RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 DAZ2Q13117 558 aaKnown RBP7.12□□□□□ -1.27
PHC1-208ENST00000540574 DAZ4Q86SG3 579 aaKnown RBP7.12□□□□□ -1.27
PHC1-208ENST00000540574 DAZ3Q9NR90 486 aaKnown RBP7.12□□□□□ -1.27
PHC1-208ENST00000540574 ZFAND6Q6FIF0 208 aa7.12□□□□□ -1.27
PHC1-208ENST00000540574 LINC00526Q96FQ7 95 aa7.12□□□□□ -1.27
PHC1-208ENST00000540574 TRAV26-1A0A087WT03 109 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 RPL32P62910 135 aaKnown RBP7.11□□□□□ -1.27
PHC1-208ENST00000540574 MIAQ16674 131 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 GAGE2AQ6NT46 116 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 ATP6V0E2Q8NHE4 81 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 COPS9Q8WXC6 57 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 STAB1Q9NY15 2570 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 ATP5G1P05496 136 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 KLK9Q2XQG4 91 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 SS18Q15532 418 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 RNF152Q8N8N0 203 aa7.11□□□□□ -1.27
PHC1-208ENST00000540574 TRAV4A0A0B4J268 109 aa7.1□□□□□ -1.27
PHC1-208ENST00000540574 CMC4P56277 68 aaPredicted RBP7.1□□□□□ -1.27
PHC1-208ENST00000540574 LINC00242Q5T6M2 205 aa7.1□□□□□ -1.27
PHC1-208ENST00000540574 SND1-IT1Q9HBX3 110 aa7.1□□□□□ -1.27
PHC1-208ENST00000540574 MRPS36P82909 103 aaKnown RBP7.1□□□□□ -1.27
PHC1-208ENST00000540574 LRRC75A-AS1Q8N1F1 130 aa7.1□□□□□ -1.27
PHC1-208ENST00000540574 FAM222AQ5U5X8 452 aa7.1□□□□□ -1.27
PHC1-208ENST00000540574 C15orf53Q8NAA6 179 aa7.1□□□□□ -1.27
PHC1-208ENST00000540574 TRAV25A0A0B4J276 109 aa7.09□□□□□ -1.27
PHC1-208ENST00000540574 A0A096LNT2 108 aa7.09□□□□□ -1.27
PHC1-208ENST00000540574 C11orf72Q8NBR9 251 aa7.09□□□□□ -1.27
PHC1-208ENST00000540574 COX7B2Q8TF08 81 aa7.09□□□□□ -1.27
PHC1-208ENST00000540574 PYGO1Q9Y3Y4 419 aa7.09□□□□□ -1.27
PHC1-208ENST00000540574 TMEM86BQ8N661 226 aa7.09□□□□□ -1.27
PHC1-208ENST00000540574 C3orf56Q8N813 242 aa7.09□□□□□ -1.27
PHC1-208ENST00000540574 IGLV4-60A0A075B6I1 120 aa7.08□□□□□ -1.28
PHC1-208ENST00000540574 S100A7L2Q5SY68 101 aa7.08□□□□□ -1.28
PHC1-208ENST00000540574 LINC00308Q8TCZ7 52 aa7.08□□□□□ -1.28
PHC1-208ENST00000540574 HIVEP1P15822 2718 aa7.08□□□□□ -1.28
PHC1-208ENST00000540574 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
PHC1-208ENST00000540574 CR1P17927 2039 aa7.08□□□□□ -1.28
PHC1-208ENST00000540574 COL6A5A8TX70 2615 aa7.08□□□□□ -1.28
PHC1-208ENST00000540574 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
PHC1-208ENST00000540574 BAALC-AS2P0C853 105 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 TRBV10-1A0A0K0K1A3 114 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 LINC00269Q8N2A0 174 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 A0A0B4J2C4 111 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 LY6G6DO95868 133 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 XGP55808 180 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 NTM-AS1Q6ZSK4 140 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 AMELXQ99217 191 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 NBPF19A0A087WUL8 3843 aa7.07□□□□□ -1.28
PHC1-208ENST00000540574 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.06□□□□□ -1.28
PHC1-208ENST00000540574 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
PHC1-208ENST00000540574 SLPIP03973 132 aa7.06□□□□□ -1.28
PHC1-208ENST00000540574 CDC42SE2Q9NRR3 84 aa7.06□□□□□ -1.28
PHC1-208ENST00000540574 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
PHC1-208ENST00000540574 UBE2D3P61077 147 aa7.05□□□□□ -1.28
PHC1-208ENST00000540574 UBE2D2P62837 147 aa7.05□□□□□ -1.28
PHC1-208ENST00000540574 KLK12Q9UKR0 248 aa7.05□□□□□ -1.28
PHC1-208ENST00000540574 TRBV6-8A0A0A6YYG3 113 aa7.05□□□□□ -1.28
PHC1-208ENST00000540574 IFITM1P13164 125 aa7.05□□□□□ -1.28
PHC1-208ENST00000540574 SMIM1B2RUZ4 78 aa7.04□□□□□ -1.28
PHC1-208ENST00000540574 LECT2O14960 151 aa7.04□□□□□ -1.28
PHC1-208ENST00000540574 NDUFA1O15239 70 aa7.04□□□□□ -1.28
PHC1-208ENST00000540574 CRYBA4P53673 196 aa7.04□□□□□ -1.28
PHC1-208ENST00000540574 DEFB121Q5J5C9 76 aa7.03□□□□□ -1.28
PHC1-208ENST00000540574 MRAPQ8TCY5 172 aa7.03□□□□□ -1.28
PHC1-208ENST00000540574 FSHBP01225 129 aa7.03□□□□□ -1.28
PHC1-208ENST00000540574 IGLV1-51P01701 117 aa7.03□□□□□ -1.28
PHC1-208ENST00000540574 PRR3P79522 188 aaKnown RBP7.03□□□□□ -1.28
PHC1-208ENST00000540574 EDA2RQ9HAV5 297 aa7.03□□□□□ -1.28
PHC1-208ENST00000540574 PRO0255Q9UI72 69 aa7.03□□□□□ -1.28
PHC1-208ENST00000540574 SCGB1A1P11684 91 aa7.03□□□□□ -1.28
PHC1-208ENST00000540574 PRO0461Q9UI25 63 aa7.03□□□□□ -1.28
PHC1-208ENST00000540574 B5MCH6 92 aa7.02□□□□□ -1.28
PHC1-208ENST00000540574 TIRAPP58753 221 aa7.02□□□□□ -1.28
PHC1-208ENST00000540574 NCR3O14931 201 aa7.02□□□□□ -1.29
PHC1-208ENST00000540574 HILS1P60008 231 aa7.02□□□□□ -1.29
PHC1-208ENST00000540574 HIST1H4AP62805 103 aaKnown RBP7.02□□□□□ -1.29
PHC1-208ENST00000540574 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.29
PHC1-208ENST00000540574 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
PHC1-208ENST00000540574 C9orf116Q5BN46 136 aaPredicted RBP7.02□□□□□ -1.29
PHC1-208ENST00000540574 H7C423 109 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 Q8N2B8 174 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 HERV-K104P63124 156 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 Q8N3U1 123 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 LAMTOR3Q9UHA4 124 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 TRBV30A0A0K0K1B3 111 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 TRBV6-4A0A1B0GX49 114 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 APOC4P55056 127 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 C9orf66Q5T8R8 295 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 OXLD1Q5BKU9 147 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 RNF183Q96D59 192 aa7.01□□□□□ -1.29
PHC1-208ENST00000540574 COX7A2LO14548 114 aa7□□□□□ -1.29
PHC1-208ENST00000540574 PRB2P02812 416 aaPredicted RBP7□□□□□ -1.29
PHC1-208ENST00000540574 FHL2Q14192 279 aa7□□□□□ -1.29
PHC1-208ENST00000540574 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
PHC1-208ENST00000540574 IGKV3D-7A0A0C4DH55 119 aa6.99□□□□□ -1.29
PHC1-208ENST00000540574 SPANXDQ9BXN6 97 aa6.99□□□□□ -1.29
PHC1-208ENST00000540574 SPANXCQ9NY87 97 aa6.99□□□□□ -1.29
PHC1-208ENST00000540574 HIGD2BQ4VC39 106 aa6.99□□□□□ -1.29
PHC1-208ENST00000540574 IGHV4-28A0A0C4DH34 117 aa6.99□□□□□ -1.29
PHC1-208ENST00000540574 LINC00959A0A1B0GUT2 108 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms