RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 RPL32P62910 135 aaKnown RBP7.36□□□□□ -1.23
TRAF1-202ENST00000540010 ITPR3Q14573 2671 aa7.35□□□□□ -1.23
TRAF1-202ENST00000540010 Q6ZSV7 163 aa7.35□□□□□ -1.23
TRAF1-202ENST00000540010 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
TRAF1-202ENST00000540010 MUC4Q99102 2169 aa7.35□□□□□ -1.23
TRAF1-202ENST00000540010 CSMD2Q7Z408 3487 aa7.35□□□□□ -1.23
TRAF1-202ENST00000540010 DEFB105AQ8NG35 78 aa7.35□□□□□ -1.23
TRAF1-202ENST00000540010 RNF152Q8N8N0 203 aa7.35□□□□□ -1.23
TRAF1-202ENST00000540010 VPS13CQ709C8 3753 aa7.34□□□□□ -1.23
TRAF1-202ENST00000540010 RBMY1FQ15415 496 aaKnown RBP7.34□□□□□ -1.23
TRAF1-202ENST00000540010 CITED2Q99967 270 aaPredicted RBP7.34□□□□□ -1.23
TRAF1-202ENST00000540010 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
TRAF1-202ENST00000540010 DCANP1Q8TF63 244 aa7.33□□□□□ -1.24
TRAF1-202ENST00000540010 CRYGDP07320 174 aa7.33□□□□□ -1.24
TRAF1-202ENST00000540010 C4orf3Q8WVX3 66 aa7.33□□□□□ -1.24
TRAF1-202ENST00000540010 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
TRAF1-202ENST00000540010 HECTD1Q9ULT8 2610 aa7.33□□□□□ -1.24
TRAF1-202ENST00000540010 COX7A2LO14548 114 aa7.33□□□□□ -1.24
TRAF1-202ENST00000540010 ZMAT4Q9H898 229 aa7.33□□□□□ -1.24
TRAF1-202ENST00000540010 SLPIP03973 132 aa7.32□□□□□ -1.24
TRAF1-202ENST00000540010 LINC00308Q8TCZ7 52 aa7.32□□□□□ -1.24
TRAF1-202ENST00000540010 TSHBP01222 138 aa7.32□□□□□ -1.24
TRAF1-202ENST00000540010 RBM3P98179 157 aaKnown RBP7.32□□□□□ -1.24
TRAF1-202ENST00000540010 NCR3O14931 201 aa7.32□□□□□ -1.24
TRAF1-202ENST00000540010 F8WEM9 126 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 SDIM1Q6ZPB5 146 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 KLLNB2CW77 178 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 ATOX1O00244 68 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 DEFB135Q30KP9 77 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 LINC00643Q86TS7 51 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 Q8N2B8 174 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 CLUHP3Q96NS8 147 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 IGKV2D-24A0A075B6R9 120 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 IGHV4-28A0A0C4DH34 117 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 IGIPA6NJ69 53 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 PSCAO43653 123 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 TMEM263Q8WUH6 116 aaKnown RBP7.31□□□□□ -1.24
TRAF1-202ENST00000540010 SMR3AQ99954 134 aa7.31□□□□□ -1.24
TRAF1-202ENST00000540010 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 TRBV30A0A0K0K1B3 111 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 POM121L12Q8N7R1 296 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 SPATA25Q9BR10 227 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 KLK12Q9UKR0 248 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 TRBV6-5A0A0K0K1A5 114 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 APOC4P55056 127 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 SPANXDQ9BXN6 97 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 hADV29S1A0JD25 119 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
TRAF1-202ENST00000540010 TSPEAR-AS2P59090 65 aa7.29□□□□□ -1.24
TRAF1-202ENST00000540010 CAMK2N2Q96S95 79 aa7.29□□□□□ -1.24
TRAF1-202ENST00000540010 TRAV23DV6A0A075B6W5 121 aa7.29□□□□□ -1.24
TRAF1-202ENST00000540010 DEFB114Q30KQ6 69 aa7.29□□□□□ -1.24
TRAF1-202ENST00000540010 NDUFA7O95182 113 aa7.28□□□□□ -1.24
TRAF1-202ENST00000540010 ODF3Q96PU9 254 aa7.28□□□□□ -1.24
TRAF1-202ENST00000540010 UNC79Q9P2D8 2635 aa7.28□□□□□ -1.24
TRAF1-202ENST00000540010 PRB2P02812 416 aaPredicted RBP7.28□□□□□ -1.24
TRAF1-202ENST00000540010 MXRA5Q9NR99 2828 aa7.28□□□□□ -1.24
TRAF1-202ENST00000540010 UBE2D1P51668 147 aa7.28□□□□□ -1.24
TRAF1-202ENST00000540010 UBE2DNLQ8IWF7 75 aa7.28□□□□□ -1.24
TRAF1-202ENST00000540010 ITPR2Q14571 2701 aa7.27□□□□□ -1.25
TRAF1-202ENST00000540010 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
TRAF1-202ENST00000540010 LINC01006Q8NI28 216 aa7.27□□□□□ -1.25
TRAF1-202ENST00000540010 IGLV2-18A0A075B6J9 118 aa7.27□□□□□ -1.25
TRAF1-202ENST00000540010 CCDC179H3BU77 68 aa7.27□□□□□ -1.25
TRAF1-202ENST00000540010 RPL18AQ02543 176 aaKnown RBP7.27□□□□□ -1.25
TRAF1-202ENST00000540010 LINC00269Q8N2A0 174 aa7.26□□□□□ -1.25
TRAF1-202ENST00000540010 IGLV4-69A0A075B6H9 119 aa7.26□□□□□ -1.25
TRAF1-202ENST00000540010 WFDC10AQ9H1F0 79 aa7.26□□□□□ -1.25
TRAF1-202ENST00000540010 JMJD7-PLA2G4BH0Y9G9 81 aa7.26□□□□□ -1.25
TRAF1-202ENST00000540010 C9orf85Q96MD7 179 aa7.26□□□□□ -1.25
TRAF1-202ENST00000540010 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
TRAF1-202ENST00000540010 PYGO1Q9Y3Y4 419 aa7.26□□□□□ -1.25
TRAF1-202ENST00000540010 F8P00451 2351 aa7.26□□□□□ -1.25
TRAF1-202ENST00000540010 NDUFA1O15239 70 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 LY6G6DO95868 133 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 KRTAP1-1Q07627 177 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 PRO0255Q9UI72 69 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 LOC100131303A0A0U1RQF7 123 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 H7C423 109 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 MRAPQ8TCY5 172 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 FAM19A4Q96LR4 140 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 LST1O00453 97 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 UBE2D4Q9Y2X8 147 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 SPART-AS1P0CW21 52 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 HILS1P60008 231 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 ZNF575Q86XF7 245 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 C20orf197Q8N268 126 aa7.25□□□□□ -1.25
TRAF1-202ENST00000540010 LINC00526Q96FQ7 95 aa7.24□□□□□ -1.25
TRAF1-202ENST00000540010 TIRAPP58753 221 aa7.24□□□□□ -1.25
TRAF1-202ENST00000540010 TMEM256-PLSCR3K7ERE1 68 aa7.24□□□□□ -1.25
TRAF1-202ENST00000540010 KMT2BQ9UMN6 2715 aaPredicted RBP7.24□□□□□ -1.25
TRAF1-202ENST00000540010 J3KT08 172 aa7.23□□□□□ -1.25
TRAF1-202ENST00000540010 MRPS36P82909 103 aaKnown RBP7.23□□□□□ -1.25
TRAF1-202ENST00000540010 ADAMTSL4-AS1Q5T5F5 129 aa7.23□□□□□ -1.25
TRAF1-202ENST00000540010 XAGE1AQ9HD64 81 aa7.23□□□□□ -1.25
TRAF1-202ENST00000540010 ZFHX3Q15911 3703 aa7.23□□□□□ -1.25
TRAF1-202ENST00000540010 UBE2D3P61077 147 aa7.23□□□□□ -1.25
TRAF1-202ENST00000540010 UBE2D2P62837 147 aa7.23□□□□□ -1.25
TRAF1-202ENST00000540010 FAM222AQ5U5X8 452 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms