RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 LOC107984156A0A0G2JMH3 177 aa11.93□□□□□ -0.5
COPS3-212ENST00000539941 IGIPA6NJ69 53 aa11.93□□□□□ -0.5
COPS3-212ENST00000539941 ARL17AQ8IVW1 177 aa11.93□□□□□ -0.5
COPS3-212ENST00000539941 TGP01266 2768 aa11.92□□□□□ -0.5
COPS3-212ENST00000539941 SPART-AS1P0CW21 52 aa11.92□□□□□ -0.5
COPS3-212ENST00000539941 SMIM20Q8N5G0 67 aa11.92□□□□□ -0.5
COPS3-212ENST00000539941 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
COPS3-212ENST00000539941 RPL39P62891 51 aaKnown RBP11.91□□□□□ -0.5
COPS3-212ENST00000539941 DEFB104AQ8WTQ1 72 aa11.91□□□□□ -0.5
COPS3-212ENST00000539941 DEFB4AO15263 64 aa11.91□□□□□ -0.5
COPS3-212ENST00000539941 DAD1P61803 113 aa11.91□□□□□ -0.5
COPS3-212ENST00000539941 BAALCQ8WXS3 180 aa11.91□□□□□ -0.5
COPS3-212ENST00000539941 ANKRD29Q8N6D5 301 aa11.9□□□□□ -0.5
COPS3-212ENST00000539941 CHCHD7Q9BUK0 85 aa11.9□□□□□ -0.5
COPS3-212ENST00000539941 PRO0255Q9UI72 69 aa11.9□□□□□ -0.5
COPS3-212ENST00000539941 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
COPS3-212ENST00000539941 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
COPS3-212ENST00000539941 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
COPS3-212ENST00000539941 PAPPA-AS1Q5QFB9 102 aa11.89□□□□□ -0.51
COPS3-212ENST00000539941 SRSF9Q13242 221 aaKnown RBP eCLIP11.88□□□□□ -0.51
COPS3-212ENST00000539941 C11orf68Q9H3H3 251 aaKnown RBP11.88□□□□□ -0.51
COPS3-212ENST00000539941 CELA1Q9UNI1 258 aa11.88□□□□□ -0.51
COPS3-212ENST00000539941 ATP5G1P05496 136 aa11.87□□□□□ -0.51
COPS3-212ENST00000539941 NBEAL2Q6ZNJ1 2754 aa11.87□□□□□ -0.51
COPS3-212ENST00000539941 TCL1BO95988 128 aa11.87□□□□□ -0.51
COPS3-212ENST00000539941 HERVK_113P61574 105 aa11.87□□□□□ -0.51
COPS3-212ENST00000539941 PMVKQ15126 192 aa11.87□□□□□ -0.51
COPS3-212ENST00000539941 SCGB1D4Q6XE38 83 aa11.87□□□□□ -0.51
COPS3-212ENST00000539941 LOC100131303A0A0U1RQF7 123 aa11.86□□□□□ -0.51
COPS3-212ENST00000539941 SLC25A20O43772 301 aa11.86□□□□□ -0.51
COPS3-212ENST00000539941 RPL13AP40429 203 aaKnown RBP11.86□□□□□ -0.51
COPS3-212ENST00000539941 C10orf126Q8N4M7 172 aa11.86□□□□□ -0.51
COPS3-212ENST00000539941 ZNF815PA8K554 130 aa11.85□□□□□ -0.51
COPS3-212ENST00000539941 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
COPS3-212ENST00000539941 K7EIL1 84 aa11.85□□□□□ -0.51
COPS3-212ENST00000539941 TIMM21Q9BVV7 248 aa11.85□□□□□ -0.51
COPS3-212ENST00000539941 RETNQ9HD89 108 aa11.85□□□□□ -0.51
COPS3-212ENST00000539941 GYPEP15421 78 aa11.84□□□□□ -0.51
COPS3-212ENST00000539941 UBE2D4Q9Y2X8 147 aa11.84□□□□□ -0.51
COPS3-212ENST00000539941 IGLV4-3A0A075B6K6 122 aa11.83□□□□□ -0.52
COPS3-212ENST00000539941 TRAV8-4A0A0B4J246 113 aa11.83□□□□□ -0.52
COPS3-212ENST00000539941 PAX4O43316 350 aa11.83□□□□□ -0.52
COPS3-212ENST00000539941 NTM-AS1Q6ZSK4 140 aa11.83□□□□□ -0.52
COPS3-212ENST00000539941 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
COPS3-212ENST00000539941 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
COPS3-212ENST00000539941 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
COPS3-212ENST00000539941 H7C423 109 aa11.82□□□□□ -0.52
COPS3-212ENST00000539941 FAM240AA0A1B0GVK7 77 aa11.81□□□□□ -0.52
COPS3-212ENST00000539941 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
COPS3-212ENST00000539941 TMEM243Q9BU79 118 aa11.81□□□□□ -0.52
COPS3-212ENST00000539941 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
COPS3-212ENST00000539941 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
COPS3-212ENST00000539941 AMELXQ99217 191 aa11.81□□□□□ -0.52
COPS3-212ENST00000539941 TM2D3Q9BRN9 247 aa11.81□□□□□ -0.52
COPS3-212ENST00000539941 CSDC2Q9Y534 153 aaKnown RBP11.81□□□□□ -0.52
COPS3-212ENST00000539941 F5H768 121 aa11.8□□□□□ -0.52
COPS3-212ENST00000539941 ATXN8Q156A1 80 aa11.8□□□□□ -0.52
COPS3-212ENST00000539941 TRBV6-8A0A0A6YYG3 113 aa11.79□□□□□ -0.52
COPS3-212ENST00000539941 FAM104AQ969W3 186 aa11.79□□□□□ -0.52
COPS3-212ENST00000539941 VSIG2Q96IQ7 327 aa11.79□□□□□ -0.52
COPS3-212ENST00000539941 OPRPNQ99935 248 aaPredicted RBP11.79□□□□□ -0.52
COPS3-212ENST00000539941 IGLV4-69A0A075B6H9 119 aa11.78□□□□□ -0.52
COPS3-212ENST00000539941 C5orf47Q569G3 176 aa11.78□□□□□ -0.52
COPS3-212ENST00000539941 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
COPS3-212ENST00000539941 DGAT2L7PQ6IED9 249 aa11.78□□□□□ -0.52
COPS3-212ENST00000539941 A0A0B4J2C4 111 aa11.78□□□□□ -0.52
COPS3-212ENST00000539941 C9JAW5 83 aa11.78□□□□□ -0.52
COPS3-212ENST00000539941 UBE2L6O14933 153 aa11.78□□□□□ -0.52
COPS3-212ENST00000539941 IMUPQ9GZP8 106 aa11.78□□□□□ -0.52
COPS3-212ENST00000539941 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.77□□□□□ -0.53
COPS3-212ENST00000539941 A0A0J9YY99 117 aa11.77□□□□□ -0.53
COPS3-212ENST00000539941 CEMP1Q6PRD7 247 aaPredicted RBP11.77□□□□□ -0.53
COPS3-212ENST00000539941 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.53
COPS3-212ENST00000539941 TRBV7-7A0A0K0K1E9 115 aa11.76□□□□□ -0.53
COPS3-212ENST00000539941 IGHV3-30P01768 117 aa11.76□□□□□ -0.53
COPS3-212ENST00000539941 CFC1BP0CG36 223 aa11.76□□□□□ -0.53
COPS3-212ENST00000539941 CFC1P0CG37 223 aa11.76□□□□□ -0.53
COPS3-212ENST00000539941 IGHV3-30-5P0DP03 117 aa11.76□□□□□ -0.53
COPS3-212ENST00000539941 A0A0J9YWU9 116 aa11.75□□□□□ -0.53
COPS3-212ENST00000539941 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
COPS3-212ENST00000539941 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
COPS3-212ENST00000539941 HTN3P15516 51 aa11.75□□□□□ -0.53
COPS3-212ENST00000539941 H3BNG1 76 aa11.75□□□□□ -0.53
COPS3-212ENST00000539941 UBE2WQ96B02 151 aa11.75□□□□□ -0.53
COPS3-212ENST00000539941 LINC01620Q4KN68 170 aa11.74□□□□□ -0.53
COPS3-212ENST00000539941 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
COPS3-212ENST00000539941 ICOSQ9Y6W8 199 aa11.74□□□□□ -0.53
COPS3-212ENST00000539941 H3BT86 120 aa11.73□□□□□ -0.53
COPS3-212ENST00000539941 NTN5Q8WTR8 489 aaPredicted RBP11.73□□□□□ -0.53
COPS3-212ENST00000539941 PLEKHB2Q96CS7 222 aa11.73□□□□□ -0.53
COPS3-212ENST00000539941 ACYP1P07311 99 aa11.72□□□□□ -0.53
COPS3-212ENST00000539941 C11orf45Q8TAV5 145 aa11.72□□□□□ -0.53
COPS3-212ENST00000539941 CHCHD5Q9BSY4 110 aa11.72□□□□□ -0.53
COPS3-212ENST00000539941 CDC42SE2Q9NRR3 84 aa11.72□□□□□ -0.53
COPS3-212ENST00000539941 IGHV3-33P01772 117 aa11.71□□□□□ -0.53
COPS3-212ENST00000539941 TMEM170BQ5T4T1 132 aa11.71□□□□□ -0.53
COPS3-212ENST00000539941 Q6ZTC4 211 aa11.71□□□□□ -0.53
COPS3-212ENST00000539941 MRAPQ8TCY5 172 aa11.71□□□□□ -0.53
COPS3-212ENST00000539941 A0A0J9YXV3 536 aa11.71□□□□□ -0.54
COPS3-212ENST00000539941 A0A1B0GX51 115 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms