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 PLXNB2O15031 1838 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 KDM3BQ7LBC6 1761 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 HMGXB3Q12766 1538 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 ZFYVE16Q7Z3T8 1539 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 TRBV25-1A0A075B6N4 114 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 TRBV7-4A0A0J9YYF1 115 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 H3BQF6 201 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 SYS1-DBNDD2H3BUS1 97 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 WFDC2Q14508 124 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 ZNF720Q7Z2F6 126 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 SERP2Q8N6R1 65 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 NAV3Q8IVL0 2385 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 NSD3Q9BZ95 1437 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 KMT2DO14686 5537 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 TOP2BQ02880 1626 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 RAPGEF6Q8TEU7 1601 aa0.2□□□□□ -2.38
MDM2-227ENST00000540709 ANKRD36BQ8N2N9 1353 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 APCP25054 2843 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 EHBP1L1Q8N3D4 1523 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 ARHGEF12Q9NZN5 1544 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 SPHKAPQ2M3C7 1700 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 MLH3Q9UHC1 1453 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 A0A1B0GU69 56 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 D6R8Y8 96 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 I3L2K1 104 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 LEPROTL1O95214 131 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 COX6B1P14854 86 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 SMIM11AP58511 58 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 ETDBQ3ZM63 59 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 MUSTN1Q8IVN3 82 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 SNHG12Q9BXW3 62 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 LINC00846Q9NV44 126 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 ASXL3Q9C0F0 2248 aa0.19□□□□□ -2.38
MDM2-227ENST00000540709 CACNA1CQ13936 2221 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 TET3O43151 1660 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 MYOM1P52179 1685 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 ADGRL2O95490 1459 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 C1orf167Q5SNV9 1468 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 TTC28Q96AY4 2481 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 LINC00959A0A1B0GUT2 108 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 H0Y9P7 68 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 H7BZZ5 65 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 GYPAP02724 150 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 ARMS2P0C7Q2 107 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 SPRR1AP35321 89 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 C6orf201Q7Z4U5 140 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 USMG5Q96IX5 58 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 ABCA3Q99758 1704 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 CACNA1EQ15878 2313 aa0.18□□□□□ -2.38
MDM2-227ENST00000540709 TEX14Q8IWB6 1497 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 MAGI1Q96QZ7 1491 aaPredicted RBP0.17□□□□□ -2.38
MDM2-227ENST00000540709 FYCO1Q9BQS8 1478 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 NHSL1Q5SYE7 1610 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 F8WEM9 126 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 SPINK4O60575 86 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 COX8AP10176 69 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 SPRR1BP22528 89 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 ARHGEF5Q12774 1597 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 PEA15Q15121 130 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 HMGN3Q15651 99 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 Q5VSD8 79 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 PSENENQ9NZ42 101 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 CRIPTQ9P021 101 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 APLNQ9ULZ1 77 aa0.17□□□□□ -2.38
MDM2-227ENST00000540709 SHROOM2Q13796 1616 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 GAPVD1Q14C86 1478 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 ABCC10Q5T3U5 1492 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 PLEKHH2Q8IVE3 1493 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 NLRP1Q9C000 1473 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 MRC2Q9UBG0 1479 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 PDCD11Q14690 1871 aaKnown RBP0.16□□□□□ -2.38
MDM2-227ENST00000540709 SETBP1Q9Y6X0 1596 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 CACNA1HO95180 2353 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 TPRP12270 2363 aaKnown RBP0.16□□□□□ -2.38
MDM2-227ENST00000540709 TRBV7-7A0A0K0K1E9 115 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 CPSF4LA6NMK7 179 aaKnown RBP0.16□□□□□ -2.38
MDM2-227ENST00000540709 LOC730098B7Z3J9 87 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 I3L3M4 83 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 ALKAL2Q6UX46 152 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 DEFB105AQ8NG35 78 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 V9GYS6 101 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 PRDM15P57071 1507 aaPredicted RBP0.16□□□□□ -2.38
MDM2-227ENST00000540709 CCNB3Q8WWL7 1395 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 PAPPAQ13219 1627 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 BIVM-ERCC5R4GMW8 1640 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 RAPGEF2Q9Y4G8 1499 aa0.16□□□□□ -2.38
MDM2-227ENST00000540709 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
MDM2-227ENST00000540709 SCN7AQ01118 1682 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 TOPAZ1Q8N9V7 1692 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 VPS8Q8N3P4 1428 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 AHCTF1Q8WYP5 2266 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms