RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 FAM222AQ5U5X8 452 aa7.95□□□□□ -1.14
PBX1-212ENST00000540236 FAM19A3Q7Z5A8 133 aa7.95□□□□□ -1.14
PBX1-212ENST00000540236 COL4A2P08572 1712 aa7.95□□□□□ -1.14
PBX1-212ENST00000540236 IGHV4-38-2P0DP08 117 aa7.95□□□□□ -1.14
PBX1-212ENST00000540236 PLAC8L1A1L4L8 177 aa7.95□□□□□ -1.14
PBX1-212ENST00000540236 H7BZZ5 65 aa7.94□□□□□ -1.14
PBX1-212ENST00000540236 CCL19Q99731 98 aa7.94□□□□□ -1.14
PBX1-212ENST00000540236 AKAP6Q13023 2319 aa7.94□□□□□ -1.14
PBX1-212ENST00000540236 MALRD1Q5VYJ5 2156 aa7.94□□□□□ -1.14
PBX1-212ENST00000540236 NDUFS5O43920 106 aa7.94□□□□□ -1.14
PBX1-212ENST00000540236 COX8CQ7Z4L0 72 aa7.94□□□□□ -1.14
PBX1-212ENST00000540236 TRIOO75962 3097 aa7.94□□□□□ -1.14
PBX1-212ENST00000540236 WDFY4Q6ZS81 3184 aa7.94□□□□□ -1.14
PBX1-212ENST00000540236 LINC00315P59091 139 aa7.93□□□□□ -1.14
PBX1-212ENST00000540236 Q8N6K4 173 aa7.93□□□□□ -1.14
PBX1-212ENST00000540236 WFDC13Q8IUB5 93 aa7.93□□□□□ -1.14
PBX1-212ENST00000540236 C1orf158Q8N1D5 194 aa7.93□□□□□ -1.14
PBX1-212ENST00000540236 KIF25-AS1Q9Y6Z4 181 aa7.93□□□□□ -1.14
PBX1-212ENST00000540236 CACNA1EQ15878 2313 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 UBE2AP49459 152 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 ZNF575Q86XF7 245 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 XAGE1AQ9HD64 81 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 UBE2BP63146 152 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 NTM-AS1Q6ZSK4 140 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 SORL1Q92673 2214 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 ZNF561-AS1K7EIQ3 104 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 LYPD5Q6UWN5 251 aa7.92□□□□□ -1.14
PBX1-212ENST00000540236 REV3LO60673 3130 aa7.91□□□□□ -1.14
PBX1-212ENST00000540236 HTTP42858 3142 aa7.91□□□□□ -1.14
PBX1-212ENST00000540236 DEFB4AO15263 64 aa7.91□□□□□ -1.14
PBX1-212ENST00000540236 FP248Q71RG6 208 aaPredicted RBP7.9□□□□□ -1.14
PBX1-212ENST00000540236 WNK2Q9Y3S1 2297 aa7.9□□□□□ -1.15
PBX1-212ENST00000540236 SMIM29Q86T20 159 aa7.89□□□□□ -1.15
PBX1-212ENST00000540236 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
PBX1-212ENST00000540236 A8MUN3 132 aa7.89□□□□□ -1.15
PBX1-212ENST00000540236 KLLNB2CW77 178 aa7.89□□□□□ -1.15
PBX1-212ENST00000540236 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.89□□□□□ -1.15
PBX1-212ENST00000540236 BBC3Q96PG8 261 aaPredicted RBP7.89□□□□□ -1.15
PBX1-212ENST00000540236 IGHV4-59P01825 116 aa7.89□□□□□ -1.15
PBX1-212ENST00000540236 GYPEP15421 78 aa7.89□□□□□ -1.15
PBX1-212ENST00000540236 ODF3BA8MYP8 253 aa7.89□□□□□ -1.15
PBX1-212ENST00000540236 MP68P56378 58 aa7.89□□□□□ -1.15
PBX1-212ENST00000540236 COX7BP24311 80 aa7.88□□□□□ -1.15
PBX1-212ENST00000540236 IGKV2-28A0A075B6P5 120 aa7.88□□□□□ -1.15
PBX1-212ENST00000540236 IGKV2D-28P01615 120 aa7.88□□□□□ -1.15
PBX1-212ENST00000540236 MAP1BP46821 2468 aaKnown RBP7.88□□□□□ -1.15
PBX1-212ENST00000540236 DEFB123Q8N688 67 aa7.88□□□□□ -1.15
PBX1-212ENST00000540236 PLA2G2AP14555 144 aa7.87□□□□□ -1.15
PBX1-212ENST00000540236 KLK12Q9UKR0 248 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 IGLV4-60A0A075B6I1 120 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 M0R2N4 97 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 C18orf65Q6ZTR6 163 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 TRBV6-4A0A1B0GX49 114 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 IBA57-AS1B1ANH7 110 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 MDFIQ99750 246 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
PBX1-212ENST00000540236 CDC42SE2Q9NRR3 84 aa7.85□□□□□ -1.15
PBX1-212ENST00000540236 LAMA1P25391 3075 aa7.85□□□□□ -1.15
PBX1-212ENST00000540236 LINC01006Q8NI28 216 aa7.85□□□□□ -1.15
PBX1-212ENST00000540236 LINC00575Q6W349 94 aa7.84□□□□□ -1.15
PBX1-212ENST00000540236 C6orf223Q8N319 242 aa7.83□□□□□ -1.16
PBX1-212ENST00000540236 APC2O95996 2303 aa7.83□□□□□ -1.16
PBX1-212ENST00000540236 IGHV4-30-4P0DP06 118 aa7.83□□□□□ -1.16
PBX1-212ENST00000540236 IGHV4-31P0DP07 118 aa7.83□□□□□ -1.16
PBX1-212ENST00000540236 AVPP01185 164 aa7.83□□□□□ -1.16
PBX1-212ENST00000540236 C4orf48Q5BLP8 95 aa7.82□□□□□ -1.16
PBX1-212ENST00000540236 APOC4P55056 127 aa7.82□□□□□ -1.16
PBX1-212ENST00000540236 NCOR1O75376 2440 aa7.82□□□□□ -1.16
PBX1-212ENST00000540236 CD164Q04900 197 aa7.82□□□□□ -1.16
PBX1-212ENST00000540236 FSHBP01225 129 aa7.81□□□□□ -1.16
PBX1-212ENST00000540236 ZFHX4Q86UP3 3567 aa7.81□□□□□ -1.16
PBX1-212ENST00000540236 HCG22E2RYF7 251 aa7.81□□□□□ -1.16
PBX1-212ENST00000540236 SPAG11BQ08648 103 aa7.81□□□□□ -1.16
PBX1-212ENST00000540236 SPATA3Q8NHX4 192 aa7.81□□□□□ -1.16
PBX1-212ENST00000540236 Q6ZQT0 140 aa7.8□□□□□ -1.16
PBX1-212ENST00000540236 LINC00208Q96KT6 92 aa7.8□□□□□ -1.16
PBX1-212ENST00000540236 MAP6D1Q9H9H5 199 aa7.8□□□□□ -1.16
PBX1-212ENST00000540236 CHD7Q9P2D1 2997 aa7.8□□□□□ -1.16
PBX1-212ENST00000540236 CHCHD10Q8WYQ3 142 aaPredicted RBP7.79□□□□□ -1.16
PBX1-212ENST00000540236 DEFB112Q30KQ8 113 aa7.79□□□□□ -1.16
PBX1-212ENST00000540236 CACNA1BQ00975 2339 aa7.79□□□□□ -1.16
PBX1-212ENST00000540236 LINC00959A0A1B0GUT2 108 aa7.79□□□□□ -1.16
PBX1-212ENST00000540236 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
PBX1-212ENST00000540236 SERTAD4-AS1Q5TG53 156 aa7.79□□□□□ -1.16
PBX1-212ENST00000540236 A0A096LNI7 61 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 K7EQG2 157 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 CAMK2N2Q96S95 79 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 WFDC10AQ9H1F0 79 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 COL6A6A6NMZ7 2263 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 ABCA4P78363 2273 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 H0Y9J4 135 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 MUC7Q8TAX7 377 aa7.78□□□□□ -1.16
PBX1-212ENST00000540236 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
PBX1-212ENST00000540236 H3BS24 57 aa7.77□□□□□ -1.17
PBX1-212ENST00000540236 C1orf64Q8NEQ6 169 aa7.77□□□□□ -1.17
PBX1-212ENST00000540236 TRBV10-3A0A0K0K1G6 114 aa7.77□□□□□ -1.17
PBX1-212ENST00000540236 CSMD1Q96PZ7 3565 aa7.77□□□□□ -1.17
PBX1-212ENST00000540236 DOPEY2Q9Y3R5 2298 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms