RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 RBX1P62877 108 aa15.52■□□□□ 0.07
HOMER3-204ENST00000539827 MRAPQ8TCY5 172 aa15.52■□□□□ 0.07
HOMER3-204ENST00000539827 GAGE10A6NGK3 116 aa15.51■□□□□ 0.07
HOMER3-204ENST00000539827 K7EP34 96 aa15.49■□□□□ 0.07
HOMER3-204ENST00000539827 NANOS2P60321 138 aaKnown RBP15.49■□□□□ 0.07
HOMER3-204ENST00000539827 SRSF9Q13242 221 aaKnown RBP eCLIP15.49■□□□□ 0.07
HOMER3-204ENST00000539827 C10orf126Q8N4M7 172 aa15.49■□□□□ 0.07
HOMER3-204ENST00000539827 RAB37Q96AX2 223 aa15.49■□□□□ 0.07
HOMER3-204ENST00000539827 A0A1B0GUV1 79 aa15.48■□□□□ 0.07
HOMER3-204ENST00000539827 A0A1W2PPM0 123 aa15.48■□□□□ 0.07
HOMER3-204ENST00000539827 KPRPQ5T749 579 aaPredicted RBP15.48■□□□□ 0.07
HOMER3-204ENST00000539827 NOTCH1P46531 2555 aa15.48■□□□□ 0.07
HOMER3-204ENST00000539827 SPATA25Q9BR10 227 aa15.47■□□□□ 0.07
HOMER3-204ENST00000539827 NDUFA12Q9UI09 145 aa15.47■□□□□ 0.07
HOMER3-204ENST00000539827 FABP2P12104 132 aa15.47■□□□□ 0.07
HOMER3-204ENST00000539827 NHP2Q9NX24 153 aaKnown RBP15.47■□□□□ 0.07
HOMER3-204ENST00000539827 DNHD1Q96M86 4753 aa15.47■□□□□ 0.07
HOMER3-204ENST00000539827 SMIM1B2RUZ4 78 aa15.46■□□□□ 0.07
HOMER3-204ENST00000539827 SH2D6Q7Z4S9 175 aa15.46■□□□□ 0.07
HOMER3-204ENST00000539827 Q8N3U1 123 aa15.46■□□□□ 0.07
HOMER3-204ENST00000539827 C11orf45Q8TAV5 145 aa15.46■□□□□ 0.07
HOMER3-204ENST00000539827 A0A0J9YXY3 114 aa15.45■□□□□ 0.06
HOMER3-204ENST00000539827 CLPSL2Q6UWE3 100 aa15.45■□□□□ 0.06
HOMER3-204ENST00000539827 IGLV5-39A0A0G2JS06 123 aa15.45■□□□□ 0.06
HOMER3-204ENST00000539827 LINC00959A0A1B0GUT2 108 aa15.45■□□□□ 0.06
HOMER3-204ENST00000539827 K7ERJ3 54 aa15.45■□□□□ 0.06
HOMER3-204ENST00000539827 TM2D3Q9BRN9 247 aa15.45■□□□□ 0.06
HOMER3-204ENST00000539827 SPANXB1Q9NS25 103 aaPredicted RBP15.45■□□□□ 0.06
HOMER3-204ENST00000539827 LELP1Q5T871 98 aa15.44■□□□□ 0.06
HOMER3-204ENST00000539827 ZFAND6Q6FIF0 208 aa15.44■□□□□ 0.06
HOMER3-204ENST00000539827 SPCS1Q9Y6A9 102 aa15.43■□□□□ 0.06
HOMER3-204ENST00000539827 TMEM238LA0A1B0GVL6 79 aa15.42■□□□□ 0.06
HOMER3-204ENST00000539827 A6NJY4 79 aa15.42■□□□□ 0.06
HOMER3-204ENST00000539827 LYPD5Q6UWN5 251 aa15.42■□□□□ 0.06
HOMER3-204ENST00000539827 NAA38Q9BRA0 125 aaKnown RBP15.42■□□□□ 0.06
HOMER3-204ENST00000539827 TENM3Q9P273 2699 aa15.42■□□□□ 0.06
HOMER3-204ENST00000539827 DEFB131BA0A096LNP1 70 aa15.4■□□□□ 0.06
HOMER3-204ENST00000539827 A0A1B0GWB2 263 aa15.4■□□□□ 0.06
HOMER3-204ENST00000539827 IGHV3-30P01768 117 aa15.4■□□□□ 0.06
HOMER3-204ENST00000539827 IGHV3-30-5P0DP03 117 aa15.4■□□□□ 0.06
HOMER3-204ENST00000539827 LINC00269Q8N2A0 174 aa15.4■□□□□ 0.06
HOMER3-204ENST00000539827 H3BNG1 76 aa15.4■□□□□ 0.06
HOMER3-204ENST00000539827 ANGP03950 147 aaKnown RBP15.4■□□□□ 0.06
HOMER3-204ENST00000539827 SS18Q15532 418 aa15.39■□□□□ 0.05
HOMER3-204ENST00000539827 C5orf38Q86SI9 138 aa15.39■□□□□ 0.05
HOMER3-204ENST00000539827 IGHV3OR16-9A0A0B4J2B5 98 aa15.38■□□□□ 0.05
HOMER3-204ENST00000539827 NDUFA1O15239 70 aa15.38■□□□□ 0.05
HOMER3-204ENST00000539827 TMEM238C9JI98 176 aa15.38■□□□□ 0.05
HOMER3-204ENST00000539827 XCL1P47992 114 aa15.37■□□□□ 0.05
HOMER3-204ENST00000539827 LITAFQ99732 161 aa15.37■□□□□ 0.05
HOMER3-204ENST00000539827 Q9H8V8 135 aa15.37■□□□□ 0.05
HOMER3-204ENST00000539827 CBY1Q9Y3M2 126 aa15.37■□□□□ 0.05
HOMER3-204ENST00000539827 IGLL5B9A064 214 aa15.36■□□□□ 0.05
HOMER3-204ENST00000539827 ADAMTSL4-AS1Q5T5F5 129 aa15.35■□□□□ 0.05
HOMER3-204ENST00000539827 MUSTN1Q8IVN3 82 aa15.35■□□□□ 0.05
HOMER3-204ENST00000539827 ZNF625Q96I27 306 aaPredicted RBP15.35■□□□□ 0.05
HOMER3-204ENST00000539827 NBEAL1Q6ZS30 2694 aa15.35■□□□□ 0.05
HOMER3-204ENST00000539827 REG3AQ06141 175 aa15.35■□□□□ 0.05
HOMER3-204ENST00000539827 A0A087WZ39 114 aa15.34■□□□□ 0.05
HOMER3-204ENST00000539827 KRTAP21-3Q3LHN1 58 aa15.34■□□□□ 0.05
HOMER3-204ENST00000539827 TOMM7Q9P0U1 55 aa15.34■□□□□ 0.05
HOMER3-204ENST00000539827 MGAM2Q2M2H8 2515 aa15.34■□□□□ 0.05
HOMER3-204ENST00000539827 HUWE1Q7Z6Z7 4374 aaKnown RBP15.34■□□□□ 0.05
HOMER3-204ENST00000539827 OCIAD2Q56VL3 154 aa15.33■□□□□ 0.05
HOMER3-204ENST00000539827 COX7B2Q8TF08 81 aa15.33■□□□□ 0.05
HOMER3-204ENST00000539827 IGLV10-54A0A075B6I4 117 aa15.32■□□□□ 0.04
HOMER3-204ENST00000539827 K7ERU9 68 aa15.31■□□□□ 0.04
HOMER3-204ENST00000539827 APOMO95445 188 aa15.31■□□□□ 0.04
HOMER3-204ENST00000539827 IGHV3-33P01772 117 aa15.31■□□□□ 0.04
HOMER3-204ENST00000539827 ESRGQ1W209 222 aa15.31■□□□□ 0.04
HOMER3-204ENST00000539827 PRSS2P07478 247 aa15.3■□□□□ 0.04
HOMER3-204ENST00000539827 NPC2P61916 151 aa15.3■□□□□ 0.04
HOMER3-204ENST00000539827 WFDC10BQ8IUB3 73 aa15.3■□□□□ 0.04
HOMER3-204ENST00000539827 CHCHD10Q8WYQ3 142 aaPredicted RBP15.3■□□□□ 0.04
HOMER3-204ENST00000539827 SPANXDQ9BXN6 97 aa15.3■□□□□ 0.04
HOMER3-204ENST00000539827 SPANXCQ9NY87 97 aa15.3■□□□□ 0.04
HOMER3-204ENST00000539827 KLK12Q9UKR0 248 aa15.3■□□□□ 0.04
HOMER3-204ENST00000539827 TRAV10A0A0B4J240 114 aa15.29■□□□□ 0.04
HOMER3-204ENST00000539827 A0A0U1RRA0 63 aa15.29■□□□□ 0.04
HOMER3-204ENST00000539827 A4D1N5 150 aa15.29■□□□□ 0.04
HOMER3-204ENST00000539827 TIMM17BO60830 172 aa15.29■□□□□ 0.04
HOMER3-204ENST00000539827 DAND5Q8N907 189 aa15.29■□□□□ 0.04
HOMER3-204ENST00000539827 MIAQ16674 131 aa15.28■□□□□ 0.04
HOMER3-204ENST00000539827 CFC1BP0CG36 223 aa15.27■□□□□ 0.03
HOMER3-204ENST00000539827 CFC1P0CG37 223 aa15.27■□□□□ 0.03
HOMER3-204ENST00000539827 RPL24P83731 157 aaKnown RBP15.27■□□□□ 0.03
HOMER3-204ENST00000539827 MEIG1Q5JSS6 88 aa15.27■□□□□ 0.03
HOMER3-204ENST00000539827 CD164L2Q6UWJ8 174 aa15.27■□□□□ 0.03
HOMER3-204ENST00000539827 CIRBPQ14011 172 aaKnown RBP15.26■□□□□ 0.03
HOMER3-204ENST00000539827 HERV-K104P63124 156 aa15.25■□□□□ 0.03
HOMER3-204ENST00000539827 LYRM7Q5U5X0 104 aa15.24■□□□□ 0.03
HOMER3-204ENST00000539827 ENHOQ6UWT2 76 aa15.24■□□□□ 0.03
HOMER3-204ENST00000539827 EIF4EBP3O60516 100 aaPredicted RBP15.24■□□□□ 0.03
HOMER3-204ENST00000539827 PRR34Q9NV39 138 aa15.24■□□□□ 0.03
HOMER3-204ENST00000539827 PGPEP1Q9NXJ5 209 aa15.24■□□□□ 0.03
HOMER3-204ENST00000539827 COX7A2LO14548 114 aa15.23■□□□□ 0.03
HOMER3-204ENST00000539827 LINC01561Q8N1V8 128 aa15.22■□□□□ 0.03
HOMER3-204ENST00000539827 GAGE12HA6NDE8 117 aa15.22■□□□□ 0.03
HOMER3-204ENST00000539827 FOXI1Q12951 378 aa15.22■□□□□ 0.03
HOMER3-204ENST00000539827 F8W1H4 67 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms